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Cow genome map

           
Conread name:
           
rpro40_a11.y1
        

               
Conread position:
               
7-552
               

               
Cow position:
               
chr19:20622906-20622368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 17
               

               
Conread position:
               
12-349
               

               
Cow position:
               
chr19:7147813-7148152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 12
               

               
Conread position:
               
24-525
               

               
Cow position:
               
chr19:1968084-1968571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 120
               

               
Conread position:
               
37-289
               

               
Cow position:
               
chr19:55438925-55438674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
23, 5
               

               
Conread position:
               
39-250
               

               
Cow position:
               
chr19:2358293-2358079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
27, 163
               

               
Conread position:
               
42-371
               

               
Cow position:
               
chr19:19549343-19549658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 99
               

               
Conread position:
               
44-522
               

               
Cow position:
               
chr19:41946392-41945926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 98
               

               
Conread position:
               
45-301
               

               
Cow position:
               
chr19:18921013-18921288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
45-555
               

               
Cow position:
               
chr19:22765822-22765317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 53
               

               
Conread position:
               
46-521
               

               
Cow position:
               
chr19:35380333-35380811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
91, 98
               

               
Conread position:
               
47-217
               

               
Cow position:
               
chr19:41388966-41388802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
47-432
               

               
Cow position:
               
chr19:38500362-38499997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
55, 90
               

               
Conread position:
               
47-525
               

               
Cow position:
               
chr19:10186714-10186233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 189
               

               
Conread position:
               
47-555
               

               
Cow position:
               
chr19:34955509-34955997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 23
               

               
Conread position:
               
48-245
               

               
Cow position:
               
chr19:2793452-2793646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
10, 128
               

               
Conread position:
               
48-300
               

               
Cow position:
               
chr19:28810113-28810357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
159, 14
               

               
Conread position:
               
48-305
               

               
Cow position:
               
chr19:23756545-23756787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 94
               

               
Conread position:
               
48-380
               

               
Cow position:
               
chr19:11439317-11438990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
61, 31
               

               
Conread position:
               
48-389
               

               
Cow position:
               
chr19:23378885-23378559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 106
               

               
Conread position:
               
48-505
               

               
Cow position:
               
chr19:55247837-55247383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
45, 7
               

               
Conread position:
               
48-555
               

               
Cow position:
               
chr19:19804317-19804832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
101, 30
               

               
Conread position:
               
49-279
               

               
Cow position:
               
chr19:39981943-39981717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
221, 113
               

               
Conread position:
               
49-295
               

               
Cow position:
               
chr19:10908829-10908605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
141, 102
               

               
Conread position:
               
49-527
               

               
Cow position:
               
chr19:56063238-56063698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
253, 82
               

               
Conread position:
               
49-536
               

               
Cow position:
               
chr19:11376215-11376683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 85
               

               
Conread position:
               
49-538
               

               
Cow position:
               
chr19:54943165-54942695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
276, 24
               

               
Conread position:
               
49-555
               

               
Cow position:
               
chr19:44838736-44839194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
435, 91
               

               
Conread position:
               
50-197
               

               
Cow position:
               
chr19:52608531-52608394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
50-234
               

               
Cow position:
               
chr19:12264159-12263987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
50-348
               

               
Cow position:
               
chr19:12052642-12052933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 100
               

               
Conread position:
               
50-348
               

               
Cow position:
               
chr19:12067949-12067658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 100
               

               
Conread position:
               
50-434
               

               
Cow position:
               
chr19:47453634-47453262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 5
               

               
Conread position:
               
50-529
               

               
Cow position:
               
chr19:33033241-33033717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
233, 82
               

               
Conread position:
               
51-217
               

               
Cow position:
               
chr19:42217110-42217276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
81, 111
               

               
Conread position:
               
51-283
               

               
Cow position:
               
chr19:11194562-11194785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
68, 95
               

               
Conread position:
               
51-381
               

               
Cow position:
               
chr19:2220873-2221198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
252, 16
               

               
Conread position:
               
51-491
               

               
Cow position:
               
chr19:28554150-28554579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
143, 25
               

               
Conread position:
               
51-507
               

               
Cow position:
               
chr19:43413979-43413535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 17
               

               
Conread position:
               
51-538
               

               
Cow position:
               
chr19:26057349-26057828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 68
               

               
Conread position:
               
51-555
               

               
Cow position:
               
chr19:6417811-6417300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 106
               

               
Conread position:
               
51-555
               

               
Cow position:
               
chr19:8128510-8128016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
331, 112
               

               
Conread position:
               
51-555
               

               
Cow position:
               
chr19:12698519-12698027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
246, 30
               

               
Conread position:
               
52-235
               

               
Cow position:
               
chr19:4602494-4602672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
13, 68
               

               
Conread position:
               
52-239
               

               
Cow position:
               
chr19:7864256-7864075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
52-245
               

               
Cow position:
               
chr19:42776634-42776445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
120, 24
               

               
Conread position:
               
52-247
               

               
Cow position:
               
chr19:30927999-30927807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
52-255
               

               
Cow position:
               
chr19:6855118-6854923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
199, 99
               

               
Conread position:
               
52-255
               

               
Cow position:
               
chr19:41946922-41946718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
134, 107
               

               
Conread position:
               
52-256
               

               
Cow position:
               
chr19:46822911-46822711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
18, 99
               

               
Conread position:
               
52-279
               

               
Cow position:
               
chr19:12279925-12279711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
202, 16
               

               
Conread position:
               
52-279
               

               
Cow position:
               
chr19:52728813-52728593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
11, 100
               

               
Conread position:
               
52-282
               

               
Cow position:
               
chr19:24693204-24692986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
52-286
               

               
Cow position:
               
chr19:44572290-44572057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
14, 180
               

               
Conread position:
               
52-295
               

               
Cow position:
               
chr19:18054059-18054291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
52-300
               

               
Cow position:
               
chr19:38732338-38732099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
52-301
               

               
Cow position:
               
chr19:26269023-26269269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
14, 196
               

               
Conread position:
               
52-306
               

               
Cow position:
               
chr19:41497442-41497691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
243, 26
               

               
Conread position:
               
52-331
               

               
Cow position:
               
chr19:34757787-34758068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
18, 121
               

               
Conread position:
               
52-337
               

               
Cow position:
               
chr19:23889286-23889556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
52-337
               

               
Cow position:
               
chr19:39584148-39583866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
142, 27
               

               
Conread position:
               
52-378
               

               
Cow position:
               
chr19:26754238-26753922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
124, 24
               

               
Conread position:
               
52-410
               

               
Cow position:
               
chr19:52158743-52158386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 92
               

               
Conread position:
               
52-424
               

               
Cow position:
               
chr19:52187685-52187332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
249, 99
               

               
Conread position:
               
52-439
               

               
Cow position:
               
chr19:9531449-9531055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
142, 22
               

               
Conread position:
               
52-448
               

               
Cow position:
               
chr19:55957367-55957762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
97, 24
               

               
Conread position:
               
52-506
               

               
Cow position:
               
chr19:43035444-43034995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 101
               

               
Conread position:
               
52-518
               

               
Cow position:
               
chr19:3621630-3621168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 19
               

               
Conread position:
               
52-536
               

               
Cow position:
               
chr19:7053142-7053611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 51
               

               
Conread position:
               
52-536
               

               
Cow position:
               
chr19:36060160-36059654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 45
               

               
Conread position:
               
52-536
               

               
Cow position:
               
chr19:36845445-36844971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
330, 24
               

               
Conread position:
               
52-536
               

               
Cow position:
               
chr19:41024424-41023951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 95
               

               
Conread position:
               
52-540
               

               
Cow position:
               
chr19:7668893-7668418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
251, 15
               

               
Conread position:
               
52-540
               

               
Cow position:
               
chr19:23304290-23304777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
277, 10
               

               
Conread position:
               
52-555
               

               
Cow position:
               
chr19:10755500-10755013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
249, 16
               

               
Conread position:
               
52-555
               

               
Cow position:
               
chr19:53658100-53657601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
51, 46
               

               
Conread position:
               
53-222
               

               
Cow position:
               
chr19:19738203-19738035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
126, 110
               

               
Conread position:
               
53-302
               

               
Cow position:
               
chr19:10734961-10735200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
13, 50
               

               
Conread position:
               
53-359
               

               
Cow position:
               
chr19:25954520-25954836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
16, 118
               

               
Conread position:
               
53-424
               

               
Cow position:
               
chr19:24005850-24005510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
297, 10
               

               
Conread position:
               
53-498
               

               
Cow position:
               
chr19:11758431-11758838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
297, 9
               

               
Conread position:
               
53-529
               

               
Cow position:
               
chr19:42695189-42694717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
249, 79
               

               
Conread position:
               
53-536
               

               
Cow position:
               
chr19:6079150-6079627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 180
               

               
Conread position:
               
53-555
               

               
Cow position:
               
chr19:11003427-11003931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
111, 92
               

               
Conread position:
               
53-555
               

               
Cow position:
               
chr19:39622585-39623081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
78, 27
               

               
Conread position:
               
54-238
               

               
Cow position:
               
chr19:11211076-11211263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
164, 94
               

               
Conread position:
               
54-283
               

               
Cow position:
               
chr19:53378898-53378679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
86, 16
               

               
Conread position:
               
54-360
               

               
Cow position:
               
chr19:39384846-39385136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
10, 49
               

               
Conread position:
               
54-484
               

               
Cow position:
               
chr19:33903225-33903645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 80
               

               
Conread position:
               
54-488
               

               
Cow position:
               
chr19:51620979-51621410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
205, 22
               

               
Conread position:
               
54-520
               

               
Cow position:
               
chr19:56149866-56150329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
242, 15
               

               
Conread position:
               
54-522
               

               
Cow position:
               
chr19:12747578-12748029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
91, 38
               

               
Conread position:
               
54-549
               

               
Cow position:
               
chr19:17664850-17664350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 150
               

               
Conread position:
               
54-555
               

               
Cow position:
               
chr19:16096353-16096852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 104
               

               
Conread position:
               
55-234
               

               
Cow position:
               
chr19:10385368-10385543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
85, 97
               

               
Conread position:
               
55-236
               

               
Cow position:
               
chr19:17260109-17259928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
12, 46
               

               
Conread position:
               
55-237
               

               
Cow position:
               
chr19:22414068-22414246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
12, 86
               

               
Conread position:
               
55-239
               

               
Cow position:
               
chr19:43896499-43896326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
55-254
               

               
Cow position:
               
chr19:23559583-23559385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
65, 84
               

               
Conread position:
               
55-256
               

               
Cow position:
               
chr19:33610086-33609891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
55-266
               

               
Cow position:
               
chr19:5521961-5522163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
55-269
               

               
Cow position:
               
chr19:11816524-11816732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
17, 75
               

               
Conread position:
               
55-295
               

               
Cow position:
               
chr19:26167717-26167947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
55-303
               

               
Cow position:
               
chr19:40324019-40323776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
55-304
               

               
Cow position:
               
chr19:31760292-31760051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
187, 126
               

               
Conread position:
               
55-332
               

               
Cow position:
               
chr19:10238936-10238666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 95
               

               
Conread position:
               
55-390
               

               
Cow position:
               
chr19:25035701-25035357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
9, 216
               

               
Conread position:
               
55-413
               

               
Cow position:
               
chr19:52185559-52185921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
71, 189
               

               
Conread position:
               
55-480
               

               
Cow position:
               
chr19:16621155-16621574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 101
               

               
Conread position:
               
55-491
               

               
Cow position:
               
chr19:52456557-52456991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 17
               

               
Conread position:
               
55-492
               

               
Cow position:
               
chr19:25382484-25382936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
94, 110
               

               
Conread position:
               
55-505
               

               
Cow position:
               
chr19:30471159-30471580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
55-505
               

               
Cow position:
               
chr19:55590433-55589990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 108
               

               
Conread position:
               
55-526
               

               
Cow position:
               
chr19:50562881-50562418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
268, 107
               

               
Conread position:
               
55-529
               

               
Cow position:
               
chr19:39361351-39360869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 145
               

               
Conread position:
               
55-540
               

               
Cow position:
               
chr19:24145219-24144736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 39
               

               
Conread position:
               
55-555
               

               
Cow position:
               
chr19:254600-255091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
94, 65
               

               
Conread position:
               
55-555
               

               
Cow position:
               
chr19:1355804-1355313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
251, 126
               

               
Conread position:
               
55-555
               

               
Cow position:
               
chr19:14253833-14253334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
295, 108
               

               
Conread position:
               
55-555
               

               
Cow position:
               
chr19:21199348-21198827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 203
               

               
Conread position:
               
55-555
               

               
Cow position:
               
chr19:30232908-30232434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
474, 41
               

               
Conread position:
               
55-555
               

               
Cow position:
               
chr19:38393005-38392497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 21
               

               
Conread position:
               
55-555
               

               
Cow position:
               
chr19:39576373-39576869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 88
               

               
Conread position:
               
56-215
               

               
Cow position:
               
chr19:53086806-53086650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
46, 14
               

               
Conread position:
               
56-236
               

               
Cow position:
               
chr19:20694063-20693891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
15, 87
               

               
Conread position:
               
56-237
               

               
Cow position:
               
chr19:27968499-27968676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
56-248
               

               
Cow position:
               
chr19:22871059-22871247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
184, 95
               

               
Conread position:
               
56-295
               

               
Cow position:
               
chr19:27965948-27966181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
138, 127
               

               
Conread position:
               
56-295
               

               
Cow position:
               
chr19:30007382-30007157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
56-304
               

               
Cow position:
               
chr19:38021639-38021400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
198, 107
               

               
Conread position:
               
56-327
               

               
Cow position:
               
chr19:39758718-39758456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
78, 44
               

               
Conread position:
               
56-417
               

               
Cow position:
               
chr19:46094430-46094795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
67, 189
               

               
Conread position:
               
56-466
               

               
Cow position:
               
chr19:22043160-22043549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
294, 94
               

               
Conread position:
               
56-500
               

               
Cow position:
               
chr19:8864941-8864510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
17, 108
               

               
Conread position:
               
56-517
               

               
Cow position:
               
chr19:5115697-5116126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
367, 12
               

               
Conread position:
               
56-523
               

               
Cow position:
               
chr19:17796103-17795631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 18
               

               
Conread position:
               
56-540
               

               
Cow position:
               
chr19:10081287-10080787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 119
               

               
Conread position:
               
56-554
               

               
Cow position:
               
chr19:33912429-33912932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
255, 106
               

               
Conread position:
               
56-554
               

               
Cow position:
               
chr19:40051199-40051684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 39
               

               
Conread position:
               
56-555
               

               
Cow position:
               
chr19:13130061-13129594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
241, 63
               

               
Conread position:
               
56-555
               

               
Cow position:
               
chr19:20661215-20661717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 72
               

               
Conread position:
               
56-555
               

               
Cow position:
               
chr19:39751667-39751185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 14
               

               
Conread position:
               
57-232
               

               
Cow position:
               
chr19:35072855-35073028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
57-245
               

               
Cow position:
               
chr19:1614970-1614786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
57-253
               

               
Cow position:
               
chr19:5261536-5261337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
92, 133
               

               
Conread position:
               
57-269
               

               
Cow position:
               
chr19:53189656-53189867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
92, 11
               

               
Conread position:
               
57-294
               

               
Cow position:
               
chr19:21836040-21836272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
57-336
               

               
Cow position:
               
chr19:33575715-33575449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
57-365
               

               
Cow position:
               
chr19:20665871-20666175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
278, 127
               

               
Conread position:
               
57-380
               

               
Cow position:
               
chr19:6278384-6278064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
292, 135
               

               
Conread position:
               
57-380
               

               
Cow position:
               
chr19:11110533-11110851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
94, 109
               

               
Conread position:
               
57-380
               

               
Cow position:
               
chr19:33518614-33518933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
240, 120
               

               
Conread position:
               
57-402
               

               
Cow position:
               
chr19:6334329-6334016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
12, 71
               

               
Conread position:
               
57-441
               

               
Cow position:
               
chr19:31127155-31127547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
202, 105
               

               
Conread position:
               
57-443
               

               
Cow position:
               
chr19:12709602-12709996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
36, 201
               

               
Conread position:
               
57-455
               

               
Cow position:
               
chr19:24759692-24760078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 13
               

               
Conread position:
               
57-503
               

               
Cow position:
               
chr19:34288211-34287787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 93
               

               
Conread position:
               
57-538
               

               
Cow position:
               
chr19:55951968-55952423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
293, 39
               

               
Conread position:
               
57-554
               

               
Cow position:
               
chr19:24062471-24061998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 76
               

               
Conread position:
               
57-555
               

               
Cow position:
               
chr19:729552-730030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
293, 39
               

               
Conread position:
               
57-555
               

               
Cow position:
               
chr19:33748048-33747553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
239, 35
               

               
Conread position:
               
58-238
               

               
Cow position:
               
chr19:14596890-14596708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
76, 97
               

               
Conread position:
               
58-255
               

               
Cow position:
               
chr19:12714297-12714102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
136, 101
               

               
Conread position:
               
58-257
               

               
Cow position:
               
chr19:31729460-31729263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
131, 18
               

               
Conread position:
               
58-269
               

               
Cow position:
               
chr19:13996230-13996438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
193, 0
               

               
Conread position:
               
58-269
               

               
Cow position:
               
chr19:52356446-52356243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
58-301
               

               
Cow position:
               
chr19:37466866-37467103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 83
               

               
Conread position:
               
58-356
               

               
Cow position:
               
chr19:40126970-40127261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
237, 87
               

               
Conread position:
               
58-465
               

               
Cow position:
               
chr19:34166563-34166160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
324, 44
               

               
Conread position:
               
58-529
               

               
Cow position:
               
chr19:47671927-47671481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 10
               

               
Conread position:
               
58-555
               

               
Cow position:
               
chr19:4587533-4588020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 38
               

               
Conread position:
               
59-208
               

               
Cow position:
               
chr19:37646569-37646709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
59-239
               

               
Cow position:
               
chr19:14167815-14167622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
59-239
               

               
Cow position:
               
chr19:28137340-28137172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
59-246
               

               
Cow position:
               
chr19:31768440-31768619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
59-271
               

               
Cow position:
               
chr19:14823446-14823241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
63, 34
               

               
Conread position:
               
59-307
               

               
Cow position:
               
chr19:18504972-18505216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
239, 100
               

               
Conread position:
               
59-320
               

               
Cow position:
               
chr19:23088174-23087926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
59-337
               

               
Cow position:
               
chr19:11559841-11560118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 103
               

               
Conread position:
               
59-337
               

               
Cow position:
               
chr19:34420603-34420338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
59-432
               

               
Cow position:
               
chr19:38111662-38111301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
31, 82
               

               
Conread position:
               
59-448
               

               
Cow position:
               
chr19:42564340-42563950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 17
               

               
Conread position:
               
59-459
               

               
Cow position:
               
chr19:3217197-3216823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
284, 24
               

               
Conread position:
               
59-465
               

               
Cow position:
               
chr19:25673325-25673723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
38, 19
               

               
Conread position:
               
59-482
               

               
Cow position:
               
chr19:7158521-7158954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
117, 201
               

               
Conread position:
               
59-524
               

               
Cow position:
               
chr19:12155057-12154583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
34, 11
               

               
Conread position:
               
59-527
               

               
Cow position:
               
chr19:3811827-3812284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
7, 87
               

               
Conread position:
               
59-528
               

               
Cow position:
               
chr19:29368588-29368129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
291, 13
               

               
Conread position:
               
59-555
               

               
Cow position:
               
chr19:36222126-36221636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
187, 17
               

               
Conread position:
               
59-555
               

               
Cow position:
               
chr19:39246103-39245600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 58
               

               
Conread position:
               
60-465
               

               
Cow position:
               
chr19:36097416-36097017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
270, 16
               

               
Conread position:
               
60-478
               

               
Cow position:
               
chr19:42904185-42903802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
194, 39
               

               
Conread position:
               
61-253
               

               
Cow position:
               
chr19:36978463-36978271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
90, 122
               

               
Conread position:
               
61-288
               

               
Cow position:
               
chr19:25835145-25835355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
61-291
               

               
Cow position:
               
chr19:34654417-34654641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
13, 91
               

               
Conread position:
               
61-329
               

               
Cow position:
               
chr19:4459249-4459508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
11, 80
               

               
Conread position:
               
61-337
               

               
Cow position:
               
chr19:11646756-11646497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
61-448
               

               
Cow position:
               
chr19:48960585-48960208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 100
               

               
Conread position:
               
61-471
               

               
Cow position:
               
chr19:23784230-23784611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
10, 75
               

               
Conread position:
               
61-519
               

               
Cow position:
               
chr19:39776961-39777431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
180, 15
               

               
Conread position:
               
61-555
               

               
Cow position:
               
chr19:2577752-2577276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
372, 87
               

               
Conread position:
               
62-546
               

               
Cow position:
               
chr19:268539-268066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
288, 66
               

               
Conread position:
               
63-229
               

               
Cow position:
               
chr19:25572962-25572799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
88, 33
               

               
Conread position:
               
63-235
               

               
Cow position:
               
chr19:12686019-12685852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
63-255
               

               
Cow position:
               
chr19:4586359-4586545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
63-279
               

               
Cow position:
               
chr19:25832010-25832218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
38, 78
               

               
Conread position:
               
63-301
               

               
Cow position:
               
chr19:40002167-40002397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
139, 38
               

               
Conread position:
               
63-303
               

               
Cow position:
               
chr19:49221432-49221664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
191, 85
               

               
Conread position:
               
63-307
               

               
Cow position:
               
chr19:6344272-6344027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
69, 106
               

               
Conread position:
               
63-321
               

               
Cow position:
               
chr19:10538368-10538611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
251, 74
               

               
Conread position:
               
63-337
               

               
Cow position:
               
chr19:42767913-42768174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
63-380
               

               
Cow position:
               
chr19:14631851-14632154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
287, 77
               

               
Conread position:
               
63-389
               

               
Cow position:
               
chr19:19489629-19489946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
85, 20
               

               
Conread position:
               
63-431
               

               
Cow position:
               
chr19:15719438-15719787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
287, 33
               

               
Conread position:
               
63-477
               

               
Cow position:
               
chr19:17972079-17972475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 13
               

               
Conread position:
               
63-497
               

               
Cow position:
               
chr19:6532064-6531655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
287, 69
               

               
Conread position:
               
63-505
               

               
Cow position:
               
chr19:11191431-11191866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 40
               

               
Conread position:
               
63-525
               

               
Cow position:
               
chr19:50162185-50161749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
179, 85
               

               
Conread position:
               
63-528
               

               
Cow position:
               
chr19:15887126-15887592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 55
               

               
Conread position:
               
63-555
               

               
Cow position:
               
chr19:3245866-3246334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
66, 9
               

               
Conread position:
               
63-555
               

               
Cow position:
               
chr19:5185068-5185553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 85
               

               
Conread position:
               
63-555
               

               
Cow position:
               
chr19:15438295-15437809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 84
               

               
Conread position:
               
64-241
               

               
Cow position:
               
chr19:21790920-21790749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
64-284
               

               
Cow position:
               
chr19:49290269-49290478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
64-324
               

               
Cow position:
               
chr19:37067322-37067076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
64-337
               

               
Cow position:
               
chr19:47184891-47185157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
34, 88
               

               
Conread position:
               
64-528
               

               
Cow position:
               
chr19:29626089-29625635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
286, 96
               

               
Conread position:
               
65-245
               

               
Cow position:
               
chr19:47727234-47727405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
65-412
               

               
Cow position:
               
chr19:15853114-15852797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
65-428
               

               
Cow position:
               
chr19:35107704-35107362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
242, 42
               

               
Conread position:
               
65-465
               

               
Cow position:
               
chr19:25769862-25769457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
90, 78
               

               
Conread position:
               
65-545
               

               
Cow position:
               
chr19:48723221-48722741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 36
               

               
Conread position:
               
65-554
               

               
Cow position:
               
chr19:25726697-25727177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 35
               

               
Conread position:
               
65-555
               

               
Cow position:
               
chr19:35742376-35741857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 199
               

               
Conread position:
               
65-555
               

               
Cow position:
               
chr19:43702499-43703002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 32
               

               
Conread position:
               
66-300
               

               
Cow position:
               
chr19:10930239-10930456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
66-406
               

               
Cow position:
               
chr19:15091958-15092272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
66-464
               

               
Cow position:
               
chr19:25854693-25855107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
237, 10
               

               
Conread position:
               
68-245
               

               
Cow position:
               
chr19:51637230-51637053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
83, 172
               

               
Conread position:
               
68-249
               

               
Cow position:
               
chr19:33233767-33233591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
68-249
               

               
Cow position:
               
chr19:35623578-35623402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
79, 138
               

               
Conread position:
               
68-306
               

               
Cow position:
               
chr19:43373233-43372993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
81, 101
               

               
Conread position:
               
68-337
               

               
Cow position:
               
chr19:3497762-3498028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
71, 60
               

               
Conread position:
               
68-363
               

               
Cow position:
               
chr19:48744084-48744369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
24, 69
               

               
Conread position:
               
68-415
               

               
Cow position:
               
chr19:18129745-18129406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
80, 157
               

               
Conread position:
               
68-432
               

               
Cow position:
               
chr19:36139039-36138683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
281, 89
               

               
Conread position:
               
68-463
               

               
Cow position:
               
chr19:22449732-22450134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
103, 177
               

               
Conread position:
               
68-524
               

               
Cow position:
               
chr19:7637050-7637503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 80
               

               
Conread position:
               
68-538
               

               
Cow position:
               
chr19:15067824-15068273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 65
               

               
Conread position:
               
69-268
               

               
Cow position:
               
chr19:25916090-25915904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
69-471
               

               
Cow position:
               
chr19:32505924-32506320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
72, 101
               

               
Conread position:
               
69-555
               

               
Cow position:
               
chr19:12601986-12601512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
206, 63
               

               
Conread position:
               
70-311
               

               
Cow position:
               
chr19:12645464-12645694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
70-536
               

               
Cow position:
               
chr19:46455024-46454573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
360, 71
               

               
Conread position:
               
70-553
               

               
Cow position:
               
chr19:53623752-53623266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 146
               

               
Conread position:
               
70-555
               

               
Cow position:
               
chr19:6687815-6688305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 6
               

               
Conread position:
               
71-511
               

               
Cow position:
               
chr19:26975889-26976300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
428, 58
               

               
Conread position:
               
75-300
               

               
Cow position:
               
chr19:34608021-34608237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
75-445
               

               
Cow position:
               
chr19:25526457-25526101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
231, 52
               

               
Conread position:
               
75-514
               

               
Cow position:
               
chr19:35762077-35762513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 57
               

               
Conread position:
               
77-528
               

               
Cow position:
               
chr19:41585148-41584704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
273, 85
               

               
Conread position:
               
78-255
               

               
Cow position:
               
chr19:19916248-19916418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
78-329
               

               
Cow position:
               
chr19:33988244-33987997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
224, 73
               

               
Conread position:
               
78-344
               

               
Cow position:
               
chr19:13488331-13488587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
215, 67
               

               
Conread position:
               
78-389
               

               
Cow position:
               
chr19:42517079-42517385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 80
               

               
Conread position:
               
78-518
               

               
Cow position:
               
chr19:21378291-21378726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 47
               

               
Conread position:
               
78-528
               

               
Cow position:
               
chr19:10213843-10213401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 79
               

               
Conread position:
               
78-536
               

               
Cow position:
               
chr19:35018056-35018523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 95
               

               
Conread position:
               
78-552
               

               
Cow position:
               
chr19:27180065-27180553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 104
               

               
Conread position:
               
79-331
               

               
Cow position:
               
chr19:33913704-33913455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
175, 83
               

               
Conread position:
               
79-337
               

               
Cow position:
               
chr19:25763279-25763038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
224, 22
               

               
Conread position:
               
79-380
               

               
Cow position:
               
chr19:10929620-10929322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
52, 87
               

               
Conread position:
               
80-555
               

               
Cow position:
               
chr19:14472605-14473078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
69, 104
               

               
Conread position:
               
80-555
               

               
Cow position:
               
chr19:22779386-22778903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
69, 95
               

               
Conread position:
               
81-235
               

               
Cow position:
               
chr19:18050990-18051143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
54, 78
               

               
Conread position:
               
81-331
               

               
Cow position:
               
chr19:28447612-28447371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
17, 71
               

               
Conread position:
               
81-374
               

               
Cow position:
               
chr19:23832415-23832704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
24, 84
               

               
Conread position:
               
81-382
               

               
Cow position:
               
chr19:23394957-23394665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
235, 79
               

               
Conread position:
               
81-527
               

               
Cow position:
               
chr19:27612008-27612436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 9
               

               
Conread position:
               
82-425
               

               
Cow position:
               
chr19:21817137-21816798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
92, 81
               

               
Conread position:
               
84-555
               

               
Cow position:
               
chr19:39057417-39056945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 79
               

               
Conread position:
               
86-438
               

               
Cow position:
               
chr19:54121432-54121101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
264, 69
               

               
Conread position:
               
92-529
               

               
Cow position:
               
chr19:1664022-1664465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 151
               

               
Conread position:
               
97-527
               

               
Cow position:
               
chr19:10545550-10545977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 58
               

               
Conread position:
               
97-555
               

               
Cow position:
               
chr19:44143783-44144205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
326, 42
               

               
Conread position:
               
103-377
               

               
Cow position:
               
chr19:47987007-47986740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
192, 43
               

               
Conread position:
               
103-555
               

               
Cow position:
               
chr19:23786326-23785888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
247, 42
               

               
Conread position:
               
107-300
               

               
Cow position:
               
chr19:24253157-24253339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
147, 16
               

               
Conread position:
               
108-555
               

               
Cow position:
               
chr19:18786164-18786625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 147
               

               
Conread position:
               
115-359
               

               
Cow position:
               
chr19:16104945-16105180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
235, 46
               

               
Conread position:
               
115-493
               

               
Cow position:
               
chr19:55930034-55930407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
75, 47
               

               
Conread position:
               
124-364
               

               
Cow position:
               
chr19:25853701-25853465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
115, 16
               

               
Conread position:
               
124-424
               

               
Cow position:
               
chr19:25807175-25807465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
226, 40
               

               
Conread position:
               
130-554
               

               
Cow position:
               
chr19:23222754-23222344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 20
               

               
Conread position:
               
131-417
               

               
Cow position:
               
chr19:39485440-39485163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
169, 26
               

               
Conread position:
               
132-307
               

               
Cow position:
               
chr19:12705713-12705884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
17, 33
               

               
Conread position:
               
132-309
               

               
Cow position:
               
chr19:28135684-28135514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
132-555
               

               
Cow position:
               
chr19:6516392-6515961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 30
               

               
Conread position:
               
132-555
               

               
Cow position:
               
chr19:16693904-16694345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 129
               

               
Conread position:
               
132-555
               

               
Cow position:
               
chr19:34619901-34620334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 82
               

               
Conread position:
               
135-519
               

               
Cow position:
               
chr19:6049557-6049922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
215, 10
               

               
Conread position:
               
137-517
               

               
Cow position:
               
chr19:11565033-11565407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
29, 25
               

               
Conread position:
               
138-523
               

               
Cow position:
               
chr19:33469137-33468759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 24
               

               
Conread position:
               
139-540
               

               
Cow position:
               
chr19:19919345-19919739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 24
               

               
Conread position:
               
141-484
               

               
Cow position:
               
chr19:52480100-52479781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
166, 35
               

               
Conread position:
               
142-455
               

               
Cow position:
               
chr19:25628019-25628326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 102
               

               
Conread position:
               
145-540
               

               
Cow position:
               
chr19:8332410-8332013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 16
               

               
Conread position:
               
147-555
               

               
Cow position:
               
chr19:24358134-24358523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
349, 16
               

               
Conread position:
               
149-555
               

               
Cow position:
               
chr19:14593163-14592754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 13
               

               
Conread position:
               
150-378
               

               
Cow position:
               
chr19:11212293-11212516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
151, 16
               

               
Conread position:
               
150-524
               

               
Cow position:
               
chr19:15862943-15863304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
72, 91
               

               
Conread position:
               
151-555
               

               
Cow position:
               
chr19:8375197-8375601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 11
               

               
Conread position:
               
152-540
               

               
Cow position:
               
chr19:31846446-31846824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
43, 11
               

               
Conread position:
               
152-555
               

               
Cow position:
               
chr19:24669273-24669668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
282, 100
               

               
Conread position:
               
153-465
               

               
Cow position:
               
chr19:33290586-33290278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
228, 9
               

               
Conread position:
               
161-359
               

               
Cow position:
               
chr19:3834369-3834177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
161-483
               

               
Cow position:
               
chr19:55967606-55967912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
162-320
               

               
Cow position:
               
chr19:6154497-6154658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
162-322
               

               
Cow position:
               
chr19:1853948-1854102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
12, 74
               

               
Conread position:
               
162-464
               

               
Cow position:
               
chr19:25655131-25655441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
17, 90
               

               
Conread position:
               
162-514
               

               
Cow position:
               
chr19:20310544-20310886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
337, 86
               

               
Conread position:
               
162-528
               

               
Cow position:
               
chr19:21363342-21363711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 80
               

               
Conread position:
               
162-528
               

               
Cow position:
               
chr19:36722404-36722062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
162-552
               

               
Cow position:
               
chr19:17478865-17479254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 41
               

               
Conread position:
               
162-554
               

               
Cow position:
               
chr19:5656029-5656409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 89
               

               
Conread position:
               
162-555
               

               
Cow position:
               
chr19:9541805-9542197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 14
               

               
Conread position:
               
162-555
               

               
Cow position:
               
chr19:31595396-31594999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
214, 79
               

               
Conread position:
               
163-502
               

               
Cow position:
               
chr19:34001301-34000972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
163-505
               

               
Cow position:
               
chr19:22798983-22799326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
111, 88
               

               
Conread position:
               
163-540
               

               
Cow position:
               
chr19:4503314-4502936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
131, 71
               

               
Conread position:
               
164-555
               

               
Cow position:
               
chr19:20670813-20671201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 76
               

               
Conread position:
               
164-555
               

               
Cow position:
               
chr19:43441261-43440863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 85
               

               
Conread position:
               
167-396
               

               
Cow position:
               
chr19:13757341-13757117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
53, 15
               

               
Conread position:
               
167-555
               

               
Cow position:
               
chr19:8033838-8033439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 45
               

               
Conread position:
               
168-295
               

               
Cow position:
               
chr19:37633136-37633260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
168-448
               

               
Cow position:
               
chr19:10242667-10242397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
182, 14
               

               
Conread position:
               
168-555
               

               
Cow position:
               
chr19:30534018-30533642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 32
               

               
Conread position:
               
175-313
               

               
Cow position:
               
chr19:45396435-45396571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
15, 68
               

               
Conread position:
               
189-554
               

               
Cow position:
               
chr19:25999686-25999336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
310, 20
               

               
Conread position:
               
190-420
               

               
Cow position:
               
chr19:32505688-32505903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
122, 41
               

               
Conread position:
               
190-537
               

               
Cow position:
               
chr19:47110108-47109764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
64, 51
               

               
Conread position:
               
190-555
               

               
Cow position:
               
chr19:2734517-2734152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
160, 51
               

               
Conread position:
               
193-555
               

               
Cow position:
               
chr19:42240231-42240591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 52
               

               
Conread position:
               
204-555
               

               
Cow position:
               
chr19:1505178-1504846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
99, 41
               

               
Conread position:
               
208-555
               

               
Cow position:
               
chr19:37646787-37647141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 34
               

               
Conread position:
               
213-527
               

               
Cow position:
               
chr19:38637774-38638070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
244, 28
               

               
Conread position:
               
221-410
               

               
Cow position:
               
chr19:4092549-4092361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
74, 17
               

               
Conread position:
               
221-436
               

               
Cow position:
               
chr19:13729800-13730011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
74, 122
               

               
Conread position:
               
225-528
               

               
Cow position:
               
chr19:15767235-15766946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
86, 32
               

               
Conread position:
               
231-554
               

               
Cow position:
               
chr19:3222831-3222504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
151, 28
               

               
Conread position:
               
237-553
               

               
Cow position:
               
chr19:7066189-7065898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
263, 14
               

               
Conread position:
               
237-553
               

               
Cow position:
               
chr19:20693520-20693201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 20
               

               
Conread position:
               
239-555
               

               
Cow position:
               
chr19:46918873-46918541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 59
               

               
Conread position:
               
253-534
               

               
Cow position:
               
chr19:36176756-36176470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 60
               

               
Conread position:
               
253-555
               

               
Cow position:
               
chr19:47727566-47727868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 111
               

               
Conread position:
               
258-492
               

               
Cow position:
               
chr19:6949907-6949684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
92, 41
               

               
Conread position:
               
258-518
               

               
Cow position:
               
chr19:10286898-10286647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
238, 65
               

               
Conread position:
               
258-540
               

               
Cow position:
               
chr19:8839609-8839321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
258-546
               

               
Cow position:
               
chr19:33932146-33932429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
92, 37
               

               
Conread position:
               
258-555
               

               
Cow position:
               
chr19:53645423-53645714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
124, 52
               

               
Conread position:
               
264-555
               

               
Cow position:
               
chr19:37502683-37502956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
31, 53
               

               
Conread position:
               
298-555
               

               
Cow position:
               
chr19:46180852-46181112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
52, 24
               

               
Conread position:
               
303-555
               

               
Cow position:
               
chr19:25696251-25696505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
133, 11
               

               
Conread position:
               
326-486
               

               
Cow position:
               
chr19:52136756-52136921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
328-555
               

               
Cow position:
               
chr19:7612555-7612329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
22, 98
               

               
Conread position:
               
330-537
               

               
Cow position:
               
chr19:55210534-55210736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
22, 102
               

               
Conread position:
               
351-529
               

               
Cow position:
               
chr19:33882250-33882428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.