Cow genome map
| Conread name: | rpro36_m5.y1 |
| Conread position: | 1-348 |
| Cow position: | chr2:32417492-32417145 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 169 |
| Conread position: | 1-349 |
| Cow position: | chr2:57557550-57557205 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 274, 166 |
| Conread position: | 1-550 |
| Cow position: | chr2:36878905-36878369 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 275, 150 |
| Conread position: | 1-553 |
| Cow position: | chr2:40540670-40541239 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 366 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 229, 20 |
| Conread position: | 1-572 |
| Cow position: | chr2:40312660-40313245 (view UCSC Genome Browser custom track) |
| Alignm length: | 590 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 232, 176 |
| Conread position: | 48-553 |
| Cow position: | chr2:48360918-48361419 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 227, 119 |
| Conread position: | 123-354 |
| Cow position: | chr2:52409771-52409541 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 152, 55 |
| Conread position: | 173-560 |
| Cow position: | chr2:3544811-3544433 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 260 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 89, 72 |
| Conread position: | 194-353 |
| Cow position: | chr2:61485207-61485366 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 81, 50 |
| Conread position: | 281-550 |
| Cow position: | chr2:42927867-42927602 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 188 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 123, 75 |
| Conread position: | 390-572 |
| Cow position: | chr2:45311438-45311252 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 88, 14 |
| Conread position: | 395-550 |
| Cow position: | chr2:24434591-24434441 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 24, 9 |
| Conread position: | 395-568 |
| Cow position: | chr2:65050728-65050900 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 88, 19 |
| Conread position: | 396-569 |
| Cow position: | chr2:6063333-6063149 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 23, 6 |
| Conread position: | 405-553 |
| Cow position: | chr2:2688875-2689024 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 71, 14 |
| Conread position: | 414-572 |
| Cow position: | chr2:26102488-26102651 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 414-572 |
| Cow position: | chr2:30816664-30816830 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 5, 93 |
| Conread position: | 418-572 |
| Cow position: | chr2:73069429-73069593 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 419-569 |
| Cow position: | chr2:39831934-39832093 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 420-568 |
| Cow position: | chr2:14099362-14099514 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 57, 72 |
| Conread position: | 422-572 |
| Cow position: | chr2:36977626-36977783 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 62, 93 |
| Conread position: | 424-572 |
| Cow position: | chr2:74209605-74209456 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 15, 133 |
| Conread position: | 426-572 |
| Cow position: | chr2:53000232-53000382 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 120 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 50, 6 |
| Conread position: | 426-574 |
| Cow position: | chr2:76822532-76822377 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 427-572 |
| Cow position: | chr2:31264764-31264615 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 432-569 |
| Cow position: | chr2:62818989-62818845 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 112 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 435-569 |
| Cow position: | chr2:40428073-40427932 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 435-572 |
| Cow position: | chr2:7193932-7194073 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 436-572 |
| Cow position: | chr2:53717250-53717111 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 438-572 |
| Cow position: | chr2:50580102-50580243 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 439-572 |
| Cow position: | chr2:51644756-51644894 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 107 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 440-572 |
| Cow position: | chr2:27613291-27613151 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 440-572 |
| Cow position: | chr2:69250941-69250806 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 440-574 |
| Cow position: | chr2:27145629-27145491 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 441-552 |
| Cow position: | chr2:42800783-42800892 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 92 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 441-572 |
| Cow position: | chr2:43773839-43773706 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 105 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 35, 93 |
| Conread position: | 441-572 |
| Cow position: | chr2:46227204-46227337 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 106 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 35, 13 |
| Conread position: | 441-572 |
| Cow position: | chr2:57776085-57776220 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 105 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 442-571 |
| Cow position: | chr2:44065329-44065460 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 104 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 34, 100 |
| Conread position: | 445-572 |
| Cow position: | chr2:69046780-69046908 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 446-574 |
| Cow position: | chr2:45784477-45784604 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 447-572 |
| Cow position: | chr2:6720598-6720731 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 447-574 |
| Cow position: | chr2:40492111-40492244 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 107 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 30, 0 |
Show alignments to all cow chromosomes.