Cow genome map
| Conread name: | rpro33_l22.y1 |
| Conread position: | 32-233 |
| Cow position: | chr22:12554374-12554184 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 32-418 |
| Cow position: | chr22:9276784-9277168 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 265 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 18, 73 |
| Conread position: | 36-571 |
| Cow position: | chr22:18816131-18815603 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 31 |
| Conread position: | 36-571 |
| Cow position: | chr22:44396697-44397224 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 12 |
| Conread position: | 36-572 |
| Cow position: | chr22:560450-559924 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 12 |
| Conread position: | 36-572 |
| Cow position: | chr22:31313594-31314124 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 31 |
| Conread position: | 36-572 |
| Cow position: | chr22:31334783-31334257 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 275, 31 |
| Conread position: | 36-572 |
| Cow position: | chr22:42991427-42991957 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 12 |
| Conread position: | 38-570 |
| Cow position: | chr22:36184013-36184533 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 351 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 319, 22 |
| Conread position: | 39-577 |
| Cow position: | chr22:11032005-11032534 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 349 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 256, 15 |
| Conread position: | 45-572 |
| Cow position: | chr22:3278102-3277581 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 39 |
| Conread position: | 48-435 |
| Cow position: | chr22:17328477-17328090 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 262 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 9, 37 |
| Conread position: | 53-572 |
| Cow position: | chr22:24950352-24950875 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 340 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 56, 44 |
| Conread position: | 79-573 |
| Cow position: | chr22:35672074-35671576 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 319 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 30, 18 |
| Conread position: | 80-579 |
| Cow position: | chr22:35907099-35906618 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 315 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 96, 33 |
| Conread position: | 81-572 |
| Cow position: | chr22:1520719-1520242 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 230, 28 |
| Conread position: | 92-572 |
| Cow position: | chr22:44934283-44934762 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 17 |
| Conread position: | 106-572 |
| Cow position: | chr22:5940974-5940531 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 303 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 68, 37 |
| Conread position: | 114-572 |
| Cow position: | chr22:34168656-34169116 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 29 |
| Conread position: | 117-571 |
| Cow position: | chr22:12731347-12730905 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 294 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 59, 26 |
| Conread position: | 121-392 |
| Cow position: | chr22:1269461-1269194 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 55, 22 |
| Conread position: | 121-571 |
| Cow position: | chr22:693949-694398 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 292 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 55, 22 |
| Conread position: | 121-572 |
| Cow position: | chr22:5232956-5232502 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 22 |
| Conread position: | 121-572 |
| Cow position: | chr22:18027605-18028059 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 302 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 55, 22 |
| Conread position: | 121-572 |
| Cow position: | chr22:27284358-27284804 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 22 |
| Conread position: | 121-572 |
| Cow position: | chr22:36861201-36860752 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 22 |
| Conread position: | 121-572 |
| Cow position: | chr22:44369299-44368849 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 298 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 55, 22 |
| Conread position: | 121-579 |
| Cow position: | chr22:10909507-10909052 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 239, 22 |
| Conread position: | 121-579 |
| Cow position: | chr22:20240516-20240058 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 308 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 55, 26 |
| Conread position: | 132-572 |
| Cow position: | chr22:15313612-15313174 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 179, 9 |
| Conread position: | 174-579 |
| Cow position: | chr22:14629795-14630203 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 277 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 186, 299 |
| Conread position: | 222-572 |
| Cow position: | chr22:44491459-44491811 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 228 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 138, 255 |
| Conread position: | 305-577 |
| Cow position: | chr22:41239885-41240156 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 181 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 56, 166 |
| Conread position: | 321-579 |
| Cow position: | chr22:11804533-11804272 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 39, 144 |
| Conread position: | 331-571 |
| Cow position: | chr22:9287122-9287362 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 169 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 28, 147 |
Show alignments to all cow chromosomes.