Cow genome map
| Conread name: | rpro36_m5.y1 |
| Conread position: | 1-354 |
| Cow position: | chr8:33993559-33993909 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 274, 177 |
| Conread position: | 1-546 |
| Cow position: | chr8:54302369-54302890 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 275, 111 |
| Conread position: | 123-572 |
| Cow position: | chr8:36504781-36505249 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 56 |
| Conread position: | 191-349 |
| Cow position: | chr8:15800370-15800211 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 60, 46 |
| Conread position: | 191-354 |
| Cow position: | chr8:5166372-5166205 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 213-553 |
| Cow position: | chr8:58619337-58619011 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 234 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 62, 31 |
| Conread position: | 386-572 |
| Cow position: | chr8:57943657-57943466 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 22, 34 |
| Conread position: | 387-573 |
| Cow position: | chr8:52195609-52195801 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 15, 70 |
| Conread position: | 391-572 |
| Cow position: | chr8:20892058-20892234 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 28, 18 |
| Conread position: | 396-560 |
| Cow position: | chr8:24909324-24909482 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 9, 13 |
| Conread position: | 409-569 |
| Cow position: | chr8:17103704-17103542 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 32, 18 |
| Conread position: | 414-544 |
| Cow position: | chr8:35583842-35583707 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 416-572 |
| Cow position: | chr8:23160674-23160836 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 417-568 |
| Cow position: | chr8:27368822-27368977 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 33, 19 |
| Conread position: | 417-572 |
| Cow position: | chr8:37122693-37122855 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 58, 114 |
| Conread position: | 418-569 |
| Cow position: | chr8:54448599-54448443 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 61, 10 |
| Conread position: | 418-572 |
| Cow position: | chr8:60320244-60320404 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 422-568 |
| Cow position: | chr8:37008183-37008037 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 39, 95 |
| Conread position: | 425-572 |
| Cow position: | chr8:51905315-51905162 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 430-572 |
| Cow position: | chr8:58385406-58385548 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 46, 20 |
| Conread position: | 432-564 |
| Cow position: | chr8:4940572-4940437 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 432-567 |
| Cow position: | chr8:6021896-6021760 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 40, 8 |
| Conread position: | 432-569 |
| Cow position: | chr8:42889396-42889257 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 45, 68 |
| Conread position: | 433-572 |
| Cow position: | chr8:44450146-44450004 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 436-568 |
| Cow position: | chr8:18220984-18220848 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 41, 5 |
| Conread position: | 436-572 |
| Cow position: | chr8:41264055-41264187 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 438-564 |
| Cow position: | chr8:25579284-25579410 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 38, 60 |
| Conread position: | 438-572 |
| Cow position: | chr8:33814685-33814824 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 438-572 |
| Cow position: | chr8:35436871-35436734 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 438-572 |
| Cow position: | chr8:42139299-42139165 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 45, 105 |
| Conread position: | 440-572 |
| Cow position: | chr8:4161282-4161146 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 440-572 |
| Cow position: | chr8:18395479-18395607 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 440-572 |
| Cow position: | chr8:26922382-26922519 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 441-572 |
| Cow position: | chr8:3433621-3433760 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 441-572 |
| Cow position: | chr8:54572392-54572524 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 442-550 |
| Cow position: | chr8:11637870-11637978 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 447-572 |
| Cow position: | chr8:32491310-32491436 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 448-572 |
| Cow position: | chr8:44703843-44703972 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 28, 0 |
Show alignments to all cow chromosomes.