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Cow genome map

           
Conread name:
           
rpro40_a11.y1
        

               
Conread position:
               
23-239
               

               
Cow position:
               
chr22:33031047-33030824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
43, 19
               

               
Conread position:
               
24-137
               

               
Cow position:
               
chr22:10690977-10690868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
24-526
               

               
Cow position:
               
chr22:40349577-40349094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
324, 39
               

               
Conread position:
               
36-185
               

               
Cow position:
               
chr22:21964045-21963896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
113, 16
               

               
Conread position:
               
39-555
               

               
Cow position:
               
chr22:10303238-10302719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 64
               

               
Conread position:
               
43-502
               

               
Cow position:
               
chr22:7082246-7081793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
55, 12
               

               
Conread position:
               
43-546
               

               
Cow position:
               
chr22:4060730-4061219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 106
               

               
Conread position:
               
44-534
               

               
Cow position:
               
chr22:25742749-25743221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
259, 52
               

               
Conread position:
               
44-555
               

               
Cow position:
               
chr22:41970939-41971445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 56
               

               
Conread position:
               
46-247
               

               
Cow position:
               
chr22:17746032-17745831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
68, 16
               

               
Conread position:
               
46-554
               

               
Cow position:
               
chr22:17949763-17950246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 26
               

               
Conread position:
               
47-218
               

               
Cow position:
               
chr22:26775717-26775547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
102, 5
               

               
Conread position:
               
47-273
               

               
Cow position:
               
chr22:8327956-8327741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
19, 76
               

               
Conread position:
               
47-311
               

               
Cow position:
               
chr22:7496892-7497152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
12, 31
               

               
Conread position:
               
47-505
               

               
Cow position:
               
chr22:16533286-16532845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
303, 50
               

               
Conread position:
               
47-528
               

               
Cow position:
               
chr22:41982512-41982977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
452, 15
               

               
Conread position:
               
47-555
               

               
Cow position:
               
chr22:17152902-17152387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 211
               

               
Conread position:
               
48-303
               

               
Cow position:
               
chr22:42230308-42230555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
148, 92
               

               
Conread position:
               
48-362
               

               
Cow position:
               
chr22:24903808-24903496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 105
               

               
Conread position:
               
48-528
               

               
Cow position:
               
chr22:6709577-6710037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 121
               

               
Conread position:
               
49-271
               

               
Cow position:
               
chr22:8571132-8570903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
41, 172
               

               
Conread position:
               
49-307
               

               
Cow position:
               
chr22:14141132-14141381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
49-528
               

               
Cow position:
               
chr22:24066032-24066497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
246, 37
               

               
Conread position:
               
49-529
               

               
Cow position:
               
chr22:5595594-5596052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
10, 116
               

               
Conread position:
               
50-295
               

               
Cow position:
               
chr22:14600121-14600361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
15, 114
               

               
Conread position:
               
50-297
               

               
Cow position:
               
chr22:43965913-43965667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
216, 20
               

               
Conread position:
               
50-337
               

               
Cow position:
               
chr22:2109421-2109690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
50-430
               

               
Cow position:
               
chr22:33399276-33399642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
15, 103
               

               
Conread position:
               
50-514
               

               
Cow position:
               
chr22:25221692-25222149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
258, 90
               

               
Conread position:
               
50-539
               

               
Cow position:
               
chr22:23979999-23980492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
144, 5
               

               
Conread position:
               
50-554
               

               
Cow position:
               
chr22:34616527-34616021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
9, 196
               

               
Conread position:
               
50-555
               

               
Cow position:
               
chr22:8732355-8732853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 12
               

               
Conread position:
               
50-555
               

               
Cow position:
               
chr22:18926566-18926062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 5
               

               
Conread position:
               
50-555
               

               
Cow position:
               
chr22:21012598-21012101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 54
               

               
Conread position:
               
51-285
               

               
Cow position:
               
chr22:1065316-1065088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
51-285
               

               
Cow position:
               
chr22:4736235-4736006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
121, 25
               

               
Conread position:
               
51-301
               

               
Cow position:
               
chr22:8357786-8357551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
51-301
               

               
Cow position:
               
chr22:26112578-26112333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
19, 117
               

               
Conread position:
               
51-308
               

               
Cow position:
               
chr22:3937270-3937014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
143, 19
               

               
Conread position:
               
51-316
               

               
Cow position:
               
chr22:33985593-33985848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
13, 100
               

               
Conread position:
               
51-389
               

               
Cow position:
               
chr22:43237191-43237527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
37, 103
               

               
Conread position:
               
51-412
               

               
Cow position:
               
chr22:11766839-11767193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
90, 25
               

               
Conread position:
               
51-443
               

               
Cow position:
               
chr22:32698974-32698586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 113
               

               
Conread position:
               
51-505
               

               
Cow position:
               
chr22:43812230-43812654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 84
               

               
Conread position:
               
51-528
               

               
Cow position:
               
chr22:14178625-14179093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
299, 16
               

               
Conread position:
               
51-549
               

               
Cow position:
               
chr22:14690749-14691255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 121
               

               
Conread position:
               
51-555
               

               
Cow position:
               
chr22:18259427-18258936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 86
               

               
Conread position:
               
52-222
               

               
Cow position:
               
chr22:12207499-12207663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
52-245
               

               
Cow position:
               
chr22:30607067-30606877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
127, 24
               

               
Conread position:
               
52-266
               

               
Cow position:
               
chr22:5375603-5375396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
52-294
               

               
Cow position:
               
chr22:24063312-24063064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
82, 16
               

               
Conread position:
               
52-311
               

               
Cow position:
               
chr22:23372649-23372907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
13, 101
               

               
Conread position:
               
52-326
               

               
Cow position:
               
chr22:2100740-2101003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 88
               

               
Conread position:
               
52-328
               

               
Cow position:
               
chr22:7140859-7140584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
13, 134
               

               
Conread position:
               
52-378
               

               
Cow position:
               
chr22:27681934-27681607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
13, 112
               

               
Conread position:
               
52-380
               

               
Cow position:
               
chr22:1871313-1870990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
78, 11
               

               
Conread position:
               
52-395
               

               
Cow position:
               
chr22:37947930-37947597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
298, 45
               

               
Conread position:
               
52-443
               

               
Cow position:
               
chr22:6096809-6097197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
243, 16
               

               
Conread position:
               
52-443
               

               
Cow position:
               
chr22:45796556-45796169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
10, 91
               

               
Conread position:
               
52-463
               

               
Cow position:
               
chr22:11601244-11600840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
193, 131
               

               
Conread position:
               
52-467
               

               
Cow position:
               
chr22:1849281-1848866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
249, 14
               

               
Conread position:
               
52-473
               

               
Cow position:
               
chr22:30999098-30998693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 18
               

               
Conread position:
               
52-516
               

               
Cow position:
               
chr22:5616504-5616052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
298, 24
               

               
Conread position:
               
52-524
               

               
Cow position:
               
chr22:23115095-23115563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 35
               

               
Conread position:
               
52-528
               

               
Cow position:
               
chr22:15490863-15490397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
447, 18
               

               
Conread position:
               
52-529
               

               
Cow position:
               
chr22:10338895-10339375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 199
               

               
Conread position:
               
52-529
               

               
Cow position:
               
chr22:17852430-17852885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 18
               

               
Conread position:
               
52-529
               

               
Cow position:
               
chr22:22613311-22612848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
447, 81
               

               
Conread position:
               
52-537
               

               
Cow position:
               
chr22:40048765-40048292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 16
               

               
Conread position:
               
52-538
               

               
Cow position:
               
chr22:1309530-1309999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
298, 24
               

               
Conread position:
               
52-538
               

               
Cow position:
               
chr22:2404092-2403601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 100
               

               
Conread position:
               
52-538
               

               
Cow position:
               
chr22:27431477-27431955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 16
               

               
Conread position:
               
52-553
               

               
Cow position:
               
chr22:2470029-2470537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
235, 129
               

               
Conread position:
               
52-554
               

               
Cow position:
               
chr22:14142917-14143397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
264, 16
               

               
Conread position:
               
52-554
               

               
Cow position:
               
chr22:26150907-26151410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 80
               

               
Conread position:
               
52-555
               

               
Cow position:
               
chr22:1289321-1289799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
298, 92
               

               
Conread position:
               
52-555
               

               
Cow position:
               
chr22:4075677-4076190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 24
               

               
Conread position:
               
52-555
               

               
Cow position:
               
chr22:10122579-10122097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 82
               

               
Conread position:
               
52-555
               

               
Cow position:
               
chr22:10567510-10567976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
452, 46
               

               
Conread position:
               
52-555
               

               
Cow position:
               
chr22:12573414-12572907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 93
               

               
Conread position:
               
52-555
               

               
Cow position:
               
chr22:18025345-18025849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
8, 25
               

               
Conread position:
               
52-555
               

               
Cow position:
               
chr22:25205757-25206261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 11
               

               
Conread position:
               
52-555
               

               
Cow position:
               
chr22:34895164-34894682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
127, 27
               

               
Conread position:
               
52-555
               

               
Cow position:
               
chr22:36194040-36193568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
447, 80
               

               
Conread position:
               
52-555
               

               
Cow position:
               
chr22:46665288-46665779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
96, 24
               

               
Conread position:
               
53-250
               

               
Cow position:
               
chr22:9735476-9735284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
53-268
               

               
Cow position:
               
chr22:26189081-26188870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
13, 89
               

               
Conread position:
               
53-279
               

               
Cow position:
               
chr22:11189237-11189020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
128, 17
               

               
Conread position:
               
53-294
               

               
Cow position:
               
chr22:1714653-1714891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
11, 111
               

               
Conread position:
               
53-295
               

               
Cow position:
               
chr22:1588505-1588267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
17, 109
               

               
Conread position:
               
53-410
               

               
Cow position:
               
chr22:34632358-34631996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
107, 19
               

               
Conread position:
               
53-554
               

               
Cow position:
               
chr22:8412739-8412233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 101
               

               
Conread position:
               
53-554
               

               
Cow position:
               
chr22:39507829-39508321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 101
               

               
Conread position:
               
53-555
               

               
Cow position:
               
chr22:22023113-22022598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
17, 112
               

               
Conread position:
               
53-555
               

               
Cow position:
               
chr22:43398208-43397727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 53
               

               
Conread position:
               
54-328
               

               
Cow position:
               
chr22:1501090-1500831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
14, 41
               

               
Conread position:
               
54-329
               

               
Cow position:
               
chr22:15737438-15737173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
23, 43
               

               
Conread position:
               
54-336
               

               
Cow position:
               
chr22:12981518-12981789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
85, 98
               

               
Conread position:
               
54-411
               

               
Cow position:
               
chr22:34736059-34735726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
16, 63
               

               
Conread position:
               
54-533
               

               
Cow position:
               
chr22:28639953-28640419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
296, 19
               

               
Conread position:
               
54-537
               

               
Cow position:
               
chr22:26339971-26339488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 212
               

               
Conread position:
               
54-555
               

               
Cow position:
               
chr22:19341402-19340908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 87
               

               
Conread position:
               
55-203
               

               
Cow position:
               
chr22:1987177-1987034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
55-212
               

               
Cow position:
               
chr22:29546845-29546692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
12, 98
               

               
Conread position:
               
55-238
               

               
Cow position:
               
chr22:35627557-35627375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
8, 109
               

               
Conread position:
               
55-240
               

               
Cow position:
               
chr22:2201941-2201765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
11, 34
               

               
Conread position:
               
55-246
               

               
Cow position:
               
chr22:3257459-3257644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
11, 64
               

               
Conread position:
               
55-252
               

               
Cow position:
               
chr22:1105422-1105613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
183, 41
               

               
Conread position:
               
55-255
               

               
Cow position:
               
chr22:27401939-27401747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
55-264
               

               
Cow position:
               
chr22:2704504-2704300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
189, 23
               

               
Conread position:
               
55-293
               

               
Cow position:
               
chr22:12188268-12188505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
77, 112
               

               
Conread position:
               
55-293
               

               
Cow position:
               
chr22:12195354-12195592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
82, 189
               

               
Conread position:
               
55-295
               

               
Cow position:
               
chr22:25809075-25809303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
199, 85
               

               
Conread position:
               
55-299
               

               
Cow position:
               
chr22:1776269-1776028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
138, 108
               

               
Conread position:
               
55-306
               

               
Cow position:
               
chr22:26417486-26417246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
199, 90
               

               
Conread position:
               
55-329
               

               
Cow position:
               
chr22:31599640-31599378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
17, 95
               

               
Conread position:
               
55-348
               

               
Cow position:
               
chr22:6176076-6176368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 108
               

               
Conread position:
               
55-375
               

               
Cow position:
               
chr22:13222332-13222006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
10, 114
               

               
Conread position:
               
55-431
               

               
Cow position:
               
chr22:30818415-30818049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
242, 91
               

               
Conread position:
               
55-438
               

               
Cow position:
               
chr22:27730250-27729885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
20, 188
               

               
Conread position:
               
55-448
               

               
Cow position:
               
chr22:36432765-36433144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
257, 85
               

               
Conread position:
               
55-462
               

               
Cow position:
               
chr22:12803182-12803578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
295, 92
               

               
Conread position:
               
55-464
               

               
Cow position:
               
chr22:44410923-44410541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
16, 91
               

               
Conread position:
               
55-466
               

               
Cow position:
               
chr22:12316013-12315614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
295, 73
               

               
Conread position:
               
55-519
               

               
Cow position:
               
chr22:40120667-40121132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 138
               

               
Conread position:
               
55-521
               

               
Cow position:
               
chr22:10295234-10294795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 86
               

               
Conread position:
               
55-524
               

               
Cow position:
               
chr22:19652784-19653239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
243, 38
               

               
Conread position:
               
55-524
               

               
Cow position:
               
chr22:33447869-33448333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 110
               

               
Conread position:
               
55-527
               

               
Cow position:
               
chr22:14372371-14371906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
295, 13
               

               
Conread position:
               
55-529
               

               
Cow position:
               
chr22:8138050-8138521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 17
               

               
Conread position:
               
55-529
               

               
Cow position:
               
chr22:11131075-11130613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
295, 103
               

               
Conread position:
               
55-553
               

               
Cow position:
               
chr22:6720875-6721354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
247, 96
               

               
Conread position:
               
55-555
               

               
Cow position:
               
chr22:1651697-1651226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
17, 87
               

               
Conread position:
               
55-555
               

               
Cow position:
               
chr22:18838456-18837965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 93
               

               
Conread position:
               
56-224
               

               
Cow position:
               
chr22:19306105-19305939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
123, 14
               

               
Conread position:
               
56-229
               

               
Cow position:
               
chr22:11790193-11790019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
9, 109
               

               
Conread position:
               
56-245
               

               
Cow position:
               
chr22:11039663-11039476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
93, 109
               

               
Conread position:
               
56-252
               

               
Cow position:
               
chr22:12777179-12777364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
56-252
               

               
Cow position:
               
chr22:24890425-24890235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
56-278
               

               
Cow position:
               
chr22:24071453-24071657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
56-301
               

               
Cow position:
               
chr22:6754060-6754301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
151, 12
               

               
Conread position:
               
56-305
               

               
Cow position:
               
chr22:39446499-39446254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
241, 103
               

               
Conread position:
               
56-354
               

               
Cow position:
               
chr22:14214164-14214448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
36, 12
               

               
Conread position:
               
56-359
               

               
Cow position:
               
chr22:1984062-1983762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
83, 112
               

               
Conread position:
               
56-375
               

               
Cow position:
               
chr22:39602490-39602176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
191, 107
               

               
Conread position:
               
56-435
               

               
Cow position:
               
chr22:10416432-10416049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
7, 54
               

               
Conread position:
               
56-525
               

               
Cow position:
               
chr22:7967900-7967439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
246, 14
               

               
Conread position:
               
56-526
               

               
Cow position:
               
chr22:13286653-13286183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
246, 101
               

               
Conread position:
               
56-529
               

               
Cow position:
               
chr22:37202054-37201594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 103
               

               
Conread position:
               
56-536
               

               
Cow position:
               
chr22:15567817-15568289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
251, 84
               

               
Conread position:
               
56-537
               

               
Cow position:
               
chr22:2623300-2623785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 41
               

               
Conread position:
               
56-537
               

               
Cow position:
               
chr22:8883214-8882753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
331, 20
               

               
Conread position:
               
56-554
               

               
Cow position:
               
chr22:28071765-28071263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 63
               

               
Conread position:
               
56-555
               

               
Cow position:
               
chr22:8733141-8733611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
179, 110
               

               
Conread position:
               
56-555
               

               
Cow position:
               
chr22:14091017-14091520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 20
               

               
Conread position:
               
56-555
               

               
Cow position:
               
chr22:23806327-23806839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
19, 113
               

               
Conread position:
               
56-555
               

               
Cow position:
               
chr22:33485420-33485896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
294, 43
               

               
Conread position:
               
56-555
               

               
Cow position:
               
chr22:40072165-40071677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
260, 16
               

               
Conread position:
               
56-555
               

               
Cow position:
               
chr22:40374811-40374314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
294, 100
               

               
Conread position:
               
57-245
               

               
Cow position:
               
chr22:30176924-30176739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
117, 106
               

               
Conread position:
               
57-266
               

               
Cow position:
               
chr22:27275669-27275462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
57-273
               

               
Cow position:
               
chr22:4628765-4628548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
74, 13
               

               
Conread position:
               
57-274
               

               
Cow position:
               
chr22:6359989-6360190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
57-295
               

               
Cow position:
               
chr22:4164185-4163952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
6, 90
               

               
Conread position:
               
57-302
               

               
Cow position:
               
chr22:3430399-3430155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
93, 119
               

               
Conread position:
               
57-308
               

               
Cow position:
               
chr22:4656843-4657083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
122, 19
               

               
Conread position:
               
57-337
               

               
Cow position:
               
chr22:21527112-21526852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
57-358
               

               
Cow position:
               
chr22:25690076-25690370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
177, 11
               

               
Conread position:
               
57-360
               

               
Cow position:
               
chr22:1659369-1659071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
107, 11
               

               
Conread position:
               
57-377
               

               
Cow position:
               
chr22:285162-285467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
11, 95
               

               
Conread position:
               
57-395
               

               
Cow position:
               
chr22:39215408-39215739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
188, 106
               

               
Conread position:
               
57-428
               

               
Cow position:
               
chr22:15618811-15618455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
293, 105
               

               
Conread position:
               
57-429
               

               
Cow position:
               
chr22:43131350-43131708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
89, 112
               

               
Conread position:
               
57-432
               

               
Cow position:
               
chr22:9668783-9668402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
248, 124
               

               
Conread position:
               
57-472
               

               
Cow position:
               
chr22:23689002-23689410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
292, 13
               

               
Conread position:
               
57-472
               

               
Cow position:
               
chr22:41898245-41898652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 75
               

               
Conread position:
               
57-502
               

               
Cow position:
               
chr22:7165172-7164722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
80, 38
               

               
Conread position:
               
57-529
               

               
Cow position:
               
chr22:11696991-11697472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
92, 39
               

               
Conread position:
               
57-534
               

               
Cow position:
               
chr22:36539455-36539934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 53
               

               
Conread position:
               
57-554
               

               
Cow position:
               
chr22:16273845-16273343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 39
               

               
Conread position:
               
57-555
               

               
Cow position:
               
chr22:21890162-21890651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 46
               

               
Conread position:
               
57-555
               

               
Cow position:
               
chr22:39472157-39472668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 124
               

               
Conread position:
               
58-238
               

               
Cow position:
               
chr22:5778876-5779056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
11, 155
               

               
Conread position:
               
58-246
               

               
Cow position:
               
chr22:39471952-39472139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
168, 104
               

               
Conread position:
               
58-252
               

               
Cow position:
               
chr22:6106168-6106363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
91, 118
               

               
Conread position:
               
58-252
               

               
Cow position:
               
chr22:10351168-10350973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
75, 125
               

               
Conread position:
               
58-256
               

               
Cow position:
               
chr22:1074469-1074275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
83, 21
               

               
Conread position:
               
58-301
               

               
Cow position:
               
chr22:18966958-18967191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
58-315
               

               
Cow position:
               
chr22:41341744-41342000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
117, 125
               

               
Conread position:
               
58-359
               

               
Cow position:
               
chr22:17652635-17652343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
245, 82
               

               
Conread position:
               
58-538
               

               
Cow position:
               
chr22:15950187-15950649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
225, 41
               

               
Conread position:
               
58-553
               

               
Cow position:
               
chr22:27322501-27322029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
292, 37
               

               
Conread position:
               
58-554
               

               
Cow position:
               
chr22:22860708-22861202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 86
               

               
Conread position:
               
58-555
               

               
Cow position:
               
chr22:11613629-11613136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 99
               

               
Conread position:
               
58-555
               

               
Cow position:
               
chr22:27171064-27171547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 75
               

               
Conread position:
               
59-224
               

               
Cow position:
               
chr22:1625771-1625932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
140, 92
               

               
Conread position:
               
59-238
               

               
Cow position:
               
chr22:30684926-30684756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
59-267
               

               
Cow position:
               
chr22:12673131-12673337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
120, 11
               

               
Conread position:
               
59-285
               

               
Cow position:
               
chr22:1865984-1865762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
59-295
               

               
Cow position:
               
chr22:17120654-17120426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
135, 19
               

               
Conread position:
               
59-364
               

               
Cow position:
               
chr22:16541448-16541746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
82, 17
               

               
Conread position:
               
59-385
               

               
Cow position:
               
chr22:17193596-17193274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
291, 156
               

               
Conread position:
               
59-389
               

               
Cow position:
               
chr22:12929077-12929394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
291, 19
               

               
Conread position:
               
59-444
               

               
Cow position:
               
chr22:17132205-17132585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
291, 122
               

               
Conread position:
               
59-461
               

               
Cow position:
               
chr22:8430092-8429690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
290, 122
               

               
Conread position:
               
59-505
               

               
Cow position:
               
chr22:25236927-25237376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
87, 139
               

               
Conread position:
               
59-525
               

               
Cow position:
               
chr22:1975822-1975353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 155
               

               
Conread position:
               
59-528
               

               
Cow position:
               
chr22:59814-59344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
264, 11
               

               
Conread position:
               
59-529
               

               
Cow position:
               
chr22:18193668-18193191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
90, 17
               

               
Conread position:
               
59-546
               

               
Cow position:
               
chr22:30699367-30698898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
244, 73
               

               
Conread position:
               
59-553
               

               
Cow position:
               
chr22:21568192-21567713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
291, 17
               

               
Conread position:
               
59-553
               

               
Cow position:
               
chr22:38978044-38977558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
73, 64
               

               
Conread position:
               
59-555
               

               
Cow position:
               
chr22:3987723-3987220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 17
               

               
Conread position:
               
59-555
               

               
Cow position:
               
chr22:11147110-11146613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 17
               

               
Conread position:
               
59-555
               

               
Cow position:
               
chr22:13957445-13957940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
253, 9
               

               
Conread position:
               
59-555
               

               
Cow position:
               
chr22:32327000-32326512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 17
               

               
Conread position:
               
60-300
               

               
Cow position:
               
chr22:16806789-16806563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
11, 82
               

               
Conread position:
               
60-304
               

               
Cow position:
               
chr22:10557472-10557244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
60-528
               

               
Cow position:
               
chr22:41829034-41829495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
89, 133
               

               
Conread position:
               
60-555
               

               
Cow position:
               
chr22:18020830-18021310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 52
               

               
Conread position:
               
61-236
               

               
Cow position:
               
chr22:10594811-10594637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
5, 91
               

               
Conread position:
               
61-237
               

               
Cow position:
               
chr22:23762652-23762823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
61-265
               

               
Cow position:
               
chr22:7518754-7518558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
61-437
               

               
Cow position:
               
chr22:1563040-1563418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 182
               

               
Conread position:
               
61-467
               

               
Cow position:
               
chr22:4373235-4372843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 36
               

               
Conread position:
               
61-489
               

               
Cow position:
               
chr22:6149188-6149606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
173, 122
               

               
Conread position:
               
61-508
               

               
Cow position:
               
chr22:28357226-28356793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 9
               

               
Conread position:
               
61-522
               

               
Cow position:
               
chr22:26786559-26786097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 68
               

               
Conread position:
               
61-534
               

               
Cow position:
               
chr22:6494376-6493906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 191
               

               
Conread position:
               
61-538
               

               
Cow position:
               
chr22:15950669-15951148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
251, 10
               

               
Conread position:
               
61-539
               

               
Cow position:
               
chr22:34441433-34441908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 15
               

               
Conread position:
               
61-550
               

               
Cow position:
               
chr22:36560451-36560940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
67, 18
               

               
Conread position:
               
61-554
               

               
Cow position:
               
chr22:27635680-27635197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
88, 105
               

               
Conread position:
               
61-555
               

               
Cow position:
               
chr22:3301136-3301614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
88, 107
               

               
Conread position:
               
62-246
               

               
Cow position:
               
chr22:29219703-29219886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
87, 102
               

               
Conread position:
               
62-255
               

               
Cow position:
               
chr22:8480307-8480115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
69, 14
               

               
Conread position:
               
62-256
               

               
Cow position:
               
chr22:45788805-45788619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
40, 86
               

               
Conread position:
               
62-271
               

               
Cow position:
               
chr22:35578576-35578784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
8, 102
               

               
Conread position:
               
62-380
               

               
Cow position:
               
chr22:23735813-23736122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
62-463
               

               
Cow position:
               
chr22:46351195-46351580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
36, 60
               

               
Conread position:
               
63-232
               

               
Cow position:
               
chr22:19207536-19207697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
105, 68
               

               
Conread position:
               
63-270
               

               
Cow position:
               
chr22:1304357-1304556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
63-270
               

               
Cow position:
               
chr22:45683836-45684040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
79, 58
               

               
Conread position:
               
63-283
               

               
Cow position:
               
chr22:7584045-7584251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
63-290
               

               
Cow position:
               
chr22:26233831-26233611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
63-299
               

               
Cow position:
               
chr22:11352248-11352483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
76, 179
               

               
Conread position:
               
63-302
               

               
Cow position:
               
chr22:40870028-40869799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
86, 72
               

               
Conread position:
               
63-305
               

               
Cow position:
               
chr22:3470488-3470249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
16, 88
               

               
Conread position:
               
63-336
               

               
Cow position:
               
chr22:42618194-42617932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
7, 28
               

               
Conread position:
               
63-338
               

               
Cow position:
               
chr22:12157651-12157911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
240, 34
               

               
Conread position:
               
63-347
               

               
Cow position:
               
chr22:28672332-28672067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
63-349
               

               
Cow position:
               
chr22:26056669-26056949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 31
               

               
Conread position:
               
63-355
               

               
Cow position:
               
chr22:12678223-12678506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
285, 87
               

               
Conread position:
               
63-373
               

               
Cow position:
               
chr22:13891773-13891464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
112, 86
               

               
Conread position:
               
63-412
               

               
Cow position:
               
chr22:16094708-16095044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
63-417
               

               
Cow position:
               
chr22:15668285-15668622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
116, 78
               

               
Conread position:
               
63-425
               

               
Cow position:
               
chr22:42635234-42635587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
240, 97
               

               
Conread position:
               
63-465
               

               
Cow position:
               
chr22:27047198-27047596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
75, 189
               

               
Conread position:
               
63-475
               

               
Cow position:
               
chr22:12313618-12313214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
7, 70
               

               
Conread position:
               
63-502
               

               
Cow position:
               
chr22:7882748-7882318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 65
               

               
Conread position:
               
63-502
               

               
Cow position:
               
chr22:26166420-26166848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 33
               

               
Conread position:
               
63-516
               

               
Cow position:
               
chr22:39696495-39696046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 69
               

               
Conread position:
               
63-519
               

               
Cow position:
               
chr22:6327576-6328018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 39
               

               
Conread position:
               
63-522
               

               
Cow position:
               
chr22:30269599-30269159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
40, 48
               

               
Conread position:
               
63-523
               

               
Cow position:
               
chr22:25917242-25916785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
86, 102
               

               
Conread position:
               
63-526
               

               
Cow position:
               
chr22:3325785-3325321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 82
               

               
Conread position:
               
63-529
               

               
Cow position:
               
chr22:534687-534230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
282, 63
               

               
Conread position:
               
63-537
               

               
Cow position:
               
chr22:16251367-16251834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
77, 106
               

               
Conread position:
               
63-538
               

               
Cow position:
               
chr22:8877446-8876999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
325, 13
               

               
Conread position:
               
63-540
               

               
Cow position:
               
chr22:33948779-33949275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 76
               

               
Conread position:
               
63-553
               

               
Cow position:
               
chr22:44717918-44717426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 88
               

               
Conread position:
               
63-554
               

               
Cow position:
               
chr22:8324446-8323957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 108
               

               
Conread position:
               
63-555
               

               
Cow position:
               
chr22:4044121-4043644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
221, 31
               

               
Conread position:
               
63-555
               

               
Cow position:
               
chr22:38438960-38439450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
287, 33
               

               
Conread position:
               
63-555
               

               
Cow position:
               
chr22:44741268-44740814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 33
               

               
Conread position:
               
64-236
               

               
Cow position:
               
chr22:14432369-14432542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
85, 53
               

               
Conread position:
               
64-295
               

               
Cow position:
               
chr22:47562908-47562676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
77, 102
               

               
Conread position:
               
64-430
               

               
Cow position:
               
chr22:8090338-8090685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
286, 68
               

               
Conread position:
               
64-528
               

               
Cow position:
               
chr22:1653989-1654458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
177, 119
               

               
Conread position:
               
64-542
               

               
Cow position:
               
chr22:11370395-11370867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 41
               

               
Conread position:
               
64-555
               

               
Cow position:
               
chr22:3250783-3251278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 197
               

               
Conread position:
               
64-555
               

               
Cow position:
               
chr22:4535125-4535615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
77, 38
               

               
Conread position:
               
64-555
               

               
Cow position:
               
chr22:10162164-10161674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 50
               

               
Conread position:
               
65-159
               

               
Cow position:
               
chr22:9745398-9745492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
95
               

               
Alignm identity:
               
81
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
65-217
               

               
Cow position:
               
chr22:45019453-45019598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
65-246
               

               
Cow position:
               
chr22:30615927-30615749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
65-283
               

               
Cow position:
               
chr22:16813991-16813783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
65-290
               

               
Cow position:
               
chr22:21905664-21905450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
48, 79
               

               
Conread position:
               
65-386
               

               
Cow position:
               
chr22:38320511-38320795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
285, 64
               

               
Conread position:
               
65-522
               

               
Cow position:
               
chr22:27581621-27581193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
221, 33
               

               
Conread position:
               
65-526
               

               
Cow position:
               
chr22:23180850-23181294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
276, 55
               

               
Conread position:
               
65-536
               

               
Cow position:
               
chr22:4563552-4563092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 65
               

               
Conread position:
               
65-537
               

               
Cow position:
               
chr22:31870059-31870518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
285, 94
               

               
Conread position:
               
65-551
               

               
Cow position:
               
chr22:28371127-28370658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 85
               

               
Conread position:
               
65-553
               

               
Cow position:
               
chr22:4357279-4356808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
276, 31
               

               
Conread position:
               
66-295
               

               
Cow position:
               
chr22:12829414-12829639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
10, 63
               

               
Conread position:
               
66-311
               

               
Cow position:
               
chr22:12902661-12902891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
228, 85
               

               
Conread position:
               
66-555
               

               
Cow position:
               
chr22:8418659-8418176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 117
               

               
Conread position:
               
67-262
               

               
Cow position:
               
chr22:1830237-1830053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
67-546
               

               
Cow position:
               
chr22:25361671-25361211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 61
               

               
Conread position:
               
68-255
               

               
Cow position:
               
chr22:28493088-28493269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
73, 112
               

               
Conread position:
               
68-277
               

               
Cow position:
               
chr22:1523415-1523209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
81, 140
               

               
Conread position:
               
68-280
               

               
Cow position:
               
chr22:45104072-45104287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
81, 174
               

               
Conread position:
               
68-366
               

               
Cow position:
               
chr22:899031-898746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
68-402
               

               
Cow position:
               
chr22:19827668-19827998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
73, 46
               

               
Conread position:
               
68-423
               

               
Cow position:
               
chr22:31510170-31510522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
65, 28
               

               
Conread position:
               
68-434
               

               
Cow position:
               
chr22:45808022-45807675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
282, 32
               

               
Conread position:
               
68-473
               

               
Cow position:
               
chr22:3367389-3366993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
24, 105
               

               
Conread position:
               
68-508
               

               
Cow position:
               
chr22:20862571-20862987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
214, 61
               

               
Conread position:
               
68-555
               

               
Cow position:
               
chr22:20627026-20626550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 64
               

               
Conread position:
               
69-284
               

               
Cow position:
               
chr22:13866860-13866648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
69-380
               

               
Cow position:
               
chr22:12892169-12892477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
69, 183
               

               
Conread position:
               
69-533
               

               
Cow position:
               
chr22:6215365-6215821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
246, 82
               

               
Conread position:
               
69-538
               

               
Cow position:
               
chr22:32892888-32892428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 27
               

               
Conread position:
               
69-555
               

               
Cow position:
               
chr22:10936657-10937125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 27
               

               
Conread position:
               
69-555
               

               
Cow position:
               
chr22:32480275-32480757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 179
               

               
Conread position:
               
70-285
               

               
Cow position:
               
chr22:8447098-8446899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
199, 71
               

               
Conread position:
               
70-538
               

               
Cow position:
               
chr22:14245247-14245691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 135
               

               
Conread position:
               
70-555
               

               
Cow position:
               
chr22:6600484-6600978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
66, 27
               

               
Conread position:
               
71-555
               

               
Cow position:
               
chr22:44180803-44180301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
61, 186
               

               
Conread position:
               
75-245
               

               
Cow position:
               
chr22:15006926-15007091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
75-249
               

               
Cow position:
               
chr22:18145721-18145549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
150, 57
               

               
Conread position:
               
75-267
               

               
Cow position:
               
chr22:29135141-29134954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
27, 71
               

               
Conread position:
               
75-555
               

               
Cow position:
               
chr22:10532679-10532204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
275, 57
               

               
Conread position:
               
76-232
               

               
Cow position:
               
chr22:33565910-33566061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
76-311
               

               
Cow position:
               
chr22:32514481-32514248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
76-540
               

               
Cow position:
               
chr22:28146867-28146410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 185
               

               
Conread position:
               
77-337
               

               
Cow position:
               
chr22:1026087-1025820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
61, 33
               

               
Conread position:
               
78-240
               

               
Cow position:
               
chr22:755670-755822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
36, 19
               

               
Conread position:
               
78-408
               

               
Cow position:
               
chr22:27066566-27066253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
73, 160
               

               
Conread position:
               
78-412
               

               
Cow position:
               
chr22:40789740-40789426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
78-413
               

               
Cow position:
               
chr22:27267737-27267396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
86, 65
               

               
Conread position:
               
78-448
               

               
Cow position:
               
chr22:12389285-12388913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
219, 85
               

               
Conread position:
               
78-465
               

               
Cow position:
               
chr22:14378509-14378880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
71, 86
               

               
Conread position:
               
78-507
               

               
Cow position:
               
chr22:10315279-10314839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 167
               

               
Conread position:
               
78-555
               

               
Cow position:
               
chr22:10631571-10631083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 44
               

               
Conread position:
               
79-235
               

               
Cow position:
               
chr22:26931043-26930891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
147, 72
               

               
Conread position:
               
79-331
               

               
Cow position:
               
chr22:1350014-1349762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
119, 72
               

               
Conread position:
               
79-538
               

               
Cow position:
               
chr22:31646665-31646222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
226, 31
               

               
Conread position:
               
79-555
               

               
Cow position:
               
chr22:30094425-30093961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 107
               

               
Conread position:
               
79-555
               

               
Cow position:
               
chr22:30484086-30483623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
271, 53
               

               
Conread position:
               
80-362
               

               
Cow position:
               
chr22:4315817-4315535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
29, 153
               

               
Conread position:
               
81-240
               

               
Cow position:
               
chr22:16655560-16655713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
81-536
               

               
Cow position:
               
chr22:9127589-9127136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 78
               

               
Conread position:
               
82-555
               

               
Cow position:
               
chr22:45513345-45513812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 83
               

               
Conread position:
               
84-300
               

               
Cow position:
               
chr22:30253393-30253168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
57, 171
               

               
Conread position:
               
84-555
               

               
Cow position:
               
chr22:14365775-14366246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 81
               

               
Conread position:
               
85-358
               

               
Cow position:
               
chr22:43321527-43321259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
121, 97
               

               
Conread position:
               
85-555
               

               
Cow position:
               
chr22:30515446-30514963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 65
               

               
Conread position:
               
88-554
               

               
Cow position:
               
chr22:38930331-38930805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
262, 74
               

               
Conread position:
               
89-555
               

               
Cow position:
               
chr22:29289977-29290428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 32
               

               
Conread position:
               
96-554
               

               
Cow position:
               
chr22:4119398-4119859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
240, 63
               

               
Conread position:
               
98-411
               

               
Cow position:
               
chr22:17224505-17224806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
9, 48
               

               
Conread position:
               
98-555
               

               
Cow position:
               
chr22:15039021-15039477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 58
               

               
Conread position:
               
101-555
               

               
Cow position:
               
chr22:1067754-1068207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
249, 6
               

               
Conread position:
               
102-337
               

               
Cow position:
               
chr22:9171566-9171338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
201, 34
               

               
Conread position:
               
105-555
               

               
Cow position:
               
chr22:8481803-8481356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 32
               

               
Conread position:
               
110-283
               

               
Cow position:
               
chr22:8710222-8710388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
7, 32
               

               
Conread position:
               
120-536
               

               
Cow position:
               
chr22:30049428-30049844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
225, 11
               

               
Conread position:
               
120-555
               

               
Cow position:
               
chr22:4017622-4017183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 113
               

               
Conread position:
               
122-404
               

               
Cow position:
               
chr22:25387468-25387189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
10, 25
               

               
Conread position:
               
124-331
               

               
Cow position:
               
chr22:23440156-23440357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
173, 38
               

               
Conread position:
               
124-432
               

               
Cow position:
               
chr22:19173842-19173536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
84, 38
               

               
Conread position:
               
124-528
               

               
Cow position:
               
chr22:10421175-10420758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
25, 90
               

               
Conread position:
               
124-536
               

               
Cow position:
               
chr22:846047-845633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 130
               

               
Conread position:
               
124-555
               

               
Cow position:
               
chr22:877653-877231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
226, 36
               

               
Conread position:
               
126-329
               

               
Cow position:
               
chr22:29185474-29185667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
128-540
               

               
Cow position:
               
chr22:1591155-1590749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 28
               

               
Conread position:
               
131-555
               

               
Cow position:
               
chr22:21295594-21296015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 18
               

               
Conread position:
               
132-301
               

               
Cow position:
               
chr22:1977881-1977716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
132-308
               

               
Cow position:
               
chr22:23036295-23036124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
122, 26
               

               
Conread position:
               
132-373
               

               
Cow position:
               
chr22:34104542-34104780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
179, 28
               

               
Conread position:
               
132-494
               

               
Cow position:
               
chr22:43119599-43119954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
218, 13
               

               
Conread position:
               
132-518
               

               
Cow position:
               
chr22:3965318-3964933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
218, 31
               

               
Conread position:
               
132-537
               

               
Cow position:
               
chr22:23176308-23176722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
17, 32
               

               
Conread position:
               
132-552
               

               
Cow position:
               
chr22:3317250-3316840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
209, 28
               

               
Conread position:
               
132-555
               

               
Cow position:
               
chr22:3950382-3949949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
209, 28
               

               
Conread position:
               
135-290
               

               
Cow position:
               
chr22:10324008-10323858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
138-539
               

               
Cow position:
               
chr22:21355014-21355414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 113
               

               
Conread position:
               
139-553
               

               
Cow position:
               
chr22:2216935-2216534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
211, 95
               

               
Conread position:
               
141-555
               

               
Cow position:
               
chr22:23857166-23856756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 17
               

               
Conread position:
               
146-536
               

               
Cow position:
               
chr22:42612578-42612188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
165, 94
               

               
Conread position:
               
147-381
               

               
Cow position:
               
chr22:12527007-12527237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
156, 15
               

               
Conread position:
               
147-401
               

               
Cow position:
               
chr22:12341312-12341061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
160, 17
               

               
Conread position:
               
147-553
               

               
Cow position:
               
chr22:34712843-34712427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
201, 35
               

               
Conread position:
               
147-555
               

               
Cow position:
               
chr22:590456-590056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 15
               

               
Conread position:
               
150-301
               

               
Cow position:
               
chr22:1838423-1838277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
150-505
               

               
Cow position:
               
chr22:5384766-5384420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
155, 13
               

               
Conread position:
               
151-555
               

               
Cow position:
               
chr22:13861689-13861297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 11
               

               
Conread position:
               
151-555
               

               
Cow position:
               
chr22:21502857-21502444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 11
               

               
Conread position:
               
152-490
               

               
Cow position:
               
chr22:3269375-3269702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
102, 90
               

               
Conread position:
               
153-536
               

               
Cow position:
               
chr22:41245365-41244976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
101, 10
               

               
Conread position:
               
154-524
               

               
Cow position:
               
chr22:12967959-12968327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
196, 9
               

               
Conread position:
               
158-335
               

               
Cow position:
               
chr22:12686579-12686744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
162-389
               

               
Cow position:
               
chr22:4011288-4011064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
10, 84
               

               
Conread position:
               
162-528
               

               
Cow position:
               
chr22:26141377-26141012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 27
               

               
Conread position:
               
162-555
               

               
Cow position:
               
chr22:864412-864812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 69
               

               
Conread position:
               
162-555
               

               
Cow position:
               
chr22:4645874-4645485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 15
               

               
Conread position:
               
162-555
               

               
Cow position:
               
chr22:13300514-13300128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 80
               

               
Conread position:
               
163-367
               

               
Cow position:
               
chr22:10669372-10669572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
122, 13
               

               
Conread position:
               
163-426
               

               
Cow position:
               
chr22:45846243-45845989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
187, 8
               

               
Conread position:
               
163-483
               

               
Cow position:
               
chr22:11458917-11458608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
186, 22
               

               
Conread position:
               
163-553
               

               
Cow position:
               
chr22:17814334-17813939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 69
               

               
Conread position:
               
164-528
               

               
Cow position:
               
chr22:14638376-14638727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
44, 48
               

               
Conread position:
               
164-532
               

               
Cow position:
               
chr22:15090843-15090474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 78
               

               
Conread position:
               
165-331
               

               
Cow position:
               
chr22:21235332-21235495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
89, 31
               

               
Conread position:
               
167-443
               

               
Cow position:
               
chr22:9283500-9283772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 74
               

               
Conread position:
               
169-529
               

               
Cow position:
               
chr22:21408321-21407945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
77, 91
               

               
Conread position:
               
170-555
               

               
Cow position:
               
chr22:17764474-17764083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 64
               

               
Conread position:
               
176-555
               

               
Cow position:
               
chr22:22160815-22160429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 75
               

               
Conread position:
               
190-408
               

               
Cow position:
               
chr22:30577590-30577384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
64, 52
               

               
Conread position:
               
190-526
               

               
Cow position:
               
chr22:31592781-31593121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
107, 50
               

               
Conread position:
               
193-473
               

               
Cow position:
               
chr22:5675109-5675376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
159, 22
               

               
Conread position:
               
193-536
               

               
Cow position:
               
chr22:30964200-30963862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
104, 47
               

               
Conread position:
               
196-532
               

               
Cow position:
               
chr22:912167-911836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 55
               

               
Conread position:
               
199-536
               

               
Cow position:
               
chr22:35753243-35753576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
128, 41
               

               
Conread position:
               
199-553
               

               
Cow position:
               
chr22:14882050-14882401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 46
               

               
Conread position:
               
199-555
               

               
Cow position:
               
chr22:17992965-17993322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 42
               

               
Conread position:
               
204-555
               

               
Cow position:
               
chr22:3993670-3993322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 7
               

               
Conread position:
               
209-465
               

               
Cow position:
               
chr22:10677935-10678181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
185, 32
               

               
Conread position:
               
209-555
               

               
Cow position:
               
chr22:1987050-1986716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
45, 33
               

               
Conread position:
               
211-426
               

               
Cow position:
               
chr22:1874747-1874536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
211-555
               

               
Cow position:
               
chr22:26097566-26097902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 17
               

               
Conread position:
               
211-555
               

               
Cow position:
               
chr22:34597984-34597640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 39
               

               
Conread position:
               
215-546
               

               
Cow position:
               
chr22:226404-226716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
96, 33
               

               
Conread position:
               
231-516
               

               
Cow position:
               
chr22:27292125-27291851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
122, 11
               

               
Conread position:
               
232-503
               

               
Cow position:
               
chr22:10585670-10585934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
86, 9
               

               
Conread position:
               
232-555
               

               
Cow position:
               
chr22:41270968-41271282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
120, 19
               

               
Conread position:
               
241-555
               

               
Cow position:
               
chr22:36569525-36569834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 14
               

               
Conread position:
               
253-555
               

               
Cow position:
               
chr22:13951195-13950880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
255-529
               

               
Cow position:
               
chr22:14186583-14186303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
94, 66
               

               
Conread position:
               
257-536
               

               
Cow position:
               
chr22:6360475-6360760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
45, 155
               

               
Conread position:
               
265-555
               

               
Cow position:
               
chr22:9734858-9734567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 36
               

               
Conread position:
               
275-554
               

               
Cow position:
               
chr22:24734318-24734602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
75, 24
               

               
Conread position:
               
279-555
               

               
Cow position:
               
chr22:1342727-1342450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 178
               

               
Conread position:
               
301-555
               

               
Cow position:
               
chr22:47927725-47927470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
50, 16
               

               
Conread position:
               
304-468
               

               
Cow position:
               
chr22:7252676-7252847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
307-521
               

               
Cow position:
               
chr22:21905459-21905239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
8, 116
               

               
Conread position:
               
325-555
               

               
Cow position:
               
chr22:23249760-23250001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
20, 10
               

               
Conread position:
               
326-555
               

               
Cow position:
               
chr22:11200980-11200754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
24, 74
               

               
Conread position:
               
349-532
               

               
Cow position:
               
chr22:11489453-11489278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
150, 73
               

               
Conread position:
               
349-552
               

               
Cow position:
               
chr22:19714844-19714640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
150, 74
               

               
Conread position:
               
351-539
               

               
Cow position:
               
chr22:34930826-34931021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
351-555
               

               
Cow position:
               
chr22:8357532-8357322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
148, 0
               
Show alignments to all cow chromosomes.