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Cow genome map

           
Conread name:
           
rpro40_a11.y1
        

               
Conread position:
               
12-555
               

               
Cow position:
               
chr21:12154440-12153908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
167, 15
               

               
Conread position:
               
42-232
               

               
Cow position:
               
chr21:16119873-16120061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
29, 58
               

               
Conread position:
               
42-295
               

               
Cow position:
               
chr21:31279538-31279296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
42-304
               

               
Cow position:
               
chr21:8648563-8648294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
107, 208
               

               
Conread position:
               
42-505
               

               
Cow position:
               
chr21:32339463-32339905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
307, 20
               

               
Conread position:
               
42-528
               

               
Cow position:
               
chr21:23568513-23568013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
24, 100
               

               
Conread position:
               
43-385
               

               
Cow position:
               
chr21:41140432-41140766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
307, 12
               

               
Conread position:
               
43-463
               

               
Cow position:
               
chr21:47332-46911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
89, 124
               

               
Conread position:
               
44-537
               

               
Cow position:
               
chr21:6051787-6051302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 18
               

               
Conread position:
               
45-238
               

               
Cow position:
               
chr21:44732760-44732949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
45-537
               

               
Cow position:
               
chr21:41621409-41620915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 24
               

               
Conread position:
               
47-206
               

               
Cow position:
               
chr21:13488836-13488678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
47-255
               

               
Cow position:
               
chr21:745452-745252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
18, 94
               

               
Conread position:
               
47-257
               

               
Cow position:
               
chr21:8509157-8509359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
47-472
               

               
Cow position:
               
chr21:29978486-29978899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
303, 20
               

               
Conread position:
               
47-494
               

               
Cow position:
               
chr21:41590283-41590715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 104
               

               
Conread position:
               
48-240
               

               
Cow position:
               
chr21:41956921-41957119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
81, 163
               

               
Conread position:
               
48-293
               

               
Cow position:
               
chr21:13580695-13580455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
12, 29
               

               
Conread position:
               
48-337
               

               
Cow position:
               
chr21:71868-71585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 104
               

               
Conread position:
               
48-389
               

               
Cow position:
               
chr21:8426721-8426388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 20
               

               
Conread position:
               
48-429
               

               
Cow position:
               
chr21:45906339-45906714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 105
               

               
Conread position:
               
49-337
               

               
Cow position:
               
chr21:30980277-30980578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
15, 199
               

               
Conread position:
               
49-425
               

               
Cow position:
               
chr21:22209964-22210333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
301, 94
               

               
Conread position:
               
50-207
               

               
Cow position:
               
chr21:42341664-42341813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
50-553
               

               
Cow position:
               
chr21:11739839-11740355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 73
               

               
Conread position:
               
51-219
               

               
Cow position:
               
chr21:9382582-9382757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
51-297
               

               
Cow position:
               
chr21:29658550-29658314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
51-300
               

               
Cow position:
               
chr21:42145095-42144861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
51-363
               

               
Cow position:
               
chr21:43388637-43388324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
156, 25
               

               
Conread position:
               
51-493
               

               
Cow position:
               
chr21:28244744-28244318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
299, 88
               

               
Conread position:
               
51-521
               

               
Cow position:
               
chr21:47464846-47465309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
251, 14
               

               
Conread position:
               
51-527
               

               
Cow position:
               
chr21:42841311-42841785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 12
               

               
Conread position:
               
51-554
               

               
Cow position:
               
chr21:20262069-20262558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 49
               

               
Conread position:
               
51-555
               

               
Cow position:
               
chr21:10070647-10071154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
98, 19
               

               
Conread position:
               
51-555
               

               
Cow position:
               
chr21:19195879-19196393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 137
               

               
Conread position:
               
51-555
               

               
Cow position:
               
chr21:38918478-38917993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 25
               

               
Conread position:
               
52-207
               

               
Cow position:
               
chr21:37479315-37479468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
52-217
               

               
Cow position:
               
chr21:5789635-5789477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
9, 106
               

               
Conread position:
               
52-231
               

               
Cow position:
               
chr21:45376223-45376049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
52-232
               

               
Cow position:
               
chr21:45537467-45537284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
18, 114
               

               
Conread position:
               
52-238
               

               
Cow position:
               
chr21:6292023-6291840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
121, 16
               

               
Conread position:
               
52-245
               

               
Cow position:
               
chr21:16797126-16796939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
99, 16
               

               
Conread position:
               
52-273
               

               
Cow position:
               
chr21:20174590-20174380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
12, 76
               

               
Conread position:
               
52-293
               

               
Cow position:
               
chr21:31652662-31652430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
96, 24
               

               
Conread position:
               
52-295
               

               
Cow position:
               
chr21:44724098-44724328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
12, 90
               

               
Conread position:
               
52-302
               

               
Cow position:
               
chr21:41610457-41610200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
12, 119
               

               
Conread position:
               
52-303
               

               
Cow position:
               
chr21:17403571-17403818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
36, 18
               

               
Conread position:
               
52-305
               

               
Cow position:
               
chr21:19703004-19702761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
196, 10
               

               
Conread position:
               
52-305
               

               
Cow position:
               
chr21:46451694-46451922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
17, 68
               

               
Conread position:
               
52-306
               

               
Cow position:
               
chr21:27677758-27677511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
142, 24
               

               
Conread position:
               
52-326
               

               
Cow position:
               
chr21:36682604-36682332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
15, 53
               

               
Conread position:
               
52-358
               

               
Cow position:
               
chr21:12354427-12354715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
46, 16
               

               
Conread position:
               
52-362
               

               
Cow position:
               
chr21:38720525-38720226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
97, 63
               

               
Conread position:
               
52-376
               

               
Cow position:
               
chr21:45835115-45835442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
149, 18
               

               
Conread position:
               
52-378
               

               
Cow position:
               
chr21:868644-868967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
89, 11
               

               
Conread position:
               
52-381
               

               
Cow position:
               
chr21:47713731-47714048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
100, 80
               

               
Conread position:
               
52-389
               

               
Cow position:
               
chr21:13656356-13656682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
14, 109
               

               
Conread position:
               
52-428
               

               
Cow position:
               
chr21:30835642-30835270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
242, 111
               

               
Conread position:
               
52-446
               

               
Cow position:
               
chr21:23979903-23980292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
127, 110
               

               
Conread position:
               
52-476
               

               
Cow position:
               
chr21:48233901-48234299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 18
               

               
Conread position:
               
52-483
               

               
Cow position:
               
chr21:30222618-30222196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
297, 80
               

               
Conread position:
               
52-553
               

               
Cow position:
               
chr21:6713248-6713761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 99
               

               
Conread position:
               
52-555
               

               
Cow position:
               
chr21:82336-81845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 60
               

               
Conread position:
               
52-555
               

               
Cow position:
               
chr21:22718504-22719005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 68
               

               
Conread position:
               
52-555
               

               
Cow position:
               
chr21:23673018-23672521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
297, 15
               

               
Conread position:
               
52-555
               

               
Cow position:
               
chr21:34010119-34010615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 75
               

               
Conread position:
               
53-329
               

               
Cow position:
               
chr21:36508504-36508249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
53-537
               

               
Cow position:
               
chr21:23587149-23586674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 75
               

               
Conread position:
               
53-538
               

               
Cow position:
               
chr21:24296489-24296968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 111
               

               
Conread position:
               
53-555
               

               
Cow position:
               
chr21:33982539-33983035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 79
               

               
Conread position:
               
54-286
               

               
Cow position:
               
chr21:30938393-30938623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
75, 22
               

               
Conread position:
               
54-304
               

               
Cow position:
               
chr21:12310748-12310508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
16, 68
               

               
Conread position:
               
54-311
               

               
Cow position:
               
chr21:19561291-19561543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
137, 20
               

               
Conread position:
               
54-538
               

               
Cow position:
               
chr21:23535987-23535508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 130
               

               
Conread position:
               
55-257
               

               
Cow position:
               
chr21:8506277-8506471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
55-263
               

               
Cow position:
               
chr21:5214624-5214420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
94, 18
               

               
Conread position:
               
55-301
               

               
Cow position:
               
chr21:6851437-6851206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
55-301
               

               
Cow position:
               
chr21:8545747-8545984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
118, 108
               

               
Conread position:
               
55-318
               

               
Cow position:
               
chr21:16794069-16793808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
11, 126
               

               
Conread position:
               
55-389
               

               
Cow position:
               
chr21:18059687-18060009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
94, 21
               

               
Conread position:
               
55-442
               

               
Cow position:
               
chr21:16915056-16914669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
11, 115
               

               
Conread position:
               
55-448
               

               
Cow position:
               
chr21:27810665-27810297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
94, 175
               

               
Conread position:
               
55-456
               

               
Cow position:
               
chr21:16152713-16152310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
193, 101
               

               
Conread position:
               
55-465
               

               
Cow position:
               
chr21:12461695-12462100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 89
               

               
Conread position:
               
55-481
               

               
Cow position:
               
chr21:957942-957521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
286, 102
               

               
Conread position:
               
55-534
               

               
Cow position:
               
chr21:9311330-9310842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
12, 130
               

               
Conread position:
               
55-535
               

               
Cow position:
               
chr21:34654345-34653882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 87
               

               
Conread position:
               
55-536
               

               
Cow position:
               
chr21:29001874-29002365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 21
               

               
Conread position:
               
55-538
               

               
Cow position:
               
chr21:30592041-30592503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
247, 74
               

               
Conread position:
               
55-553
               

               
Cow position:
               
chr21:13584779-13585279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 190
               

               
Conread position:
               
55-554
               

               
Cow position:
               
chr21:27229531-27230016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 15
               

               
Conread position:
               
55-554
               

               
Cow position:
               
chr21:44825600-44826100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 64
               

               
Conread position:
               
55-555
               

               
Cow position:
               
chr21:5650174-5649681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
9, 129
               

               
Conread position:
               
55-555
               

               
Cow position:
               
chr21:27863246-27863744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
240, 83
               

               
Conread position:
               
55-555
               

               
Cow position:
               
chr21:32297234-32297727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 195
               

               
Conread position:
               
55-555
               

               
Cow position:
               
chr21:42501325-42500806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 104
               

               
Conread position:
               
56-180
               

               
Cow position:
               
chr21:20166053-20165932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
56-217
               

               
Cow position:
               
chr21:17857036-17856880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
56-240
               

               
Cow position:
               
chr21:11678050-11678220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
56-282
               

               
Cow position:
               
chr21:25012348-25012135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
56-295
               

               
Cow position:
               
chr21:26018653-26018419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
56-380
               

               
Cow position:
               
chr21:28919260-28919568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
294, 20
               

               
Conread position:
               
56-380
               

               
Cow position:
               
chr21:40266396-40266080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
114, 92
               

               
Conread position:
               
56-412
               

               
Cow position:
               
chr21:16570160-16569825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
270, 14
               

               
Conread position:
               
56-428
               

               
Cow position:
               
chr21:6998213-6997846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
199, 72
               

               
Conread position:
               
56-476
               

               
Cow position:
               
chr21:17638167-17637758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
294, 125
               

               
Conread position:
               
56-505
               

               
Cow position:
               
chr21:27145713-27146160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
41, 145
               

               
Conread position:
               
56-529
               

               
Cow position:
               
chr21:5238660-5238199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
138, 64
               

               
Conread position:
               
56-555
               

               
Cow position:
               
chr21:4400065-4399575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
285, 69
               

               
Conread position:
               
56-555
               

               
Cow position:
               
chr21:24858587-24858086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
234, 14
               

               
Conread position:
               
57-255
               

               
Cow position:
               
chr21:11779267-11779464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
153, 0
               

               
Conread position:
               
57-296
               

               
Cow position:
               
chr21:41043046-41043279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
57-304
               

               
Cow position:
               
chr21:36022916-36023158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
57-309
               

               
Cow position:
               
chr21:20163979-20163734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
27, 53
               

               
Conread position:
               
57-322
               

               
Cow position:
               
chr21:10130418-10130157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
244, 124
               

               
Conread position:
               
57-365
               

               
Cow position:
               
chr21:20165910-20165612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
293, 27
               

               
Conread position:
               
57-503
               

               
Cow position:
               
chr21:13840599-13840155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
293, 120
               

               
Conread position:
               
57-505
               

               
Cow position:
               
chr21:17184190-17183754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 72
               

               
Conread position:
               
57-540
               

               
Cow position:
               
chr21:27521071-27521530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
293, 27
               

               
Conread position:
               
57-555
               

               
Cow position:
               
chr21:45970908-45971383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
284, 84
               

               
Conread position:
               
58-236
               

               
Cow position:
               
chr21:48334515-48334696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
62, 98
               

               
Conread position:
               
58-266
               

               
Cow position:
               
chr21:13883747-13883550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
140, 39
               

               
Conread position:
               
58-299
               

               
Cow position:
               
chr21:39394018-39393784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
31, 18
               

               
Conread position:
               
58-337
               

               
Cow position:
               
chr21:47383279-47383562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
177, 65
               

               
Conread position:
               
58-379
               

               
Cow position:
               
chr21:742546-742245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
9, 95
               

               
Conread position:
               
58-521
               

               
Cow position:
               
chr21:40589210-40589671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
283, 85
               

               
Conread position:
               
58-538
               

               
Cow position:
               
chr21:19958485-19958021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
127, 21
               

               
Conread position:
               
58-554
               

               
Cow position:
               
chr21:641854-641360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
291, 87
               

               
Conread position:
               
58-555
               

               
Cow position:
               
chr21:643590-643112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
292, 38
               

               
Conread position:
               
58-555
               

               
Cow position:
               
chr21:49699768-49700261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
324, 20
               

               
Conread position:
               
59-239
               

               
Cow position:
               
chr21:48482261-48482437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
59-281
               

               
Cow position:
               
chr21:15012702-15012493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
8, 39
               

               
Conread position:
               
59-282
               

               
Cow position:
               
chr21:11182818-11182606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
187, 53
               

               
Conread position:
               
59-433
               

               
Cow position:
               
chr21:33580679-33580315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
146, 19
               

               
Conread position:
               
59-505
               

               
Cow position:
               
chr21:9301493-9301038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
135, 17
               

               
Conread position:
               
59-537
               

               
Cow position:
               
chr21:19083317-19083804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 20
               

               
Conread position:
               
59-555
               

               
Cow position:
               
chr21:6834318-6833827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
282, 17
               

               
Conread position:
               
59-555
               

               
Cow position:
               
chr21:18568369-18568873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
289, 13
               

               
Conread position:
               
59-555
               

               
Cow position:
               
chr21:41156139-41155637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 17
               

               
Conread position:
               
60-229
               

               
Cow position:
               
chr21:43655970-43655805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
60-233
               

               
Cow position:
               
chr21:3379485-3379653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
50, 81
               

               
Conread position:
               
60-555
               

               
Cow position:
               
chr21:37480232-37479734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 91
               

               
Conread position:
               
61-230
               

               
Cow position:
               
chr21:36398304-36398461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
61-283
               

               
Cow position:
               
chr21:40820584-40820801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
61-312
               

               
Cow position:
               
chr21:42328395-42328643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
70, 9
               

               
Conread position:
               
61-443
               

               
Cow position:
               
chr21:12916152-12916533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
104, 13
               

               
Conread position:
               
61-540
               

               
Cow position:
               
chr21:27568891-27569365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 179
               

               
Conread position:
               
61-555
               

               
Cow position:
               
chr21:29069056-29069553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 101
               

               
Conread position:
               
62-245
               

               
Cow position:
               
chr21:27744295-27744113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
82, 102
               

               
Conread position:
               
62-308
               

               
Cow position:
               
chr21:22851181-22850949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
62-389
               

               
Cow position:
               
chr21:22014457-22014134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 30
               

               
Conread position:
               
62-555
               

               
Cow position:
               
chr21:5970580-5971061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
132, 69
               

               
Conread position:
               
63-232
               

               
Cow position:
               
chr21:6042054-6041884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
63-235
               

               
Cow position:
               
chr21:39845867-39845690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
63-246
               

               
Cow position:
               
chr21:29418838-29418654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
18, 102
               

               
Conread position:
               
63-263
               

               
Cow position:
               
chr21:12349033-12348837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
136, 100
               

               
Conread position:
               
63-264
               

               
Cow position:
               
chr21:8986291-8986091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
86, 102
               

               
Conread position:
               
63-284
               

               
Cow position:
               
chr21:25014775-25014975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
63-311
               

               
Cow position:
               
chr21:21616041-21615807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
63-312
               

               
Cow position:
               
chr21:17252712-17252955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
63-380
               

               
Cow position:
               
chr21:47363459-47363782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
71, 56
               

               
Conread position:
               
63-471
               

               
Cow position:
               
chr21:20260032-20260456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 196
               

               
Conread position:
               
63-526
               

               
Cow position:
               
chr21:38449187-38449645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
287, 82
               

               
Conread position:
               
63-536
               

               
Cow position:
               
chr21:14464851-14464374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 100
               

               
Conread position:
               
63-538
               

               
Cow position:
               
chr21:29213894-29214361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 20
               

               
Conread position:
               
63-551
               

               
Cow position:
               
chr21:5898144-5898619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
287, 20
               

               
Conread position:
               
63-555
               

               
Cow position:
               
chr21:39888461-39888969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 178
               

               
Conread position:
               
63-555
               

               
Cow position:
               
chr21:46264456-46263952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 205
               

               
Conread position:
               
64-349
               

               
Cow position:
               
chr21:7169951-7169675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
64-482
               

               
Cow position:
               
chr21:10004619-10005032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 83
               

               
Conread position:
               
64-553
               

               
Cow position:
               
chr21:39403264-39403761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 84
               

               
Conread position:
               
64-553
               

               
Cow position:
               
chr21:46848869-46849346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 67
               

               
Conread position:
               
64-555
               

               
Cow position:
               
chr21:4281619-4282088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
286, 76
               

               
Conread position:
               
64-555
               

               
Cow position:
               
chr21:7673376-7672908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 12
               

               
Conread position:
               
64-555
               

               
Cow position:
               
chr21:36763326-36762828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
140, 82
               

               
Conread position:
               
65-300
               

               
Cow position:
               
chr21:16498778-16498554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
65-306
               

               
Cow position:
               
chr21:9417881-9418126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
58, 179
               

               
Conread position:
               
65-331
               

               
Cow position:
               
chr21:12104616-12104370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
65-389
               

               
Cow position:
               
chr21:17890566-17890250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
285, 94
               

               
Conread position:
               
65-463
               

               
Cow position:
               
chr21:20153220-20152820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 99
               

               
Conread position:
               
65-472
               

               
Cow position:
               
chr21:17874927-17875332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
68, 60
               

               
Conread position:
               
65-514
               

               
Cow position:
               
chr21:802060-802475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 68
               

               
Conread position:
               
65-524
               

               
Cow position:
               
chr21:32559108-32559545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 80
               

               
Conread position:
               
65-555
               

               
Cow position:
               
chr21:37299723-37299240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
238, 32
               

               
Conread position:
               
66-364
               

               
Cow position:
               
chr21:28030541-28030260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
284, 36
               

               
Conread position:
               
66-365
               

               
Cow position:
               
chr21:14126534-14126259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
66-380
               

               
Cow position:
               
chr21:13842755-13842444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
83, 118
               

               
Conread position:
               
68-185
               

               
Cow position:
               
chr21:10014066-10014184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
68-185
               

               
Cow position:
               
chr21:29715244-29715358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
68-245
               

               
Cow position:
               
chr21:37495684-37495859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
152, 60
               

               
Conread position:
               
68-254
               

               
Cow position:
               
chr21:36121489-36121305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
68-337
               

               
Cow position:
               
chr21:46599618-46599359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
233, 83
               

               
Conread position:
               
68-432
               

               
Cow position:
               
chr21:22121762-22121426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
282, 64
               

               
Conread position:
               
68-497
               

               
Cow position:
               
chr21:10114072-10114490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
11, 100
               

               
Conread position:
               
68-536
               

               
Cow position:
               
chr21:24598903-24598456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 28
               

               
Conread position:
               
68-539
               

               
Cow position:
               
chr21:30848688-30849147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
207, 76
               

               
Conread position:
               
68-555
               

               
Cow position:
               
chr21:19615436-19614948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
11, 43
               

               
Conread position:
               
68-555
               

               
Cow position:
               
chr21:23822412-23821943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 115
               

               
Conread position:
               
68-555
               

               
Cow position:
               
chr21:41974107-41974604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 103
               

               
Conread position:
               
69-236
               

               
Cow position:
               
chr21:31462816-31462658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
69-246
               

               
Cow position:
               
chr21:11353323-11353146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
17, 95
               

               
Conread position:
               
69-257
               

               
Cow position:
               
chr21:7460864-7460683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
139, 71
               

               
Conread position:
               
69-296
               

               
Cow position:
               
chr21:24875611-24875391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
69-302
               

               
Cow position:
               
chr21:24797914-24797691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
185, 90
               

               
Conread position:
               
69-311
               

               
Cow position:
               
chr21:28907290-28907519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
136, 55
               

               
Conread position:
               
69-326
               

               
Cow position:
               
chr21:19868703-19868946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
185, 72
               

               
Conread position:
               
69-389
               

               
Cow position:
               
chr21:8349581-8349275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
185, 30
               

               
Conread position:
               
69-410
               

               
Cow position:
               
chr21:47719046-47719373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
224, 12
               

               
Conread position:
               
69-529
               

               
Cow position:
               
chr21:42135360-42135820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 76
               

               
Conread position:
               
70-263
               

               
Cow position:
               
chr21:18783208-18783397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
110, 62
               

               
Conread position:
               
72-552
               

               
Cow position:
               
chr21:11644710-11645189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 79
               

               
Conread position:
               
73-318
               

               
Cow position:
               
chr21:41287541-41287775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
75-525
               

               
Cow position:
               
chr21:17193495-17193952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 84
               

               
Conread position:
               
76-527
               

               
Cow position:
               
chr21:31253786-31253341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
7, 75
               

               
Conread position:
               
78-239
               

               
Cow position:
               
chr21:40930226-40930382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
78-279
               

               
Cow position:
               
chr21:19161965-19161768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
116, 105
               

               
Conread position:
               
78-284
               

               
Cow position:
               
chr21:14360618-14360416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
78-305
               

               
Cow position:
               
chr21:46809514-46809741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
179, 42
               

               
Conread position:
               
78-307
               

               
Cow position:
               
chr21:24266311-24266537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
71, 86
               

               
Conread position:
               
78-337
               

               
Cow position:
               
chr21:19240628-19240877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
225, 37
               

               
Conread position:
               
78-381
               

               
Cow position:
               
chr21:41522163-41522452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
67, 19
               

               
Conread position:
               
78-425
               

               
Cow position:
               
chr21:28237449-28237803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
71, 91
               

               
Conread position:
               
78-554
               

               
Cow position:
               
chr21:14760807-14760360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
304, 32
               

               
Conread position:
               
78-555
               

               
Cow position:
               
chr21:8351044-8351526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 73
               

               
Conread position:
               
79-283
               

               
Cow position:
               
chr21:2536887-2537087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
70, 84
               

               
Conread position:
               
79-453
               

               
Cow position:
               
chr21:10561336-10561697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
207, 78
               

               
Conread position:
               
79-505
               

               
Cow position:
               
chr21:21169248-21169663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
271, 28
               

               
Conread position:
               
79-527
               

               
Cow position:
               
chr21:22861241-22860808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 54
               

               
Conread position:
               
80-555
               

               
Cow position:
               
chr21:31691720-31691256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
223, 19
               

               
Conread position:
               
85-389
               

               
Cow position:
               
chr21:828967-829255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 66
               

               
Conread position:
               
92-554
               

               
Cow position:
               
chr21:6624395-6623920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
249, 67
               

               
Conread position:
               
94-337
               

               
Cow position:
               
chr21:28600118-28599889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
23, 65
               

               
Conread position:
               
97-493
               

               
Cow position:
               
chr21:18800296-18800686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 205
               

               
Conread position:
               
97-536
               

               
Cow position:
               
chr21:48107648-48108070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
253, 59
               

               
Conread position:
               
103-287
               

               
Cow position:
               
chr21:30243460-30243633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
103-479
               

               
Cow position:
               
chr21:42007234-42007603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
247, 60
               

               
Conread position:
               
103-538
               

               
Cow position:
               
chr21:19259041-19258621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
291, 47
               

               
Conread position:
               
110-536
               

               
Cow position:
               
chr21:41579973-41579548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
24, 10
               

               
Conread position:
               
120-555
               

               
Cow position:
               
chr21:33350956-33350520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 134
               

               
Conread position:
               
124-527
               

               
Cow position:
               
chr21:12617371-12616945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 329
               

               
Conread position:
               
124-536
               

               
Cow position:
               
chr21:18779771-18780173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
224, 20
               

               
Conread position:
               
124-555
               

               
Cow position:
               
chr21:23321875-23322306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
260, 33
               

               
Conread position:
               
130-555
               

               
Cow position:
               
chr21:33264041-33263626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 15
               

               
Conread position:
               
131-523
               

               
Cow position:
               
chr21:13365540-13365151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 15
               

               
Conread position:
               
132-292
               

               
Cow position:
               
chr21:5341898-5342051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
132-336
               

               
Cow position:
               
chr21:19359977-19360175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
171, 30
               

               
Conread position:
               
132-522
               

               
Cow position:
               
chr21:26245113-26244744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
218, 31
               

               
Conread position:
               
132-533
               

               
Cow position:
               
chr21:36795804-36795402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 33
               

               
Conread position:
               
132-551
               

               
Cow position:
               
chr21:36297689-36297258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 26
               

               
Conread position:
               
132-555
               

               
Cow position:
               
chr21:42384708-42384283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 32
               

               
Conread position:
               
133-555
               

               
Cow position:
               
chr21:42413900-42414324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 28
               

               
Conread position:
               
134-540
               

               
Cow position:
               
chr21:29485175-29484777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 28
               

               
Conread position:
               
134-552
               

               
Cow position:
               
chr21:3818401-3817998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
216, 23
               

               
Conread position:
               
135-555
               

               
Cow position:
               
chr21:396063-395653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 28
               

               
Conread position:
               
137-336
               

               
Cow position:
               
chr21:9027509-9027313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
155, 25
               

               
Conread position:
               
137-341
               

               
Cow position:
               
chr21:41047001-41046800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
166, 103
               

               
Conread position:
               
141-529
               

               
Cow position:
               
chr21:35569174-35569580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 21
               

               
Conread position:
               
145-331
               

               
Cow position:
               
chr21:7268696-7268877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
109, 89
               

               
Conread position:
               
146-555
               

               
Cow position:
               
chr21:25764820-25764410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 16
               

               
Conread position:
               
149-410
               

               
Cow position:
               
chr21:45262627-45262886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 103
               

               
Conread position:
               
150-537
               

               
Cow position:
               
chr21:1059256-1058873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
200, 14
               

               
Conread position:
               
151-438
               

               
Cow position:
               
chr21:22465370-22465095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
197, 11
               

               
Conread position:
               
151-494
               

               
Cow position:
               
chr21:7581725-7582068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
180, 11
               

               
Conread position:
               
151-536
               

               
Cow position:
               
chr21:18828124-18828512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 22
               

               
Conread position:
               
151-554
               

               
Cow position:
               
chr21:28626417-28626017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 13
               

               
Conread position:
               
153-536
               

               
Cow position:
               
chr21:45356011-45355633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
197, 10
               

               
Conread position:
               
159-389
               

               
Cow position:
               
chr21:297927-297700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
191, 91
               

               
Conread position:
               
162-480
               

               
Cow position:
               
chr21:35354703-35354393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
38, 91
               

               
Conread position:
               
162-509
               

               
Cow position:
               
chr21:28211361-28211024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
188, 46
               

               
Conread position:
               
162-515
               

               
Cow position:
               
chr21:15911570-15911218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
134, 72
               

               
Conread position:
               
162-517
               

               
Cow position:
               
chr21:28191202-28190844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 78
               

               
Conread position:
               
162-555
               

               
Cow position:
               
chr21:38121271-38120878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
337, 89
               

               
Conread position:
               
163-412
               

               
Cow position:
               
chr21:44214295-44214048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
139, 69
               

               
Conread position:
               
163-472
               

               
Cow position:
               
chr21:12723320-12723020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
107, 66
               

               
Conread position:
               
164-354
               

               
Cow position:
               
chr21:47160386-47160199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
92, 78
               

               
Conread position:
               
164-536
               

               
Cow position:
               
chr21:12801579-12801947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 89
               

               
Conread position:
               
164-538
               

               
Cow position:
               
chr21:8125637-8126001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
217, 76
               

               
Conread position:
               
164-538
               

               
Cow position:
               
chr21:28442900-28442541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
261, 87
               

               
Conread position:
               
164-555
               

               
Cow position:
               
chr21:30990119-30990493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
335, 67
               

               
Conread position:
               
167-555
               

               
Cow position:
               
chr21:5392370-5392763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 46
               

               
Conread position:
               
167-555
               

               
Cow position:
               
chr21:33210353-33209974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 84
               

               
Conread position:
               
168-492
               

               
Cow position:
               
chr21:45920894-45921215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
182, 72
               

               
Conread position:
               
170-337
               

               
Cow position:
               
chr21:20183233-20183071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
171-442
               

               
Cow position:
               
chr21:20418521-20418791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
179, 70
               

               
Conread position:
               
174-416
               

               
Cow position:
               
chr21:35899999-35899764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
40, 67
               

               
Conread position:
               
176-529
               

               
Cow position:
               
chr21:18844856-18845211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
131, 81
               

               
Conread position:
               
176-536
               

               
Cow position:
               
chr21:18850068-18850423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 36
               

               
Conread position:
               
181-554
               

               
Cow position:
               
chr21:16187656-16188020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 70
               

               
Conread position:
               
182-555
               

               
Cow position:
               
chr21:42540072-42540445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
241, 75
               

               
Conread position:
               
189-520
               

               
Cow position:
               
chr21:15611283-15610967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
127, 52
               

               
Conread position:
               
190-525
               

               
Cow position:
               
chr21:33727317-33727653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
30, 50
               

               
Conread position:
               
190-528
               

               
Cow position:
               
chr21:25383168-25382814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
120, 49
               

               
Conread position:
               
190-536
               

               
Cow position:
               
chr21:30606944-30607288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
26, 52
               

               
Conread position:
               
190-545
               

               
Cow position:
               
chr21:41878611-41878266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
160, 16
               

               
Conread position:
               
190-555
               

               
Cow position:
               
chr21:10514949-10514587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
151, 59
               

               
Conread position:
               
193-526
               

               
Cow position:
               
chr21:13738692-13738378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
243, 41
               

               
Conread position:
               
199-473
               

               
Cow position:
               
chr21:11360168-11359900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
151, 10
               

               
Conread position:
               
199-525
               

               
Cow position:
               
chr21:10601242-10601560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 42
               

               
Conread position:
               
199-534
               

               
Cow position:
               
chr21:44515397-44515073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 52
               

               
Conread position:
               
199-555
               

               
Cow position:
               
chr21:724752-725115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 38
               

               
Conread position:
               
199-555
               

               
Cow position:
               
chr21:39401723-39401375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
87, 15
               

               
Conread position:
               
200-516
               

               
Cow position:
               
chr21:46144091-46143760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
150, 51
               

               
Conread position:
               
202-515
               

               
Cow position:
               
chr21:13488657-13488337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 55
               

               
Conread position:
               
204-505
               

               
Cow position:
               
chr21:19363332-19363632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 6
               

               
Conread position:
               
204-555
               

               
Cow position:
               
chr21:28882269-28881924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
50, 9
               

               
Conread position:
               
205-555
               

               
Cow position:
               
chr21:24131196-24130856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
92, 34
               

               
Conread position:
               
211-538
               

               
Cow position:
               
chr21:5636599-5636926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
139, 78
               

               
Conread position:
               
211-555
               

               
Cow position:
               
chr21:2367453-2367115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
139, 40
               

               
Conread position:
               
213-555
               

               
Cow position:
               
chr21:23149902-23150244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 29
               

               
Conread position:
               
215-555
               

               
Cow position:
               
chr21:23192392-23192743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 27
               

               
Conread position:
               
220-482
               

               
Cow position:
               
chr21:18041735-18041989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 22
               

               
Conread position:
               
220-512
               

               
Cow position:
               
chr21:19936808-19937108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
66, 39
               

               
Conread position:
               
221-553
               

               
Cow position:
               
chr21:2679668-2679332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 21
               

               
Conread position:
               
226-555
               

               
Cow position:
               
chr21:2904372-2904687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
28, 16
               

               
Conread position:
               
232-540
               

               
Cow position:
               
chr21:12960794-12961106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 9
               

               
Conread position:
               
241-525
               

               
Cow position:
               
chr21:28443281-28443571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
71, 25
               

               
Conread position:
               
253-529
               

               
Cow position:
               
chr21:21077408-21077133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
97, 46
               

               
Conread position:
               
253-555
               

               
Cow position:
               
chr21:16612707-16612404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 46
               

               
Conread position:
               
257-521
               

               
Cow position:
               
chr21:6102183-6102457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
92, 33
               

               
Conread position:
               
258-540
               

               
Cow position:
               
chr21:2785699-2785985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
92, 57
               

               
Conread position:
               
258-552
               

               
Cow position:
               
chr21:36793972-36793660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
61, 77
               

               
Conread position:
               
274-555
               

               
Cow position:
               
chr21:18495031-18494750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
76, 41
               

               
Conread position:
               
288-514
               

               
Cow position:
               
chr21:42024169-42023943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
62, 26
               

               
Conread position:
               
325-555
               

               
Cow position:
               
chr21:23683560-23683325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
25, 108
               

               
Conread position:
               
348-539
               

               
Cow position:
               
chr21:21223281-21223084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
394-555
               

               
Cow position:
               
chr21:28919680-28919848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
51, 86
               
Show alignments to all cow chromosomes.