Cow genome map
| Conread name: | rpro36_m5.y1 |
| Conread position: | 12-354 |
| Cow position: | chr9:34015914-34016259 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 147 |
| Conread position: | 56-354 |
| Cow position: | chr9:8778604-8778906 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 211 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 177, 111 |
| Conread position: | 65-350 |
| Cow position: | chr9:38032548-38032834 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 216 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 168, 40 |
| Conread position: | 91-572 |
| Cow position: | chr9:12184382-12183908 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 88 |
| Conread position: | 151-574 |
| Cow position: | chr9:24619780-24619370 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 278 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 124, 28 |
| Conread position: | 176-354 |
| Cow position: | chr9:22456542-22456364 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 99, 61 |
| Conread position: | 176-566 |
| Cow position: | chr9:1751885-1751499 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 260 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 180, 68 |
| Conread position: | 314-569 |
| Cow position: | chr9:35533530-35533788 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 90, 48 |
| Conread position: | 396-564 |
| Cow position: | chr9:5327588-5327421 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 14, 20 |
| Conread position: | 402-572 |
| Cow position: | chr9:8914596-8914421 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 19, 30 |
| Conread position: | 414-572 |
| Cow position: | chr9:32306119-32306280 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 416-569 |
| Cow position: | chr9:35850219-35850061 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 417-572 |
| Cow position: | chr9:55262266-55262420 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 419-569 |
| Cow position: | chr9:14961265-14961109 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 429-572 |
| Cow position: | chr9:32306933-32307078 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 431-569 |
| Cow position: | chr9:58133720-58133864 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 432-572 |
| Cow position: | chr9:15215378-15215523 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 432-572 |
| Cow position: | chr9:52787233-52787378 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 436-569 |
| Cow position: | chr9:59924840-59924705 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 6, 11 |
| Conread position: | 437-573 |
| Cow position: | chr9:3724764-3724903 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 439-572 |
| Cow position: | chr9:3594229-3594371 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 440-569 |
| Cow position: | chr9:33100847-33100979 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 440-572 |
| Cow position: | chr9:10127375-10127513 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 440-574 |
| Cow position: | chr9:22361309-22361168 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 40, 82 |
| Conread position: | 441-550 |
| Cow position: | chr9:38385575-38385689 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 441-564 |
| Cow position: | chr9:11146361-11146492 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 441-567 |
| Cow position: | chr9:11155799-11155670 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 441-572 |
| Cow position: | chr9:5340926-5340792 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 443-572 |
| Cow position: | chr9:35101159-35101026 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 445-572 |
| Cow position: | chr9:36586529-36586660 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 446-572 |
| Cow position: | chr9:5400004-5399878 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 447-569 |
| Cow position: | chr9:51311958-51311831 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 450-572 |
| Cow position: | chr9:12356141-12356015 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 451-569 |
| Cow position: | chr9:5029799-5029677 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 97 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 464-572 |
| Cow position: | chr9:19266894-19267005 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 92 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 469-572 |
| Cow position: | chr9:24399423-24399527 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 88 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 470-569 |
| Cow position: | chr9:20839875-20839777 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 85 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 92, 0 |
Show alignments to all cow chromosomes.