Cow genome map
| Conread name: | rpro33_l22.y1 |
| Conread position: | 9-577 |
| Cow position: | chr21:21915084-21915645 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 33 |
| Conread position: | 10-572 |
| Cow position: | chr21:23602949-23603491 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 38 |
| Conread position: | 11-397 |
| Cow position: | chr21:1689830-1689441 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 74 |
| Conread position: | 13-571 |
| Cow position: | chr21:40271280-40270723 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 19 |
| Conread position: | 18-577 |
| Cow position: | chr21:23861728-23862277 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 231, 36 |
| Conread position: | 36-572 |
| Cow position: | chr21:2883321-2882788 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 31 |
| Conread position: | 36-572 |
| Cow position: | chr21:10567096-10567627 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 12 |
| Conread position: | 36-572 |
| Cow position: | chr21:35144184-35144712 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 31 |
| Conread position: | 38-572 |
| Cow position: | chr21:146352-146879 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 29 |
| Conread position: | 39-579 |
| Cow position: | chr21:21944316-21943805 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 108 |
| Conread position: | 40-579 |
| Cow position: | chr21:12055578-12055045 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 6 |
| Conread position: | 53-572 |
| Cow position: | chr21:11506025-11506547 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 340 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 64, 92 |
| Conread position: | 66-415 |
| Cow position: | chr21:49324762-49325108 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 249 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 31, 18 |
| Conread position: | 80-414 |
| Cow position: | chr21:7267070-7266739 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 20, 66 |
| Conread position: | 80-572 |
| Cow position: | chr21:2416681-2417165 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 325 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 231, 29 |
| Conread position: | 80-572 |
| Cow position: | chr21:39425524-39426013 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 319 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 97, 28 |
| Conread position: | 81-572 |
| Cow position: | chr21:3779235-3779718 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 318 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 72, 28 |
| Conread position: | 92-572 |
| Cow position: | chr21:10850556-10851030 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 17 |
| Conread position: | 99-577 |
| Cow position: | chr21:4093983-4094460 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 196, 44 |
| Conread position: | 101-572 |
| Cow position: | chr21:4589506-4589044 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 303 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 75, 41 |
| Conread position: | 106-558 |
| Cow position: | chr21:2540594-2540155 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 294 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 70, 27 |
| Conread position: | 112-577 |
| Cow position: | chr21:39087499-39087959 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 248, 34 |
| Conread position: | 116-577 |
| Cow position: | chr21:37148532-37148988 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 298 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 74, 12 |
| Conread position: | 121-436 |
| Cow position: | chr21:27070762-27070442 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 55, 22 |
| Conread position: | 121-572 |
| Cow position: | chr21:1287719-1287268 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 299 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 56, 22 |
| Conread position: | 121-572 |
| Cow position: | chr21:13313271-13313713 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 287 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 55, 22 |
| Conread position: | 121-572 |
| Cow position: | chr21:30599422-30598971 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 22 |
| Conread position: | 121-572 |
| Cow position: | chr21:47949565-47950011 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 304 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 56, 22 |
| Conread position: | 121-579 |
| Cow position: | chr21:4077336-4077794 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 308 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 55, 22 |
| Conread position: | 121-579 |
| Cow position: | chr21:11453157-11452700 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 22 |
| Conread position: | 121-579 |
| Cow position: | chr21:37046119-37046579 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 22 |
| Conread position: | 122-520 |
| Cow position: | chr21:28735736-28736136 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 270 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 189, 21 |
| Conread position: | 122-572 |
| Cow position: | chr21:47941359-47941808 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 21 |
| Conread position: | 124-577 |
| Cow position: | chr21:2711006-2711445 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 301 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 52, 19 |
| Conread position: | 196-572 |
| Cow position: | chr21:26637624-26637253 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 239 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 164, 92 |
| Conread position: | 250-572 |
| Cow position: | chr21:18817933-18817604 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 61, 66 |
| Conread position: | 255-577 |
| Cow position: | chr21:25782273-25782598 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 105, 42 |
| Conread position: | 267-528 |
| Cow position: | chr21:21024348-21024607 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 95, 74 |
| Conread position: | 300-572 |
| Cow position: | chr21:5840589-5840314 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 11, 16 |
| Conread position: | 322-572 |
| Cow position: | chr21:217751-218004 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 179 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 40, 58 |
Show alignments to all cow chromosomes.