Cow genome map
| Conread name: | rpro33_l22.y1 |
| Conread position: | 9-513 |
| Cow position: | chr7:62441043-62440528 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 39 |
| Conread position: | 9-579 |
| Cow position: | chr7:7211710-7211151 (view UCSC Genome Browser custom track) |
| Alignm length: | 577 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 132 |
| Conread position: | 16-577 |
| Cow position: | chr7:26851953-26852519 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 373 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 47, 13 |
| Conread position: | 36-427 |
| Cow position: | chr7:34149412-34149798 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 264 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 140, 31 |
| Conread position: | 36-436 |
| Cow position: | chr7:68232254-68232635 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 269 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 140, 12 |
| Conread position: | 36-572 |
| Cow position: | chr7:1372338-1371807 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 31 |
| Conread position: | 36-572 |
| Cow position: | chr7:10431104-10430580 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 325, 12 |
| Conread position: | 36-572 |
| Cow position: | chr7:14139287-14138758 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 31 |
| Conread position: | 36-572 |
| Cow position: | chr7:21127349-21126824 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 275, 12 |
| Conread position: | 36-572 |
| Cow position: | chr7:21234698-21234175 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 12 |
| Conread position: | 36-572 |
| Cow position: | chr7:21985713-21986265 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 361 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 24, 12 |
| Conread position: | 36-572 |
| Cow position: | chr7:39792069-39792608 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 31 |
| Conread position: | 38-572 |
| Cow position: | chr7:51014582-51015103 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 354 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 138, 35 |
| Conread position: | 40-559 |
| Cow position: | chr7:67812862-67813378 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 336 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 17, 111 |
| Conread position: | 40-577 |
| Cow position: | chr7:7294362-7293818 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 327 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 52, 169 |
| Conread position: | 45-559 |
| Cow position: | chr7:21320469-21320981 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 250, 39 |
| Conread position: | 45-579 |
| Cow position: | chr7:61808542-61809077 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 13 |
| Conread position: | 53-572 |
| Cow position: | chr7:11446871-11447397 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 341 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 64, 92 |
| Conread position: | 80-334 |
| Cow position: | chr7:38536751-38537001 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 96, 28 |
| Conread position: | 80-554 |
| Cow position: | chr7:61559560-61560033 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 314 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 96, 22 |
| Conread position: | 80-570 |
| Cow position: | chr7:20799099-20798607 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 335 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 42, 22 |
| Conread position: | 80-579 |
| Cow position: | chr7:20515425-20514931 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 215, 28 |
| Conread position: | 81-329 |
| Cow position: | chr7:19924472-19924223 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 95, 28 |
| Conread position: | 81-572 |
| Cow position: | chr7:33405887-33405402 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 28 |
| Conread position: | 81-572 |
| Cow position: | chr7:67799205-67799673 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 319 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 339, 28 |
| Conread position: | 86-572 |
| Cow position: | chr7:38397167-38397653 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 57 |
| Conread position: | 92-568 |
| Cow position: | chr7:53365367-53364906 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 296 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 126, 51 |
| Conread position: | 101-572 |
| Cow position: | chr7:25250469-25250944 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 320 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 71, 42 |
| Conread position: | 101-579 |
| Cow position: | chr7:994888-995361 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 42 |
| Conread position: | 105-548 |
| Cow position: | chr7:27127713-27128145 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 292 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 69, 41 |
| Conread position: | 111-572 |
| Cow position: | chr7:27584343-27583880 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 309 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 85, 32 |
| Conread position: | 113-579 |
| Cow position: | chr7:45948768-45948296 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 30 |
| Conread position: | 114-572 |
| Cow position: | chr7:24808073-24807617 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 221, 29 |
| Conread position: | 114-572 |
| Cow position: | chr7:60460069-60459607 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 307 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 148, 29 |
| Conread position: | 117-572 |
| Cow position: | chr7:59679235-59679686 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 302 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 46, 30 |
| Conread position: | 121-558 |
| Cow position: | chr7:7257578-7257998 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 287 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 240, 22 |
| Conread position: | 121-572 |
| Cow position: | chr7:16487-16035 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 22 |
| Conread position: | 121-572 |
| Cow position: | chr7:8144853-8144402 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 190, 22 |
| Conread position: | 121-572 |
| Cow position: | chr7:29470851-29471297 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 303 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 190, 23 |
| Conread position: | 121-579 |
| Cow position: | chr7:23836956-23837417 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 190, 22 |
| Conread position: | 121-579 |
| Cow position: | chr7:60794917-60794456 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 22 |
| Conread position: | 123-571 |
| Cow position: | chr7:55537527-55537082 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 20 |
| Conread position: | 138-556 |
| Cow position: | chr7:68333391-68333805 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 278 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 38, 34 |
| Conread position: | 141-572 |
| Cow position: | chr7:21929551-21929988 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 289 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 36, 31 |
| Conread position: | 144-579 |
| Cow position: | chr7:21853415-21852986 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 291 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 50, 28 |
| Conread position: | 162-568 |
| Cow position: | chr7:39555031-39554636 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 255 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 146, 32 |
| Conread position: | 167-572 |
| Cow position: | chr7:27101866-27101456 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 5, 313 |
| Conread position: | 266-572 |
| Cow position: | chr7:15810947-15810620 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 221 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 45, 22 |
| Conread position: | 274-577 |
| Cow position: | chr7:57564548-57564249 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 201 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 75, 27 |
| Conread position: | 299-572 |
| Cow position: | chr7:63555524-63555796 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 194 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 74, 66 |
| Conread position: | 324-572 |
| Cow position: | chr7:61578042-61578293 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 177 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 37, 154 |
| Conread position: | 368-572 |
| Cow position: | chr7:1610084-1609874 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 39, 0 |
Show alignments to all cow chromosomes.