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Cow genome map

           
Conread name:
           
rpro40_a11.y1
        

               
Conread position:
               
12-379
               

               
Cow position:
               
chr18:3085286-3085654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 12
               

               
Conread position:
               
12-555
               

               
Cow position:
               
chr18:10576325-10575791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 13
               

               
Conread position:
               
16-151
               

               
Cow position:
               
chr18:52395416-52395553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
48, 8
               

               
Conread position:
               
24-429
               

               
Cow position:
               
chr18:46276093-46276498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
125, 18
               

               
Conread position:
               
31-538
               

               
Cow position:
               
chr18:3180609-3180118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
320, 45
               

               
Conread position:
               
32-312
               

               
Cow position:
               
chr18:4626592-4626859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
43-268
               

               
Cow position:
               
chr18:28322841-28322627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
10, 34
               

               
Conread position:
               
44-505
               

               
Cow position:
               
chr18:12059181-12058753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
45-228
               

               
Cow position:
               
chr18:4485782-4485606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
45-538
               

               
Cow position:
               
chr18:51757277-51756797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
305, 17
               

               
Conread position:
               
46-540
               

               
Cow position:
               
chr18:44262810-44262322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 97
               

               
Conread position:
               
46-555
               

               
Cow position:
               
chr18:31672332-31672824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
19, 100
               

               
Conread position:
               
47-528
               

               
Cow position:
               
chr18:46452699-46453170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 85
               

               
Conread position:
               
47-555
               

               
Cow position:
               
chr18:18339777-18340274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 64
               

               
Conread position:
               
47-555
               

               
Cow position:
               
chr18:55505586-55505083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
302, 29
               

               
Conread position:
               
48-541
               

               
Cow position:
               
chr18:7650158-7649690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 56
               

               
Conread position:
               
49-330
               

               
Cow position:
               
chr18:51383218-51383488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
264, 19
               

               
Conread position:
               
49-555
               

               
Cow position:
               
chr18:9010888-9010411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 98
               

               
Conread position:
               
50-242
               

               
Cow position:
               
chr18:34444558-34444744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
181, 12
               

               
Conread position:
               
50-285
               

               
Cow position:
               
chr18:4152375-4152601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
79, 11
               

               
Conread position:
               
50-302
               

               
Cow position:
               
chr18:47486228-47485980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
29, 114
               

               
Conread position:
               
50-309
               

               
Cow position:
               
chr18:50359507-50359262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
15, 87
               

               
Conread position:
               
50-389
               

               
Cow position:
               
chr18:7963597-7963295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
50-530
               

               
Cow position:
               
chr18:15613682-15614137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 5
               

               
Conread position:
               
51-279
               

               
Cow position:
               
chr18:11672235-11672002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
21, 121
               

               
Conread position:
               
51-286
               

               
Cow position:
               
chr18:50632267-50632490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
51-302
               

               
Cow position:
               
chr18:10051926-10051685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
51-305
               

               
Cow position:
               
chr18:6470273-6470028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
15, 87
               

               
Conread position:
               
51-378
               

               
Cow position:
               
chr18:51643190-51643504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
51-380
               

               
Cow position:
               
chr18:10214006-10214336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
5, 105
               

               
Conread position:
               
51-389
               

               
Cow position:
               
chr18:1571059-1571386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 95
               

               
Conread position:
               
51-491
               

               
Cow position:
               
chr18:4495710-4496139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
303, 59
               

               
Conread position:
               
52-165
               

               
Cow position:
               
chr18:20391384-20391272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
52-217
               

               
Cow position:
               
chr18:4907323-4907165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
52-231
               

               
Cow position:
               
chr18:16137098-16137277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
8, 44
               

               
Conread position:
               
52-232
               

               
Cow position:
               
chr18:50276066-50276240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
52-240
               

               
Cow position:
               
chr18:21187480-21187301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
19, 95
               

               
Conread position:
               
52-245
               

               
Cow position:
               
chr18:1549363-1549559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
103, 10
               

               
Conread position:
               
52-249
               

               
Cow position:
               
chr18:21528828-21528633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
131, 24
               

               
Conread position:
               
52-255
               

               
Cow position:
               
chr18:39460395-39460200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
52-265
               

               
Cow position:
               
chr18:11857074-11856874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
52-266
               

               
Cow position:
               
chr18:49602863-49603071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
52-273
               

               
Cow position:
               
chr18:45573559-45573340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
82, 16
               

               
Conread position:
               
52-295
               

               
Cow position:
               
chr18:11233600-11233359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
56, 117
               

               
Conread position:
               
52-303
               

               
Cow position:
               
chr18:27079045-27078803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
52-303
               

               
Cow position:
               
chr18:31556980-31557226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
121, 16
               

               
Conread position:
               
52-304
               

               
Cow position:
               
chr18:27388773-27388518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
24, 10
               

               
Conread position:
               
52-305
               

               
Cow position:
               
chr18:15809632-15809863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
193, 85
               

               
Conread position:
               
52-306
               

               
Cow position:
               
chr18:18844192-18843945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
15, 91
               

               
Conread position:
               
52-312
               

               
Cow position:
               
chr18:41950391-41950133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
89, 18
               

               
Conread position:
               
52-337
               

               
Cow position:
               
chr18:8949621-8949890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
52-337
               

               
Cow position:
               
chr18:9040524-9040807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
21, 95
               

               
Conread position:
               
52-337
               

               
Cow position:
               
chr18:22180602-22180881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
192, 88
               

               
Conread position:
               
52-359
               

               
Cow position:
               
chr18:23163075-23162773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
11, 70
               

               
Conread position:
               
52-369
               

               
Cow position:
               
chr18:23630436-23630734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
251, 80
               

               
Conread position:
               
52-380
               

               
Cow position:
               
chr18:4264216-4264531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
19, 74
               

               
Conread position:
               
52-381
               

               
Cow position:
               
chr18:54130161-54130475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
15, 60
               

               
Conread position:
               
52-419
               

               
Cow position:
               
chr18:43555334-43555704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
78, 116
               

               
Conread position:
               
52-443
               

               
Cow position:
               
chr18:18369173-18369566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
95, 24
               

               
Conread position:
               
52-479
               

               
Cow position:
               
chr18:247517-247923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
14, 81
               

               
Conread position:
               
52-479
               

               
Cow position:
               
chr18:18592643-18592233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
298, 74
               

               
Conread position:
               
52-488
               

               
Cow position:
               
chr18:32883469-32883053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
298, 10
               

               
Conread position:
               
52-503
               

               
Cow position:
               
chr18:42431433-42431871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 59
               

               
Conread position:
               
52-507
               

               
Cow position:
               
chr18:22055684-22056122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
32, 15
               

               
Conread position:
               
52-516
               

               
Cow position:
               
chr18:4668330-4668773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
347, 15
               

               
Conread position:
               
52-520
               

               
Cow position:
               
chr18:2591982-2592456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 20
               

               
Conread position:
               
52-524
               

               
Cow position:
               
chr18:20641322-20641772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
298, 80
               

               
Conread position:
               
52-527
               

               
Cow position:
               
chr18:42479400-42479870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 100
               

               
Conread position:
               
52-533
               

               
Cow position:
               
chr18:9558145-9557685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
297, 60
               

               
Conread position:
               
52-550
               

               
Cow position:
               
chr18:20126473-20125990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 91
               

               
Conread position:
               
52-553
               

               
Cow position:
               
chr18:6881178-6881657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 43
               

               
Conread position:
               
52-554
               

               
Cow position:
               
chr18:7965411-7964911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 129
               

               
Conread position:
               
52-555
               

               
Cow position:
               
chr18:4884341-4884836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 18
               

               
Conread position:
               
52-555
               

               
Cow position:
               
chr18:9089870-9089384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 58
               

               
Conread position:
               
52-555
               

               
Cow position:
               
chr18:12117674-12118166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 97
               

               
Conread position:
               
52-555
               

               
Cow position:
               
chr18:29957996-29958467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 33
               

               
Conread position:
               
52-555
               

               
Cow position:
               
chr18:51691282-51691789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 89
               

               
Conread position:
               
53-239
               

               
Cow position:
               
chr18:49040424-49040620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
53-254
               

               
Cow position:
               
chr18:7945374-7945179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
159, 15
               

               
Conread position:
               
53-295
               

               
Cow position:
               
chr18:39811406-39811639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
36, 23
               

               
Conread position:
               
53-305
               

               
Cow position:
               
chr18:52414143-52413898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
86, 9
               

               
Conread position:
               
53-309
               

               
Cow position:
               
chr18:24343040-24342771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
65, 10
               

               
Conread position:
               
53-529
               

               
Cow position:
               
chr18:50382430-50381965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 114
               

               
Conread position:
               
53-536
               

               
Cow position:
               
chr18:29065215-29065671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
389, 10
               

               
Conread position:
               
53-555
               

               
Cow position:
               
chr18:9974153-9974646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
297, 10
               

               
Conread position:
               
53-555
               

               
Cow position:
               
chr18:45104253-45104767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 21
               

               
Conread position:
               
53-555
               

               
Cow position:
               
chr18:45903716-45904213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 109
               

               
Conread position:
               
53-555
               

               
Cow position:
               
chr18:55782256-55782747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
299, 32
               

               
Conread position:
               
54-207
               

               
Cow position:
               
chr18:50786789-50786935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
54-256
               

               
Cow position:
               
chr18:12143774-12143971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
184, 78
               

               
Conread position:
               
54-273
               

               
Cow position:
               
chr18:41724634-41724853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
17, 45
               

               
Conread position:
               
54-389
               

               
Cow position:
               
chr18:34219729-34220070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
56, 201
               

               
Conread position:
               
54-536
               

               
Cow position:
               
chr18:54572111-54572595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 105
               

               
Conread position:
               
55-180
               

               
Cow position:
               
chr18:21410863-21410740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
17, 97
               

               
Conread position:
               
55-237
               

               
Cow position:
               
chr18:14871429-14871606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
55-243
               

               
Cow position:
               
chr18:14172037-14172219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
55-243
               

               
Cow position:
               
chr18:22045235-22045421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
86, 105
               

               
Conread position:
               
55-245
               

               
Cow position:
               
chr18:45897903-45897723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
55-274
               

               
Cow position:
               
chr18:47801920-47802126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
55-295
               

               
Cow position:
               
chr18:2773210-2773449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
12, 110
               

               
Conread position:
               
55-295
               

               
Cow position:
               
chr18:2776713-2776952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
12, 198
               

               
Conread position:
               
55-309
               

               
Cow position:
               
chr18:52251678-52251926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
204, 108
               

               
Conread position:
               
55-317
               

               
Cow position:
               
chr18:38601708-38601962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
26, 78
               

               
Conread position:
               
55-320
               

               
Cow position:
               
chr18:14225563-14225308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
230, 15
               

               
Conread position:
               
55-337
               

               
Cow position:
               
chr18:25598054-25598338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
16, 99
               

               
Conread position:
               
55-344
               

               
Cow position:
               
chr18:43796782-43797057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 72
               

               
Conread position:
               
55-359
               

               
Cow position:
               
chr18:50959664-50959366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
199, 21
               

               
Conread position:
               
55-372
               

               
Cow position:
               
chr18:31711399-31711698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
12, 67
               

               
Conread position:
               
55-401
               

               
Cow position:
               
chr18:5632440-5632104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
278, 21
               

               
Conread position:
               
55-473
               

               
Cow position:
               
chr18:33896239-33896656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 15
               

               
Conread position:
               
55-497
               

               
Cow position:
               
chr18:11791091-11790682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
248, 12
               

               
Conread position:
               
55-520
               

               
Cow position:
               
chr18:41024941-41025433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 280
               

               
Conread position:
               
55-528
               

               
Cow position:
               
chr18:3027166-3027656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 106
               

               
Conread position:
               
55-529
               

               
Cow position:
               
chr18:11779826-11779374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
366, 25
               

               
Conread position:
               
55-534
               

               
Cow position:
               
chr18:10905023-10904549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
256, 96
               

               
Conread position:
               
55-536
               

               
Cow position:
               
chr18:37023361-37023855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 118
               

               
Conread position:
               
55-539
               

               
Cow position:
               
chr18:39875067-39875562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 158
               

               
Conread position:
               
55-553
               

               
Cow position:
               
chr18:11867517-11867034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 103
               

               
Conread position:
               
55-553
               

               
Cow position:
               
chr18:40759397-40758897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 195
               

               
Conread position:
               
55-555
               

               
Cow position:
               
chr18:22789914-22790391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
247, 85
               

               
Conread position:
               
55-555
               

               
Cow position:
               
chr18:28101805-28101305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
253, 37
               

               
Conread position:
               
55-555
               

               
Cow position:
               
chr18:55120043-55119553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 42
               

               
Conread position:
               
56-185
               

               
Cow position:
               
chr18:25205820-25205954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
56-240
               

               
Cow position:
               
chr18:9596352-9596178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
56-240
               

               
Cow position:
               
chr18:47175204-47175386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
59, 14
               

               
Conread position:
               
56-241
               

               
Cow position:
               
chr18:32290876-32290706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
56-258
               

               
Cow position:
               
chr18:45186050-45185849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
33, 20
               

               
Conread position:
               
56-268
               

               
Cow position:
               
chr18:21751557-21751343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
9, 105
               

               
Conread position:
               
56-269
               

               
Cow position:
               
chr18:18664190-18664404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
76, 132
               

               
Conread position:
               
56-272
               

               
Cow position:
               
chr18:35786228-35786022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
56-316
               

               
Cow position:
               
chr18:47417176-47416926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
14, 22
               

               
Conread position:
               
56-322
               

               
Cow position:
               
chr18:5600813-5600551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
241, 22
               

               
Conread position:
               
56-337
               

               
Cow position:
               
chr18:23169755-23169479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
56-337
               

               
Cow position:
               
chr18:28930466-28930736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
255, 76
               

               
Conread position:
               
56-364
               

               
Cow position:
               
chr18:15516997-15517301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
17, 97
               

               
Conread position:
               
56-378
               

               
Cow position:
               
chr18:23623455-23623771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
93, 107
               

               
Conread position:
               
56-381
               

               
Cow position:
               
chr18:20462532-20462835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
203, 92
               

               
Conread position:
               
56-448
               

               
Cow position:
               
chr18:3212054-3211665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
261, 20
               

               
Conread position:
               
56-492
               

               
Cow position:
               
chr18:17649564-17649988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
241, 125
               

               
Conread position:
               
56-534
               

               
Cow position:
               
chr18:43951002-43950548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
144, 20
               

               
Conread position:
               
56-539
               

               
Cow position:
               
chr18:16227735-16227259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
110, 20
               

               
Conread position:
               
57-245
               

               
Cow position:
               
chr18:20057342-20057165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
128, 39
               

               
Conread position:
               
57-246
               

               
Cow position:
               
chr18:56463554-56463741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
57-251
               

               
Cow position:
               
chr18:27637666-27637476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
57-252
               

               
Cow position:
               
chr18:41553191-41553389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
103, 187
               

               
Conread position:
               
57-255
               

               
Cow position:
               
chr18:8208250-8208445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
57-257
               

               
Cow position:
               
chr18:22905781-22905980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
57-258
               

               
Cow position:
               
chr18:44205920-44206109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
181, 40
               

               
Conread position:
               
57-312
               

               
Cow position:
               
chr18:46880533-46880779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
57-336
               

               
Cow position:
               
chr18:6005327-6005598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
92, 45
               

               
Conread position:
               
57-357
               

               
Cow position:
               
chr18:12584670-12584961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
229, 58
               

               
Conread position:
               
57-395
               

               
Cow position:
               
chr18:19688202-19687863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
94, 125
               

               
Conread position:
               
57-448
               

               
Cow position:
               
chr18:1954408-1954797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 11
               

               
Conread position:
               
57-538
               

               
Cow position:
               
chr18:55692992-55692521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 68
               

               
Conread position:
               
57-548
               

               
Cow position:
               
chr18:19143330-19143827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 187
               

               
Conread position:
               
57-554
               

               
Cow position:
               
chr18:7951289-7950793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
79, 27
               

               
Conread position:
               
57-555
               

               
Cow position:
               
chr18:51827453-51826970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
324, 124
               

               
Conread position:
               
58-219
               

               
Cow position:
               
chr18:41257744-41257904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
149, 0
               

               
Conread position:
               
58-232
               

               
Cow position:
               
chr18:50004533-50004702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
58-235
               

               
Cow position:
               
chr18:47096595-47096429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
58-271
               

               
Cow position:
               
chr18:43057066-43056866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
90, 104
               

               
Conread position:
               
58-286
               

               
Cow position:
               
chr18:2793803-2794019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
58-294
               

               
Cow position:
               
chr18:16379116-16378867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
74, 209
               

               
Conread position:
               
58-296
               

               
Cow position:
               
chr18:44917927-44917699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
71, 58
               

               
Conread position:
               
58-300
               

               
Cow position:
               
chr18:24719482-24719251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
22, 74
               

               
Conread position:
               
58-309
               

               
Cow position:
               
chr18:37189118-37189366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
16, 104
               

               
Conread position:
               
58-311
               

               
Cow position:
               
chr18:56155689-56155449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
114, 105
               

               
Conread position:
               
58-336
               

               
Cow position:
               
chr18:17974796-17974547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
253, 14
               

               
Conread position:
               
58-337
               

               
Cow position:
               
chr18:35534978-35535247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
262, 12
               

               
Conread position:
               
58-365
               

               
Cow position:
               
chr18:2146420-2146712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
196, 12
               

               
Conread position:
               
58-445
               

               
Cow position:
               
chr18:7109305-7108920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
20, 106
               

               
Conread position:
               
58-465
               

               
Cow position:
               
chr18:39623977-39623571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 106
               

               
Conread position:
               
58-473
               

               
Cow position:
               
chr18:10977042-10977444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
383, 38
               

               
Conread position:
               
59-245
               

               
Cow position:
               
chr18:4000523-4000337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
12, 106
               

               
Conread position:
               
59-255
               

               
Cow position:
               
chr18:34490452-34490260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
162, 17
               

               
Conread position:
               
59-266
               

               
Cow position:
               
chr18:49970480-49970683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
92, 17
               

               
Conread position:
               
59-284
               

               
Cow position:
               
chr18:45558314-45558101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
59-295
               

               
Cow position:
               
chr18:51192573-51192797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
13, 40
               

               
Conread position:
               
59-301
               

               
Cow position:
               
chr18:38211330-38211096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
120, 17
               

               
Conread position:
               
59-309
               

               
Cow position:
               
chr18:44909224-44908982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
59-381
               

               
Cow position:
               
chr18:51594645-51594943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
291, 77
               

               
Conread position:
               
59-410
               

               
Cow position:
               
chr18:8170919-8171255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
291, 81
               

               
Conread position:
               
59-515
               

               
Cow position:
               
chr18:55759296-55759759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
66, 11
               

               
Conread position:
               
59-538
               

               
Cow position:
               
chr18:16043978-16044455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
118, 43
               

               
Conread position:
               
59-540
               

               
Cow position:
               
chr18:33159115-33158651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
291, 91
               

               
Conread position:
               
59-553
               

               
Cow position:
               
chr18:29372041-29371548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
335, 20
               

               
Conread position:
               
59-555
               

               
Cow position:
               
chr18:5189521-5190000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
186, 9
               

               
Conread position:
               
59-555
               

               
Cow position:
               
chr18:14586308-14586797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 11
               

               
Conread position:
               
59-555
               

               
Cow position:
               
chr18:26939144-26938664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
246, 38
               

               
Conread position:
               
60-238
               

               
Cow position:
               
chr18:56183328-56183509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
11, 111
               

               
Conread position:
               
61-204
               

               
Cow position:
               
chr18:18520630-18520770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
5, 92
               

               
Conread position:
               
61-239
               

               
Cow position:
               
chr18:47419962-47419795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
61-245
               

               
Cow position:
               
chr18:2108418-2108238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
88, 63
               

               
Conread position:
               
61-271
               

               
Cow position:
               
chr18:41703003-41702804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
61-308
               

               
Cow position:
               
chr18:53053060-53053305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
71, 15
               

               
Conread position:
               
61-315
               

               
Cow position:
               
chr18:16659258-16659509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
88, 103
               

               
Conread position:
               
61-336
               

               
Cow position:
               
chr18:32189348-32189607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
241, 11
               

               
Conread position:
               
61-380
               

               
Cow position:
               
chr18:49038623-49038321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
289, 15
               

               
Conread position:
               
61-388
               

               
Cow position:
               
chr18:55747858-55747538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
118, 102
               

               
Conread position:
               
61-478
               

               
Cow position:
               
chr18:23652943-23653360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
23, 63
               

               
Conread position:
               
61-540
               

               
Cow position:
               
chr18:32873765-32873279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
25, 15
               

               
Conread position:
               
61-555
               

               
Cow position:
               
chr18:56181287-56181776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 82
               

               
Conread position:
               
62-340
               

               
Cow position:
               
chr18:42953909-42954166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
192, 36
               

               
Conread position:
               
62-379
               

               
Cow position:
               
chr18:4555995-4556305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
74, 103
               

               
Conread position:
               
62-533
               

               
Cow position:
               
chr18:18918794-18919249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
288, 83
               

               
Conread position:
               
62-555
               

               
Cow position:
               
chr18:12270681-12270171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 180
               

               
Conread position:
               
63-194
               

               
Cow position:
               
chr18:17837966-17838095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
63-239
               

               
Cow position:
               
chr18:49441010-49440837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
63-255
               

               
Cow position:
               
chr18:19961968-19962163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
68, 105
               

               
Conread position:
               
63-257
               

               
Cow position:
               
chr18:4489733-4489930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
63-271
               

               
Cow position:
               
chr18:48407900-48407706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
63-300
               

               
Cow position:
               
chr18:47824606-47824830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
63-305
               

               
Cow position:
               
chr18:38937988-38937755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
191, 94
               

               
Conread position:
               
63-307
               

               
Cow position:
               
chr18:31082175-31082417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 180
               

               
Conread position:
               
63-309
               

               
Cow position:
               
chr18:19765354-19765119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
63-331
               

               
Cow position:
               
chr18:32251997-32252260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
103, 42
               

               
Conread position:
               
63-380
               

               
Cow position:
               
chr18:42751420-42751752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 152
               

               
Conread position:
               
63-380
               

               
Cow position:
               
chr18:48242350-48242049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
133, 40
               

               
Conread position:
               
63-388
               

               
Cow position:
               
chr18:37303322-37302995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
131, 68
               

               
Conread position:
               
63-389
               

               
Cow position:
               
chr18:50095241-50095543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
63-426
               

               
Cow position:
               
chr18:42290166-42290508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
63-426
               

               
Cow position:
               
chr18:42292894-42293236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
63-435
               

               
Cow position:
               
chr18:5072249-5072606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
238, 69
               

               
Conread position:
               
63-466
               

               
Cow position:
               
chr18:1399184-1399577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
287, 88
               

               
Conread position:
               
63-511
               

               
Cow position:
               
chr18:32410847-32411262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
83, 103
               

               
Conread position:
               
63-518
               

               
Cow position:
               
chr18:11691238-11691691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
241, 88
               

               
Conread position:
               
63-526
               

               
Cow position:
               
chr18:10891679-10891238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
327, 44
               

               
Conread position:
               
63-527
               

               
Cow position:
               
chr18:38985859-38985397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 82
               

               
Conread position:
               
63-536
               

               
Cow position:
               
chr18:9066868-9066419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
188, 69
               

               
Conread position:
               
63-536
               

               
Cow position:
               
chr18:30341014-30341462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
287, 72
               

               
Conread position:
               
63-536
               

               
Cow position:
               
chr18:46048922-46048466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 97
               

               
Conread position:
               
63-537
               

               
Cow position:
               
chr18:6310248-6309780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 88
               

               
Conread position:
               
63-537
               

               
Cow position:
               
chr18:39662949-39662485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 102
               

               
Conread position:
               
63-538
               

               
Cow position:
               
chr18:3417334-3416871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 148
               

               
Conread position:
               
63-553
               

               
Cow position:
               
chr18:7952378-7951885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 191
               

               
Conread position:
               
63-554
               

               
Cow position:
               
chr18:28657751-28658232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
287, 27
               

               
Conread position:
               
63-555
               

               
Cow position:
               
chr18:9366090-9365591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
239, 88
               

               
Conread position:
               
63-555
               

               
Cow position:
               
chr18:10954632-10954158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
287, 78
               

               
Conread position:
               
63-555
               

               
Cow position:
               
chr18:30359974-30360441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 191
               

               
Conread position:
               
64-204
               

               
Cow position:
               
chr18:30247838-30247973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
64-242
               

               
Cow position:
               
chr18:55722667-55722495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
64-255
               

               
Cow position:
               
chr18:6828954-6829152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
129, 87
               

               
Conread position:
               
64-461
               

               
Cow position:
               
chr18:16545295-16545689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
130, 119
               

               
Conread position:
               
64-527
               

               
Cow position:
               
chr18:12242444-12242000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
233, 51
               

               
Conread position:
               
64-552
               

               
Cow position:
               
chr18:3132606-3133060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
384, 83
               

               
Conread position:
               
64-555
               

               
Cow position:
               
chr18:43283589-43284072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 55
               

               
Conread position:
               
64-555
               

               
Cow position:
               
chr18:47512162-47511673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 34
               

               
Conread position:
               
65-266
               

               
Cow position:
               
chr18:31159106-31159303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
65-342
               

               
Cow position:
               
chr18:22568902-22569169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
73, 47
               

               
Conread position:
               
65-364
               

               
Cow position:
               
chr18:52402799-52403096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
70, 32
               

               
Conread position:
               
65-482
               

               
Cow position:
               
chr18:17390824-17391216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 67
               

               
Conread position:
               
65-497
               

               
Cow position:
               
chr18:12023473-12023890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
280, 81
               

               
Conread position:
               
65-519
               

               
Cow position:
               
chr18:56184112-56183656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 24
               

               
Conread position:
               
65-555
               

               
Cow position:
               
chr18:29648946-29648468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 80
               

               
Conread position:
               
66-295
               

               
Cow position:
               
chr18:52649174-52649404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
100, 190
               

               
Conread position:
               
66-307
               

               
Cow position:
               
chr18:47547817-47548055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
66, 30
               

               
Conread position:
               
66-311
               

               
Cow position:
               
chr18:5647973-5647739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
231, 64
               

               
Conread position:
               
68-246
               

               
Cow position:
               
chr18:35857761-35857934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
68-256
               

               
Cow position:
               
chr18:42978469-42978666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
73, 193
               

               
Conread position:
               
68-268
               

               
Cow position:
               
chr18:3097862-3098062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
71, 99
               

               
Conread position:
               
68-409
               

               
Cow position:
               
chr18:48633940-48633623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
35, 46
               

               
Conread position:
               
68-485
               

               
Cow position:
               
chr18:42431929-42432333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 80
               

               
Conread position:
               
68-523
               

               
Cow position:
               
chr18:5578458-5578018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
284, 72
               

               
Conread position:
               
68-526
               

               
Cow position:
               
chr18:55499233-55498777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 88
               

               
Conread position:
               
68-529
               

               
Cow position:
               
chr18:42747762-42747304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 179
               

               
Conread position:
               
68-553
               

               
Cow position:
               
chr18:3158420-3158919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 134
               

               
Conread position:
               
69-240
               

               
Cow position:
               
chr18:21143806-21143969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
156, 59
               

               
Conread position:
               
69-487
               

               
Cow position:
               
chr18:48713704-48713306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
281, 63
               

               
Conread position:
               
69-547
               

               
Cow position:
               
chr18:37002799-37002317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 50
               

               
Conread position:
               
70-336
               

               
Cow position:
               
chr18:49015277-49015030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
226, 51
               

               
Conread position:
               
70-340
               

               
Cow position:
               
chr18:35367044-35367286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
115, 29
               

               
Conread position:
               
71-526
               

               
Cow position:
               
chr18:5766569-5766140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
10, 66
               

               
Conread position:
               
72-521
               

               
Cow position:
               
chr18:3193868-3193439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 65
               

               
Conread position:
               
77-240
               

               
Cow position:
               
chr18:306562-306724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
78-229
               

               
Cow position:
               
chr18:44548593-44548740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
78-295
               

               
Cow position:
               
chr18:40047351-40047555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
78-311
               

               
Cow position:
               
chr18:22516383-22516608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
219, 67
               

               
Conread position:
               
78-380
               

               
Cow position:
               
chr18:49841436-49841138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
71, 18
               

               
Conread position:
               
78-483
               

               
Cow position:
               
chr18:33008237-33007813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 29
               

               
Conread position:
               
78-549
               

               
Cow position:
               
chr18:26999042-26998552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 105
               

               
Conread position:
               
78-549
               

               
Cow position:
               
chr18:42454866-42455332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
232, 103
               

               
Conread position:
               
79-324
               

               
Cow position:
               
chr18:14830706-14830928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
79-379
               

               
Cow position:
               
chr18:24266251-24266549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
65, 90
               

               
Conread position:
               
79-527
               

               
Cow position:
               
chr18:11184091-11183652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 72
               

               
Conread position:
               
80-255
               

               
Cow position:
               
chr18:43125228-43125066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
84-536
               

               
Cow position:
               
chr18:29356486-29356928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
223, 66
               

               
Conread position:
               
87-365
               

               
Cow position:
               
chr18:34834640-34834365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 81
               

               
Conread position:
               
94-554
               

               
Cow position:
               
chr18:55000600-55001056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 50
               

               
Conread position:
               
97-483
               

               
Cow position:
               
chr18:3017950-3018322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
44, 97
               

               
Conread position:
               
98-431
               

               
Cow position:
               
chr18:8300158-8299822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 113
               

               
Conread position:
               
120-420
               

               
Cow position:
               
chr18:21740702-21740990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
230, 11
               

               
Conread position:
               
122-312
               

               
Cow position:
               
chr18:23505443-23505256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
22, 40
               

               
Conread position:
               
124-422
               

               
Cow position:
               
chr18:36201518-36201808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
179, 118
               

               
Conread position:
               
126-434
               

               
Cow position:
               
chr18:27109185-27109491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
224, 36
               

               
Conread position:
               
127-318
               

               
Cow position:
               
chr18:47705338-47705155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
128-555
               

               
Cow position:
               
chr18:29058399-29058813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 28
               

               
Conread position:
               
131-368
               

               
Cow position:
               
chr18:19883634-19883401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
96, 29
               

               
Conread position:
               
131-380
               

               
Cow position:
               
chr18:16997355-16997112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
43, 19
               

               
Conread position:
               
132-426
               

               
Cow position:
               
chr18:51190495-51190777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
25, 98
               

               
Conread position:
               
132-536
               

               
Cow position:
               
chr18:25647147-25647548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 30
               

               
Conread position:
               
132-537
               

               
Cow position:
               
chr18:46727692-46727293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 46
               

               
Conread position:
               
134-336
               

               
Cow position:
               
chr18:11312838-11313034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
153, 16
               

               
Conread position:
               
134-546
               

               
Cow position:
               
chr18:43020304-43020695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
353, 29
               

               
Conread position:
               
136-534
               

               
Cow position:
               
chr18:22214586-22214189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
163, 27
               

               
Conread position:
               
136-555
               

               
Cow position:
               
chr18:4539788-4540193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
214, 8
               

               
Conread position:
               
139-428
               

               
Cow position:
               
chr18:16686238-16686525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
33, 104
               

               
Conread position:
               
139-555
               

               
Cow position:
               
chr18:19272999-19273420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
10, 26
               

               
Conread position:
               
139-555
               

               
Cow position:
               
chr18:36459026-36458613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 24
               

               
Conread position:
               
147-529
               

               
Cow position:
               
chr18:50082170-50082538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
349, 15
               

               
Conread position:
               
147-555
               

               
Cow position:
               
chr18:19620028-19619629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
288, 15
               

               
Conread position:
               
148-536
               

               
Cow position:
               
chr18:51212270-51211883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 67
               

               
Conread position:
               
149-450
               

               
Cow position:
               
chr18:46135827-46135533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
58, 63
               

               
Conread position:
               
149-523
               

               
Cow position:
               
chr18:55788007-55787641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
201, 59
               

               
Conread position:
               
150-552
               

               
Cow position:
               
chr18:38687163-38686777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 14
               

               
Conread position:
               
151-505
               

               
Cow position:
               
chr18:30794509-30794170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 11
               

               
Conread position:
               
151-523
               

               
Cow position:
               
chr18:36230644-36230997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
109, 11
               

               
Conread position:
               
151-553
               

               
Cow position:
               
chr18:17005344-17004931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 89
               

               
Conread position:
               
152-484
               

               
Cow position:
               
chr18:47828901-47828585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
198, 82
               

               
Conread position:
               
153-478
               

               
Cow position:
               
chr18:24855763-24856083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
59, 10
               

               
Conread position:
               
153-502
               

               
Cow position:
               
chr18:29796347-29796686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
197, 11
               

               
Conread position:
               
153-525
               

               
Cow position:
               
chr18:25282472-25282843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
101, 86
               

               
Conread position:
               
153-536
               

               
Cow position:
               
chr18:20127024-20127401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
134, 10
               

               
Conread position:
               
154-526
               

               
Cow position:
               
chr18:38344887-38344515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
143, 86
               

               
Conread position:
               
155-528
               

               
Cow position:
               
chr18:23766329-23766707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 103
               

               
Conread position:
               
161-529
               

               
Cow position:
               
chr18:47517131-47517500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
93, 10
               

               
Conread position:
               
162-379
               

               
Cow position:
               
chr18:25006420-25006628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
179, 85
               

               
Conread position:
               
162-443
               

               
Cow position:
               
chr18:48452144-48451849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
80, 110
               

               
Conread position:
               
162-555
               

               
Cow position:
               
chr18:38607294-38606915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
92, 52
               

               
Conread position:
               
162-555
               

               
Cow position:
               
chr18:44801816-44802204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
326, 89
               

               
Conread position:
               
162-555
               

               
Cow position:
               
chr18:45571085-45570703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
336, 32
               

               
Conread position:
               
162-555
               

               
Cow position:
               
chr18:49100295-49100690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 80
               

               
Conread position:
               
162-555
               

               
Cow position:
               
chr18:50637400-50637781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
149, 41
               

               
Conread position:
               
163-530
               

               
Cow position:
               
chr18:31586303-31586657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
227, 78
               

               
Conread position:
               
163-533
               

               
Cow position:
               
chr18:11685054-11684694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 77
               

               
Conread position:
               
163-543
               

               
Cow position:
               
chr18:21102704-21103068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
16, 29
               

               
Conread position:
               
164-337
               

               
Cow position:
               
chr18:17660489-17660654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
164-358
               

               
Cow position:
               
chr18:52406763-52406583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
164-404
               

               
Cow position:
               
chr18:3370971-3370734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
139, 67
               

               
Conread position:
               
164-526
               

               
Cow position:
               
chr18:28923776-28924121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 77
               

               
Conread position:
               
164-526
               

               
Cow position:
               
chr18:34527024-34527387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 45
               

               
Conread position:
               
164-554
               

               
Cow position:
               
chr18:33299975-33299584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 78
               

               
Conread position:
               
165-330
               

               
Cow position:
               
chr18:9176969-9176811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
165-555
               

               
Cow position:
               
chr18:4182118-4182508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
183, 26
               

               
Conread position:
               
166-555
               

               
Cow position:
               
chr18:13507671-13508047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 43
               

               
Conread position:
               
169-538
               

               
Cow position:
               
chr18:4381359-4380994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
181, 25
               

               
Conread position:
               
176-536
               

               
Cow position:
               
chr18:44483714-44484057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
269, 76
               

               
Conread position:
               
177-428
               

               
Cow position:
               
chr18:7077013-7076771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
188, 65
               

               
Conread position:
               
186-540
               

               
Cow position:
               
chr18:25206139-25206495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 65
               

               
Conread position:
               
192-546
               

               
Cow position:
               
chr18:5487285-5486944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 42
               

               
Conread position:
               
193-532
               

               
Cow position:
               
chr18:6609815-6610153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
29, 59
               

               
Conread position:
               
194-489
               

               
Cow position:
               
chr18:25984530-25984823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
156, 49
               

               
Conread position:
               
195-527
               

               
Cow position:
               
chr18:21176227-21175890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
116, 45
               

               
Conread position:
               
199-555
               

               
Cow position:
               
chr18:15880808-15881175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 53
               

               
Conread position:
               
200-555
               

               
Cow position:
               
chr18:11618503-11618161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 58
               

               
Conread position:
               
201-463
               

               
Cow position:
               
chr18:2863956-2864222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
98, 50
               

               
Conread position:
               
207-555
               

               
Cow position:
               
chr18:11832148-11831817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
293, 45
               

               
Conread position:
               
209-519
               

               
Cow position:
               
chr18:6103071-6103396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
88, 33
               

               
Conread position:
               
211-554
               

               
Cow position:
               
chr18:43065554-43065192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
84, 48
               

               
Conread position:
               
211-555
               

               
Cow position:
               
chr18:8104915-8105264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 44
               

               
Conread position:
               
212-526
               

               
Cow position:
               
chr18:33407640-33407322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 39
               

               
Conread position:
               
216-528
               

               
Cow position:
               
chr18:4796991-4796678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 26
               

               
Conread position:
               
223-389
               

               
Cow position:
               
chr18:29991498-29991667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
88, 28
               

               
Conread position:
               
225-555
               

               
Cow position:
               
chr18:7487261-7486931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
5, 17
               

               
Conread position:
               
231-554
               

               
Cow position:
               
chr18:30248132-30248448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
267, 28
               

               
Conread position:
               
231-555
               

               
Cow position:
               
chr18:44548908-44549225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 11
               

               
Conread position:
               
235-428
               

               
Cow position:
               
chr18:4602011-4602198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
115, 19
               

               
Conread position:
               
247-536
               

               
Cow position:
               
chr18:33606623-33606337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
7, 50
               

               
Conread position:
               
247-554
               

               
Cow position:
               
chr18:81737-81436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
51, 7
               

               
Conread position:
               
254-555
               

               
Cow position:
               
chr18:56150659-56150977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
50, 146
               

               
Conread position:
               
257-472
               

               
Cow position:
               
chr18:219321-219100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
258-502
               

               
Cow position:
               
chr18:35582117-35582363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
63, 240
               

               
Conread position:
               
265-536
               

               
Cow position:
               
chr18:11680697-11680421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
85, 28
               

               
Conread position:
               
269-497
               

               
Cow position:
               
chr18:8164064-8164297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
39, 46
               

               
Conread position:
               
272-555
               

               
Cow position:
               
chr18:29388188-29387906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
33, 43
               

               
Conread position:
               
351-555
               

               
Cow position:
               
chr18:11811865-11811656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
148, 74
               
Show alignments to all cow chromosomes.