Cow genome map
| Conread name: | rpro33_l22.y1 |
| Conread position: | 4-497 |
| Cow position: | chr17:11026706-11026211 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 245, 5 |
| Conread position: | 9-572 |
| Cow position: | chr17:1657726-1657185 (view UCSC Genome Browser custom track) |
| Alignm length: | 570 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 399, 60 |
| Conread position: | 9-572 |
| Cow position: | chr17:6076294-6076873 (view UCSC Genome Browser custom track) |
| Alignm length: | 588 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 37 |
| Conread position: | 18-572 |
| Cow position: | chr17:18300280-18299732 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 74 |
| Conread position: | 32-572 |
| Cow position: | chr17:19019704-19020235 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 328, 41 |
| Conread position: | 36-337 |
| Cow position: | chr17:19269226-19268935 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 201 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 140, 12 |
| Conread position: | 36-436 |
| Cow position: | chr17:15850537-15850933 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 265 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 140, 31 |
| Conread position: | 36-572 |
| Cow position: | chr17:2579755-2580285 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 31 |
| Conread position: | 36-572 |
| Cow position: | chr17:18103545-18103024 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 275, 12 |
| Conread position: | 36-577 |
| Cow position: | chr17:3642696-3642164 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 22 |
| Conread position: | 37-572 |
| Cow position: | chr17:22132369-22132892 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 11 |
| Conread position: | 37-577 |
| Cow position: | chr17:14040905-14040365 (view UCSC Genome Browser custom track) |
| Alignm length: | 551 |
| Alignm identity: | 347 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 24, 17 |
| Conread position: | 37-577 |
| Cow position: | chr17:20087606-20087082 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 25 |
| Conread position: | 40-579 |
| Cow position: | chr17:38873752-38874299 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 321, 100 |
| Conread position: | 53-572 |
| Cow position: | chr17:15143226-15142695 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 340 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 56, 44 |
| Conread position: | 53-572 |
| Cow position: | chr17:23324313-23323790 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 44 |
| Conread position: | 71-572 |
| Cow position: | chr17:11087553-11087059 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 13 |
| Conread position: | 71-572 |
| Cow position: | chr17:40804989-40805472 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 328 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 105, 13 |
| Conread position: | 75-556 |
| Cow position: | chr17:3708601-3708128 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 320 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 286, 15 |
| Conread position: | 78-572 |
| Cow position: | chr17:17130025-17130530 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 321 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 98, 65 |
| Conread position: | 79-571 |
| Cow position: | chr17:31767872-31767379 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 66 |
| Conread position: | 79-572 |
| Cow position: | chr17:15435958-15436455 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 322 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 38, 66 |
| Conread position: | 80-572 |
| Cow position: | chr17:14216853-14216370 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 28 |
| Conread position: | 80-577 |
| Cow position: | chr17:250336-250831 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 332 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 34, 26 |
| Conread position: | 81-572 |
| Cow position: | chr17:24029819-24029341 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 28 |
| Conread position: | 84-572 |
| Cow position: | chr17:15156792-15156306 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 309 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 17, 60 |
| Conread position: | 92-577 |
| Cow position: | chr17:6260035-6260525 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 17 |
| Conread position: | 105-553 |
| Cow position: | chr17:151676-151229 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 32 |
| Conread position: | 121-558 |
| Cow position: | chr17:5226834-5227270 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 290 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 55, 22 |
| Conread position: | 121-572 |
| Cow position: | chr17:16857307-16856855 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 22 |
| Conread position: | 121-572 |
| Cow position: | chr17:34156339-34156781 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 297 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 55, 22 |
| Conread position: | 121-579 |
| Cow position: | chr17:1382603-1382148 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 303 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 55, 22 |
| Conread position: | 207-559 |
| Cow position: | chr17:9081144-9080789 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 238 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 84, 78 |
| Conread position: | 221-577 |
| Cow position: | chr17:6001135-6000773 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 241 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 59, 82 |
| Conread position: | 244-579 |
| Cow position: | chr17:2247735-2247399 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 41, 55 |
| Conread position: | 299-559 |
| Cow position: | chr17:11783235-11783495 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 61, 176 |
| Conread position: | 325-572 |
| Cow position: | chr17:19268417-19268166 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 36, 153 |
| Conread position: | 333-579 |
| Cow position: | chr17:20081435-20081196 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 28, 78 |
| Conread position: | 355-579 |
| Cow position: | chr17:21417454-21417681 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 166 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 45, 92 |
Show alignments to all cow chromosomes.