Cow genome map
| Conread name: | rpro33_l22.y1 |
| Conread position: | 9-440 |
| Cow position: | chr16:29983382-29983804 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 390, 131 |
| Conread position: | 9-577 |
| Cow position: | chr16:28437865-28437291 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 360 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 17, 28 |
| Conread position: | 9-579 |
| Cow position: | chr16:45798108-45798661 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 25 |
| Conread position: | 18-571 |
| Cow position: | chr16:29033592-29034141 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 372 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 34, 60 |
| Conread position: | 25-572 |
| Cow position: | chr16:8816561-8816015 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 7 |
| Conread position: | 36-460 |
| Cow position: | chr16:15566304-15566729 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 294 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 140, 24 |
| Conread position: | 36-553 |
| Cow position: | chr16:23982872-23983382 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 45 |
| Conread position: | 36-572 |
| Cow position: | chr16:407469-406942 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 24 |
| Conread position: | 36-572 |
| Cow position: | chr16:2727726-2727196 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 24 |
| Conread position: | 36-572 |
| Cow position: | chr16:10437803-10438328 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 31 |
| Conread position: | 36-572 |
| Cow position: | chr16:12538363-12537833 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 12 |
| Conread position: | 36-572 |
| Cow position: | chr16:26663311-26663841 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 12 |
| Conread position: | 36-572 |
| Cow position: | chr16:40296616-40296085 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 31 |
| Conread position: | 37-572 |
| Cow position: | chr16:2411406-2410875 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 31 |
| Conread position: | 62-577 |
| Cow position: | chr16:9930518-9931029 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 320 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 48, 57 |
| Conread position: | 79-579 |
| Cow position: | chr16:4302742-4302242 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 66 |
| Conread position: | 80-572 |
| Cow position: | chr16:41163464-41162980 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 22 |
| Conread position: | 81-444 |
| Cow position: | chr16:15184406-15184758 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 242 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 95, 28 |
| Conread position: | 84-572 |
| Cow position: | chr16:34529922-34530404 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 57 |
| Conread position: | 92-428 |
| Cow position: | chr16:5483933-5484268 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 230 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 84, 17 |
| Conread position: | 92-459 |
| Cow position: | chr16:23252892-23252526 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 252 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 84, 17 |
| Conread position: | 92-572 |
| Cow position: | chr16:2483526-2483048 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 17 |
| Conread position: | 105-572 |
| Cow position: | chr16:25170976-25171441 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 15 |
| Conread position: | 113-572 |
| Cow position: | chr16:1567822-1567361 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 30 |
| Conread position: | 114-572 |
| Cow position: | chr16:14666180-14665721 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 29 |
| Conread position: | 114-572 |
| Cow position: | chr16:28471469-28471010 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 29 |
| Conread position: | 114-572 |
| Cow position: | chr16:31592281-31591828 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 29 |
| Conread position: | 116-413 |
| Cow position: | chr16:47473205-47473507 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 197 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 195, 27 |
| Conread position: | 116-572 |
| Cow position: | chr16:10375950-10375507 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 297 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 60, 27 |
| Conread position: | 121-579 |
| Cow position: | chr16:5661483-5661942 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 303 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 55, 22 |
| Conread position: | 121-579 |
| Cow position: | chr16:25085281-25085715 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 296 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 277, 22 |
| Conread position: | 121-579 |
| Cow position: | chr16:28170731-28170273 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 22 |
| Conread position: | 122-572 |
| Cow position: | chr16:29090641-29090196 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 296 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 77, 21 |
| Conread position: | 132-459 |
| Cow position: | chr16:15492879-15493210 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 44, 11 |
| Conread position: | 140-572 |
| Cow position: | chr16:10203781-10203350 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 32 |
| Conread position: | 161-571 |
| Cow position: | chr16:4479305-4478892 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 280 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 15, 11 |
| Conread position: | 162-572 |
| Cow position: | chr16:28197998-28197586 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 269 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 120, 9 |
| Conread position: | 175-572 |
| Cow position: | chr16:15476535-15476933 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 260 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 136, 141 |
| Conread position: | 196-572 |
| Cow position: | chr16:27734064-27733700 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 252 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 9, 88 |
| Conread position: | 197-577 |
| Cow position: | chr16:30049211-30049581 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 268 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 198, 26 |
| Conread position: | 207-577 |
| Cow position: | chr16:1431910-1432283 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 253 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 79, 250 |
| Conread position: | 219-577 |
| Cow position: | chr16:37456289-37455915 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 246 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 75, 44 |
| Conread position: | 233-572 |
| Cow position: | chr16:43852368-43852044 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 80, 45 |
| Conread position: | 299-579 |
| Cow position: | chr16:11283125-11283408 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 193 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 61, 180 |
| Conread position: | 299-579 |
| Cow position: | chr16:28377033-28377316 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 61, 179 |
| Conread position: | 315-572 |
| Cow position: | chr16:26374425-26374684 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 80, 45 |
| Conread position: | 315-572 |
| Cow position: | chr16:41166934-41166679 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 93, 36 |
| Conread position: | 331-579 |
| Cow position: | chr16:52592249-52592004 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 192 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 69, 5 |
Show alignments to all cow chromosomes.