Cow genome map
| Conread name: | rpro33_l22.y1 |
| Conread position: | 9-572 |
| Cow position: | chr8:47361602-47361032 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 37 |
| Conread position: | 10-577 |
| Cow position: | chr8:47081319-47081896 (view UCSC Genome Browser custom track) |
| Alignm length: | 590 |
| Alignm identity: | 373 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 183, 122 |
| Conread position: | 24-572 |
| Cow position: | chr8:42419953-42419411 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 363 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 17, 86 |
| Conread position: | 26-572 |
| Cow position: | chr8:12449430-12449979 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 87 |
| Conread position: | 36-536 |
| Cow position: | chr8:19330237-19330730 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 275, 22 |
| Conread position: | 36-545 |
| Cow position: | chr8:36636043-36635543 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 12 |
| Conread position: | 36-571 |
| Cow position: | chr8:14591401-14590877 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 275, 10 |
| Conread position: | 36-571 |
| Cow position: | chr8:25522900-25523432 (view UCSC Genome Browser custom track) |
| Alignm length: | 551 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 12 |
| Conread position: | 36-572 |
| Cow position: | chr8:5016682-5017205 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 31 |
| Conread position: | 36-572 |
| Cow position: | chr8:19050977-19051502 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 11 |
| Conread position: | 36-572 |
| Cow position: | chr8:39195716-39195184 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 12 |
| Conread position: | 36-572 |
| Cow position: | chr8:42484413-42484942 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 275, 31 |
| Conread position: | 36-572 |
| Cow position: | chr8:60060881-60061409 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 325, 31 |
| Conread position: | 36-579 |
| Cow position: | chr8:8911001-8911540 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 72 |
| Conread position: | 38-309 |
| Cow position: | chr8:8229278-8229016 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 138, 25 |
| Conread position: | 38-571 |
| Cow position: | chr8:25776170-25775648 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 10 |
| Conread position: | 45-559 |
| Cow position: | chr8:1348735-1348220 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 338 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 31, 21 |
| Conread position: | 45-579 |
| Cow position: | chr8:6683947-6684479 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 13 |
| Conread position: | 45-579 |
| Cow position: | chr8:15711916-15711384 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 350 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 31, 13 |
| Conread position: | 45-579 |
| Cow position: | chr8:34348178-34348706 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 348 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 33, 13 |
| Conread position: | 53-559 |
| Cow position: | chr8:6065266-6064762 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 323 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 64, 92 |
| Conread position: | 53-572 |
| Cow position: | chr8:30891813-30891290 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 92 |
| Conread position: | 76-560 |
| Cow position: | chr8:10748896-10749378 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 322 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 200, 15 |
| Conread position: | 80-572 |
| Cow position: | chr8:47661784-47661294 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 29 |
| Conread position: | 81-572 |
| Cow position: | chr8:24915800-24915310 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 28 |
| Conread position: | 84-572 |
| Cow position: | chr8:11969736-11969257 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 314 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 276, 16 |
| Conread position: | 90-572 |
| Cow position: | chr8:7161442-7161923 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 19 |
| Conread position: | 92-572 |
| Cow position: | chr8:4686948-4687428 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 17 |
| Conread position: | 114-571 |
| Cow position: | chr8:23771206-23771662 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 29 |
| Conread position: | 114-572 |
| Cow position: | chr8:3856443-3855989 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 29 |
| Conread position: | 114-572 |
| Cow position: | chr8:11802392-11802847 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 306 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 62, 29 |
| Conread position: | 114-572 |
| Cow position: | chr8:25408295-25408756 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 29 |
| Conread position: | 114-572 |
| Cow position: | chr8:30487814-30487356 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 296 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 172, 27 |
| Conread position: | 114-572 |
| Cow position: | chr8:49215006-49215467 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 29 |
| Conread position: | 114-572 |
| Cow position: | chr8:50288355-50287898 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 29 |
| Conread position: | 114-577 |
| Cow position: | chr8:34108414-34108888 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 302 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 58, 29 |
| Conread position: | 114-579 |
| Cow position: | chr8:8401544-8401082 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 29 |
| Conread position: | 114-579 |
| Cow position: | chr8:33588946-33589408 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 197, 29 |
| Conread position: | 117-571 |
| Cow position: | chr8:38606624-38606176 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 26 |
| Conread position: | 118-573 |
| Cow position: | chr8:50930555-50930103 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 25 |
| Conread position: | 121-459 |
| Cow position: | chr8:38390945-38391285 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 234 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 55, 22 |
| Conread position: | 121-572 |
| Cow position: | chr8:1319616-1320068 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 306 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 58, 26 |
| Conread position: | 121-572 |
| Cow position: | chr8:2886323-2886773 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 300 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 55, 22 |
| Conread position: | 121-572 |
| Cow position: | chr8:8556576-8556122 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 301 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 42, 22 |
| Conread position: | 121-572 |
| Cow position: | chr8:22571738-22571284 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 306 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 55, 22 |
| Conread position: | 121-572 |
| Cow position: | chr8:32437508-32437059 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 299 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 239, 22 |
| Conread position: | 121-572 |
| Cow position: | chr8:32631455-32631002 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 239, 22 |
| Conread position: | 121-577 |
| Cow position: | chr8:2170800-2170342 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 22 |
| Conread position: | 121-577 |
| Cow position: | chr8:17311598-17312054 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 190, 18 |
| Conread position: | 121-579 |
| Cow position: | chr8:8518011-8517554 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 22 |
| Conread position: | 121-579 |
| Cow position: | chr8:37931663-37932123 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 22 |
| Conread position: | 133-572 |
| Cow position: | chr8:11762529-11762965 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 282 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 43, 13 |
| Conread position: | 140-579 |
| Cow position: | chr8:21158243-21157812 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 291 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 39, 32 |
| Conread position: | 183-572 |
| Cow position: | chr8:46050822-46051213 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 98 |
| Conread position: | 204-579 |
| Cow position: | chr8:8308251-8308627 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 266 |
| Conread position: | 219-572 |
| Cow position: | chr8:25376430-25376786 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 232 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 141, 272 |
| Conread position: | 247-579 |
| Cow position: | chr8:59141023-59141356 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 226 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 33, 232 |
| Conread position: | 258-566 |
| Cow position: | chr8:28878387-28878085 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 102, 198 |
| Conread position: | 299-579 |
| Cow position: | chr8:19590882-19591165 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 61, 179 |
| Conread position: | 303-577 |
| Cow position: | chr8:35212640-35212914 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 10, 30 |
| Conread position: | 332-577 |
| Cow position: | chr8:25437054-25437297 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 34, 19 |
| Conread position: | 338-577 |
| Cow position: | chr8:11564322-11564568 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 23, 40 |
Show alignments to all cow chromosomes.