Cow genome map
| Conread name: | rpro36_m5.y1 |
| Conread position: | 1-354 |
| Cow position: | chr13:14409498-14409849 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 251 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 235, 16 |
| Conread position: | 194-354 |
| Cow position: | chr13:17439158-17439318 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 81, 50 |
| Conread position: | 283-574 |
| Cow position: | chr13:23960409-23960700 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 194, 79 |
| Conread position: | 377-553 |
| Cow position: | chr13:54095113-54094940 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 84, 14 |
| Conread position: | 388-569 |
| Cow position: | chr13:1780142-1779951 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 16, 69 |
| Conread position: | 390-572 |
| Cow position: | chr13:23166792-23166981 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 18, 14 |
| Conread position: | 392-572 |
| Cow position: | chr13:20820545-20820721 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 14, 18 |
| Conread position: | 392-572 |
| Cow position: | chr13:32167009-32167190 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 49, 25 |
| Conread position: | 409-572 |
| Cow position: | chr13:17270241-17270071 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 38, 5 |
| Conread position: | 414-569 |
| Cow position: | chr13:29671163-29671321 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 417-572 |
| Cow position: | chr13:54969551-54969705 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 60, 32 |
| Conread position: | 421-558 |
| Cow position: | chr13:14227196-14227056 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 57, 7 |
| Conread position: | 435-569 |
| Cow position: | chr13:24539751-24539610 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 436-569 |
| Cow position: | chr13:41360004-41359867 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 440-560 |
| Cow position: | chr13:1767018-1766895 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 102 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 40, 22 |
| Conread position: | 440-572 |
| Cow position: | chr13:55843735-55843598 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 440-574 |
| Cow position: | chr13:16952925-16952788 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 39, 108 |
| Conread position: | 444-574 |
| Cow position: | chr13:16041281-16041149 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 456-572 |
| Cow position: | chr13:11290585-11290706 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 470-569 |
| Cow position: | chr13:35653875-35653974 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 83 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.