Cow genome map
| Conread name: | rpro33_l22.y1 |
| Conread position: | 9-577 |
| Cow position: | chr29:8062258-8061697 (view UCSC Genome Browser custom track) |
| Alignm length: | 585 |
| Alignm identity: | 369 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 17, 56 |
| Conread position: | 9-579 |
| Cow position: | chr29:3177344-3176802 (view UCSC Genome Browser custom track) |
| Alignm length: | 578 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 352, 27 |
| Conread position: | 17-139 |
| Cow position: | chr29:4056810-4056931 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 19-553 |
| Cow position: | chr29:16016528-16016006 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 337 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 157, 24 |
| Conread position: | 34-572 |
| Cow position: | chr29:34799549-34799015 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 24 |
| Conread position: | 36-572 |
| Cow position: | chr29:2100110-2100639 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 345 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 140, 12 |
| Conread position: | 36-572 |
| Cow position: | chr29:2690165-2690696 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 12 |
| Conread position: | 36-572 |
| Cow position: | chr29:10647986-10647461 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 12 |
| Conread position: | 36-572 |
| Cow position: | chr29:25932279-25931751 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 18 |
| Conread position: | 36-572 |
| Cow position: | chr29:26164557-26164037 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 12 |
| Conread position: | 36-572 |
| Cow position: | chr29:38227245-38227768 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 31 |
| Conread position: | 36-572 |
| Cow position: | chr29:43322819-43323349 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 31 |
| Conread position: | 36-577 |
| Cow position: | chr29:7430954-7430424 (view UCSC Genome Browser custom track) |
| Alignm length: | 551 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 28 |
| Conread position: | 36-577 |
| Cow position: | chr29:16022795-16023333 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 12 |
| Conread position: | 47-413 |
| Cow position: | chr29:45587094-45586732 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 242 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 129, 16 |
| Conread position: | 50-579 |
| Cow position: | chr29:669790-669262 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 59 |
| Conread position: | 51-572 |
| Cow position: | chr29:39079434-39078916 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 10 |
| Conread position: | 80-572 |
| Cow position: | chr29:27250044-27249554 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 22 |
| Conread position: | 80-579 |
| Cow position: | chr29:34925777-34926274 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 329 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 96, 28 |
| Conread position: | 81-572 |
| Cow position: | chr29:2841067-2840588 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 327 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 230, 28 |
| Conread position: | 81-572 |
| Cow position: | chr29:10823663-10823184 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 230, 28 |
| Conread position: | 81-572 |
| Cow position: | chr29:40502678-40502188 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 28 |
| Conread position: | 84-577 |
| Cow position: | chr29:5982408-5981919 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 326 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 8, 30 |
| Conread position: | 92-570 |
| Cow position: | chr29:9961603-9962073 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 305 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 209, 51 |
| Conread position: | 92-572 |
| Cow position: | chr29:20251475-20251954 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 17 |
| Conread position: | 93-566 |
| Cow position: | chr29:251080-251558 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 67 |
| Conread position: | 113-572 |
| Cow position: | chr29:45460049-45460511 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 30 |
| Conread position: | 114-397 |
| Cow position: | chr29:42802461-42802744 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 62, 29 |
| Conread position: | 114-530 |
| Cow position: | chr29:48137-47720 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 284 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 62, 29 |
| Conread position: | 114-572 |
| Cow position: | chr29:14586251-14586710 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 29 |
| Conread position: | 117-577 |
| Cow position: | chr29:21426691-21426230 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 24 |
| Conread position: | 121-309 |
| Cow position: | chr29:410183-409997 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 55, 20 |
| Conread position: | 121-513 |
| Cow position: | chr29:105369-105766 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 268 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 55, 22 |
| Conread position: | 121-555 |
| Cow position: | chr29:35297205-35297621 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 281 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 55, 50 |
| Conread position: | 121-572 |
| Cow position: | chr29:610276-609834 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 298 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 55, 22 |
| Conread position: | 121-572 |
| Cow position: | chr29:9643415-9642972 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 297 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 175, 23 |
| Conread position: | 121-572 |
| Cow position: | chr29:15968525-15968072 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 22 |
| Conread position: | 121-577 |
| Cow position: | chr29:5957942-5958397 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 23 |
| Conread position: | 121-579 |
| Cow position: | chr29:15894514-15894054 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 22 |
| Conread position: | 122-572 |
| Cow position: | chr29:14085791-14085337 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 226, 20 |
| Conread position: | 123-526 |
| Cow position: | chr29:32584039-32583634 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 266 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 69, 48 |
| Conread position: | 150-572 |
| Cow position: | chr29:35263067-35263477 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 282 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 13, 38 |
| Conread position: | 162-577 |
| Cow position: | chr29:3698373-3698795 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 214 |
| Conread position: | 169-579 |
| Cow position: | chr29:31181788-31182200 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 267 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 126, 131 |
| Conread position: | 190-415 |
| Cow position: | chr29:4057320-4057544 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 165, 64 |
| Conread position: | 219-579 |
| Cow position: | chr29:32559322-32558958 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 240 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 76, 81 |
| Conread position: | 259-572 |
| Cow position: | chr29:16173854-16173541 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 207 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 102, 176 |
| Conread position: | 278-572 |
| Cow position: | chr29:32803934-32804228 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 82, 198 |
| Conread position: | 344-572 |
| Cow position: | chr29:6265715-6265485 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 64, 133 |
Show alignments to all cow chromosomes.