Cow genome map

Conread name: rpro33_l22.y1

Conread position: 9-546
Cow position:
Alignm length: 554
Alignm identity: 350
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 72, 45

Conread position: 9-572
Cow position:
Alignm length: 577
Alignm identity: 371
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 176, 28

Conread position: 18-571
Cow position:
Alignm length: 563
Alignm identity: 352
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 13, 52

Conread position: 18-572
Cow position:
Alignm length: 570
Alignm identity: 356
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 166, 40

Conread position: 19-579
Cow position:
Alignm length: 570
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 17

Conread position: 23-330
Cow position:
Alignm length: 313
Alignm identity: 211
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 148, 120

Conread position: 29-579
Cow position:
Alignm length: 560
Alignm identity: 331
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 147, 79

Conread position: 36-572
Cow position:
Alignm length: 545
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 275, 31

Conread position: 36-572
Cow position:
Alignm length: 542
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 12

Conread position: 36-572
Cow position:
Alignm length: 548
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 8

Conread position: 36-572
Cow position:
Alignm length: 545
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 31

Conread position: 36-573
Cow position:
Alignm length: 547
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 12

Conread position: 38-339
Cow position:
Alignm length: 305
Alignm identity: 196
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 32, 69

Conread position: 38-352
Cow position:
Alignm length: 328
Alignm identity: 226
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 134, 102

Conread position: 39-572
Cow position:
Alignm length: 548
Alignm identity: 352
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 225, 81

Conread position: 40-572
Cow position:
Alignm length: 550
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 6

Conread position: 45-572
Cow position:
Alignm length: 537
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 39

Conread position: 49-571
Cow position:
Alignm length: 534
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 262, 49

Conread position: 50-572
Cow position:
Alignm length: 531
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 58

Conread position: 51-579
Cow position:
Alignm length: 538
Alignm identity: 346
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 53, 99

Conread position: 53-572
Cow position:
Alignm length: 529
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 92

Conread position: 53-579
Cow position:
Alignm length: 538
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 92

Conread position: 69-193
Cow position:
Alignm length: 126
Alignm identity: 104
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 36, 72

Conread position: 78-419
Cow position:
Alignm length: 352
Alignm identity: 227
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 76, 62

Conread position: 79-530
Cow position:
Alignm length: 461
Alignm identity: 302
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 13, 30

Conread position: 79-572
Cow position:
Alignm length: 505
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 66

Conread position: 79-579
Cow position:
Alignm length: 510
Alignm identity: 329
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 74, 37

Conread position: 80-572
Cow position:
Alignm length: 497
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 29

Conread position: 80-572
Cow position:
Alignm length: 500
Alignm identity: 325
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 96, 28

Conread position: 80-577
Cow position:
Alignm length: 509
Alignm identity: 332
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 96, 29

Conread position: 80-579
Cow position:
Alignm length: 509
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 22

Conread position: 81-572
Cow position:
Alignm length: 500
Alignm identity: 325
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 95, 21

Conread position: 81-577
Cow position:
Alignm length: 505
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 28

Conread position: 84-572
Cow position:
Alignm length: 497
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 25

Conread position: 84-579
Cow position:
Alignm length: 511
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 61

Conread position: 85-572
Cow position:
Alignm length: 493
Alignm identity: 319
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 395, 15

Conread position: 85-572
Cow position:
Alignm length: 493
Alignm identity: 318
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 18, 59

Conread position: 85-577
Cow position:
Alignm length: 502
Alignm identity: 324
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 27, 59

Conread position: 90-428
Cow position:
Alignm length: 343
Alignm identity: 222
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 86, 22

Conread position: 91-572
Cow position:
Alignm length: 487
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 14

Conread position: 92-572
Cow position:
Alignm length: 490
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 17

Conread position: 106-396
Cow position:
Alignm length: 294
Alignm identity: 195
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 70, 37

Conread position: 112-579
Cow position:
Alignm length: 479
Alignm identity: 310
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 5, 33

Conread position: 114-572
Cow position:
Alignm length: 467
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 25

Conread position: 117-573
Cow position:
Alignm length: 459
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 26

Conread position: 121-327
Cow position:
Alignm length: 208
Alignm identity: 146
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 190, 22

Conread position: 121-559
Cow position:
Alignm length: 448
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 22

Conread position: 121-559
Cow position:
Alignm length: 449
Alignm identity: 300
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 55, 22

Conread position: 121-572
Cow position:
Alignm length: 460
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 23

Conread position: 121-572
Cow position:
Alignm length: 460
Alignm identity: 297
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 58, 22

Conread position: 121-572
Cow position:
Alignm length: 458
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 22

Conread position: 121-572
Cow position:
Alignm length: 457
Alignm identity: 296
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 55, 22

Conread position: 121-572
Cow position:
Alignm length: 460
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 22

Conread position: 121-572
Cow position:
Alignm length: 458
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 22

Conread position: 121-572
Cow position:
Alignm length: 460
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 22

Conread position: 121-572
Cow position:
Alignm length: 462
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 22

Conread position: 121-579
Cow position:
Alignm length: 464
Alignm identity: 298
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 174, 22

Conread position: 121-579
Cow position:
Alignm length: 467
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 22

Conread position: 121-579
Cow position:
Alignm length: 472
Alignm identity: 300
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 51, 26

Conread position: 121-579
Cow position:
Alignm length: 468
Alignm identity: 305
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 55, 22

Conread position: 121-579
Cow position:
Alignm length: 468
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 22

Conread position: 121-579
Cow position:
Alignm length: 468
Alignm identity: 302
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 132, 22

Conread position: 121-579
Cow position:
Alignm length: 468
Alignm identity: 303
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 132, 22

Conread position: 121-579
Cow position:
Alignm length: 468
Alignm identity: 306
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 55, 22

Conread position: 122-577
Cow position:
Alignm length: 460
Alignm identity: 285
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 161, 21

Conread position: 132-572
Cow position:
Alignm length: 451
Alignm identity: 287
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 7, 42

Conread position: 132-572
Cow position:
Alignm length: 449
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 11

Conread position: 132-572
Cow position:
Alignm length: 448
Alignm identity: 289
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 44, 18

Conread position: 140-572
Cow position:
Alignm length: 442
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 32

Conread position: 140-572
Cow position:
Alignm length: 442
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 32

Conread position: 140-579
Cow position:
Alignm length: 448
Alignm identity: 288
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 36, 32

Conread position: 161-572
Cow position:
Alignm length: 420
Alignm identity: 279
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 15, 11

Conread position: 162-443
Cow position:
Alignm length: 288
Alignm identity: 188
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 14, 10

Conread position: 162-571
Cow position:
Alignm length: 421
Alignm identity: 270
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 50, 17

Conread position: 163-577
Cow position:
Alignm length: 439
Alignm identity: 295
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 103, 44

Conread position: 189-579
Cow position:
Alignm length: 399
Alignm identity: 264
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 106, 111

Conread position: 207-572
Cow position:
Alignm length: 370
Alignm identity: 242
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 200, 98

Conread position: 208-579
Cow position:
Alignm length: 379
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 156

Conread position: 219-572
Cow position:
Alignm length: 360
Alignm identity: 243
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 92, 97

Conread position: 222-577
Cow position:
Alignm length: 361
Alignm identity: 240
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 138, 59

Conread position: 222-579
Cow position:
Alignm length: 366
Alignm identity: 238
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 73, 80

Conread position: 223-572
Cow position:
Alignm length: 357
Alignm identity: 232
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 138, 119

Conread position: 224-572
Cow position:
Alignm length: 359
Alignm identity: 225
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 87, 81

Conread position: 228-579
Cow position:
Alignm length: 359
Alignm identity: 227
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 132, 250

Conread position: 235-579
Cow position:
Alignm length: 355
Alignm identity: 232
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 20, 48

Conread position: 236-572
Cow position:
Alignm length: 347
Alignm identity: 234
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 12, 34

Conread position: 258-572
Cow position:
Alignm length: 322
Alignm identity: 211
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 102, 220

Conread position: 315-572
Cow position:
Alignm length: 262
Alignm identity: 175
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 45, 160

Conread position: 320-572
Cow position:
Alignm length: 257
Alignm identity: 173
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 41, 67

Conread position: 336-572
Cow position:
Alignm length: 243
Alignm identity: 167
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 63, 24

Conread position: 353-572
Cow position:
Alignm length: 222
Alignm identity: 155
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 55, 48

Conread position: 368-572
Cow position:
Alignm length: 207
Alignm identity: 143
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 51, 78

Conread position: 475-577
Cow position:
Alignm length: 103
Alignm identity: 84
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.