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Cow genome map

           
Conread name:
           
rpro40_a11.y1
        

               
Conread position:
               
42-241
               

               
Cow position:
               
chr23:33702168-33702365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
119, 21
               

               
Conread position:
               
43-311
               

               
Cow position:
               
chr23:25990216-25990475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
259, 25
               

               
Conread position:
               
44-337
               

               
Cow position:
               
chr23:40995387-40995110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
16, 53
               

               
Conread position:
               
44-458
               

               
Cow position:
               
chr23:3281888-3282299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 26
               

               
Conread position:
               
45-309
               

               
Cow position:
               
chr23:11225075-11224820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
134, 32
               

               
Conread position:
               
45-357
               

               
Cow position:
               
chr23:14524221-14523901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
15, 214
               

               
Conread position:
               
45-473
               

               
Cow position:
               
chr23:40444077-40443666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
256, 10
               

               
Conread position:
               
45-486
               

               
Cow position:
               
chr23:40790185-40789773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
134, 9
               

               
Conread position:
               
46-338
               

               
Cow position:
               
chr23:19565667-19565386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
64, 49
               

               
Conread position:
               
46-483
               

               
Cow position:
               
chr23:1776434-1776840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
397, 23
               

               
Conread position:
               
48-252
               

               
Cow position:
               
chr23:33232478-33232683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
19, 118
               

               
Conread position:
               
48-292
               

               
Cow position:
               
chr23:4090642-4090409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
19, 165
               

               
Conread position:
               
48-336
               

               
Cow position:
               
chr23:5881299-5881579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
5, 100
               

               
Conread position:
               
48-555
               

               
Cow position:
               
chr23:534449-533946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 107
               

               
Conread position:
               
49-245
               

               
Cow position:
               
chr23:11053682-11053867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
135, 19
               

               
Conread position:
               
50-425
               

               
Cow position:
               
chr23:38248-37886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
20, 62
               

               
Conread position:
               
50-502
               

               
Cow position:
               
chr23:1884956-1885403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 88
               

               
Conread position:
               
50-554
               

               
Cow position:
               
chr23:7845506-7845003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 47
               

               
Conread position:
               
50-554
               

               
Cow position:
               
chr23:22297814-22298302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 18
               

               
Conread position:
               
50-554
               

               
Cow position:
               
chr23:39049218-39049698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
10, 106
               

               
Conread position:
               
51-167
               

               
Cow position:
               
chr23:1438495-1438379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
15, 96
               

               
Conread position:
               
51-218
               

               
Cow position:
               
chr23:3917655-3917812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
51-245
               

               
Cow position:
               
chr23:29330527-29330334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
9, 21
               

               
Conread position:
               
51-304
               

               
Cow position:
               
chr23:4003865-4003612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
193, 112
               

               
Conread position:
               
51-310
               

               
Cow position:
               
chr23:31263116-31262854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
143, 25
               

               
Conread position:
               
51-311
               

               
Cow position:
               
chr23:18823200-18822953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
52-185
               

               
Cow position:
               
chr23:24689502-24689372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
52-220
               

               
Cow position:
               
chr23:26975253-26975414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
52-224
               

               
Cow position:
               
chr23:27526800-27526631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
52-238
               

               
Cow position:
               
chr23:20397248-20397435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
13, 114
               

               
Conread position:
               
52-245
               

               
Cow position:
               
chr23:17462807-17462616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
94, 111
               

               
Conread position:
               
52-249
               

               
Cow position:
               
chr23:29972613-29972409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
73, 18
               

               
Conread position:
               
52-252
               

               
Cow position:
               
chr23:15056361-15056553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
52-254
               

               
Cow position:
               
chr23:2395384-2395580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
52-271
               

               
Cow position:
               
chr23:809721-809506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
117, 26
               

               
Conread position:
               
52-284
               

               
Cow position:
               
chr23:18739244-18739475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
13, 113
               

               
Conread position:
               
52-286
               

               
Cow position:
               
chr23:1194281-1194504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
52-286
               

               
Cow position:
               
chr23:28574922-28574697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
97, 26
               

               
Conread position:
               
52-289
               

               
Cow position:
               
chr23:17597636-17597411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
52-299
               

               
Cow position:
               
chr23:7709997-7709765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
52-300
               

               
Cow position:
               
chr23:28798303-28798051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
80, 10
               

               
Conread position:
               
52-304
               

               
Cow position:
               
chr23:8698642-8698391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 203
               

               
Conread position:
               
52-336
               

               
Cow position:
               
chr23:40275343-40275605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
249, 18
               

               
Conread position:
               
52-337
               

               
Cow position:
               
chr23:1533117-1532844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
12, 73
               

               
Conread position:
               
52-337
               

               
Cow position:
               
chr23:35965365-35965081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 118
               

               
Conread position:
               
52-379
               

               
Cow position:
               
chr23:24685453-24685147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
298, 16
               

               
Conread position:
               
52-381
               

               
Cow position:
               
chr23:11212717-11212399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
253, 17
               

               
Conread position:
               
52-407
               

               
Cow position:
               
chr23:5732751-5732417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
298, 21
               

               
Conread position:
               
52-417
               

               
Cow position:
               
chr23:12363402-12363761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 107
               

               
Conread position:
               
52-443
               

               
Cow position:
               
chr23:34356857-34356468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
11, 89
               

               
Conread position:
               
52-453
               

               
Cow position:
               
chr23:12334437-12334032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
66, 176
               

               
Conread position:
               
52-465
               

               
Cow position:
               
chr23:1942949-1942530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
79, 33
               

               
Conread position:
               
52-479
               

               
Cow position:
               
chr23:4646726-4646308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 97
               

               
Conread position:
               
52-492
               

               
Cow position:
               
chr23:2501644-2502067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
298, 16
               

               
Conread position:
               
52-494
               

               
Cow position:
               
chr23:24704498-24704059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 42
               

               
Conread position:
               
52-540
               

               
Cow position:
               
chr23:1337092-1337575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
298, 111
               

               
Conread position:
               
52-554
               

               
Cow position:
               
chr23:4528653-4529178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
73, 49
               

               
Conread position:
               
52-555
               

               
Cow position:
               
chr23:343966-344462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 14
               

               
Conread position:
               
52-555
               

               
Cow position:
               
chr23:4578819-4579324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 112
               

               
Conread position:
               
52-555
               

               
Cow position:
               
chr23:16246953-16246457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
25, 107
               

               
Conread position:
               
52-555
               

               
Cow position:
               
chr23:39778612-39778129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
258, 42
               

               
Conread position:
               
53-238
               

               
Cow position:
               
chr23:20725479-20725655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
53-264
               

               
Cow position:
               
chr23:6179334-6179536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
53-292
               

               
Cow position:
               
chr23:1760617-1760864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
14, 200
               

               
Conread position:
               
53-356
               

               
Cow position:
               
chr23:40391687-40391395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
246, 15
               

               
Conread position:
               
53-555
               

               
Cow position:
               
chr23:20744369-20744876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 17
               

               
Conread position:
               
54-290
               

               
Cow position:
               
chr23:1877682-1877912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
13, 99
               

               
Conread position:
               
54-347
               

               
Cow position:
               
chr23:39330084-39330361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
127, 15
               

               
Conread position:
               
54-535
               

               
Cow position:
               
chr23:16582696-16583173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
294, 18
               

               
Conread position:
               
55-251
               

               
Cow position:
               
chr23:665568-665766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
94, 131
               

               
Conread position:
               
55-255
               

               
Cow position:
               
chr23:39864867-39864668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
80, 15
               

               
Conread position:
               
55-262
               

               
Cow position:
               
chr23:16664192-16664393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
55-282
               

               
Cow position:
               
chr23:40737802-40738027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
15, 109
               

               
Conread position:
               
55-284
               

               
Cow position:
               
chr23:22530223-22530453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
15, 79
               

               
Conread position:
               
55-295
               

               
Cow position:
               
chr23:2359088-2358859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
191, 52
               

               
Conread position:
               
55-295
               

               
Cow position:
               
chr23:4844822-4844585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
157, 13
               

               
Conread position:
               
55-296
               

               
Cow position:
               
chr23:22238607-22238844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
15, 45
               

               
Conread position:
               
55-298
               

               
Cow position:
               
chr23:9220617-9220383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
55-318
               

               
Cow position:
               
chr23:20093036-20093286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
55-359
               

               
Cow position:
               
chr23:24927038-24926727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
86, 54
               

               
Conread position:
               
55-388
               

               
Cow position:
               
chr23:40348434-40348755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
176, 85
               

               
Conread position:
               
55-467
               

               
Cow position:
               
chr23:33570343-33569942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
286, 77
               

               
Conread position:
               
55-491
               

               
Cow position:
               
chr23:29801646-29801215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
139, 15
               

               
Conread position:
               
55-494
               

               
Cow position:
               
chr23:16689853-16690282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
295, 127
               

               
Conread position:
               
55-533
               

               
Cow position:
               
chr23:5617789-5617317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 106
               

               
Conread position:
               
55-534
               

               
Cow position:
               
chr23:3394288-3394752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 17
               

               
Conread position:
               
55-536
               

               
Cow position:
               
chr23:1429037-1428552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 121
               

               
Conread position:
               
55-537
               

               
Cow position:
               
chr23:15286939-15287402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 88
               

               
Conread position:
               
55-549
               

               
Cow position:
               
chr23:13555221-13555707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
81, 53
               

               
Conread position:
               
55-555
               

               
Cow position:
               
chr23:1290518-1290016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 201
               

               
Conread position:
               
55-555
               

               
Cow position:
               
chr23:1883604-1883106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 15
               

               
Conread position:
               
55-555
               

               
Cow position:
               
chr23:40778474-40777976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 21
               

               
Conread position:
               
56-154
               

               
Cow position:
               
chr23:532900-532998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
99
               

               
Alignm identity:
               
83
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
56-215
               

               
Cow position:
               
chr23:23034228-23034383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
10, 102
               

               
Conread position:
               
56-261
               

               
Cow position:
               
chr23:23104278-23104476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
10, 90
               

               
Conread position:
               
56-300
               

               
Cow position:
               
chr23:13137728-13137962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
123, 84
               

               
Conread position:
               
56-337
               

               
Cow position:
               
chr23:16961497-16961234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
56-389
               

               
Cow position:
               
chr23:3890362-3890679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
95, 14
               

               
Conread position:
               
56-410
               

               
Cow position:
               
chr23:5436790-5437134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
294, 107
               

               
Conread position:
               
56-441
               

               
Cow position:
               
chr23:16744755-16744380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
10, 82
               

               
Conread position:
               
56-488
               

               
Cow position:
               
chr23:18901856-18902265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
294, 14
               

               
Conread position:
               
56-534
               

               
Cow position:
               
chr23:26986062-26986537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 14
               

               
Conread position:
               
56-555
               

               
Cow position:
               
chr23:4727003-4726515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
162, 89
               

               
Conread position:
               
56-555
               

               
Cow position:
               
chr23:14164166-14164691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 14
               

               
Conread position:
               
56-555
               

               
Cow position:
               
chr23:25864483-25864966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 107
               

               
Conread position:
               
56-555
               

               
Cow position:
               
chr23:40502301-40502789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
178, 125
               

               
Conread position:
               
57-205
               

               
Cow position:
               
chr23:2511356-2511211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
14, 84
               

               
Conread position:
               
57-245
               

               
Cow position:
               
chr23:4416075-4416261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
57-245
               

               
Cow position:
               
chr23:30617266-30617453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
92, 106
               

               
Conread position:
               
57-278
               

               
Cow position:
               
chr23:27849206-27848992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
13, 42
               

               
Conread position:
               
57-286
               

               
Cow position:
               
chr23:22668301-22668517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
14, 84
               

               
Conread position:
               
57-301
               

               
Cow position:
               
chr23:2471215-2470975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
57-303
               

               
Cow position:
               
chr23:27860001-27859756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
217, 124
               

               
Conread position:
               
57-311
               

               
Cow position:
               
chr23:14394878-14394630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
57-337
               

               
Cow position:
               
chr23:1614447-1614720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
57-337
               

               
Cow position:
               
chr23:19760575-19760850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
42, 89
               

               
Conread position:
               
57-365
               

               
Cow position:
               
chr23:3293899-3293601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
239, 78
               

               
Conread position:
               
57-380
               

               
Cow position:
               
chr23:307668-307352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
236, 106
               

               
Conread position:
               
57-380
               

               
Cow position:
               
chr23:3244705-3245021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
92, 142
               

               
Conread position:
               
57-412
               

               
Cow position:
               
chr23:22414099-22414431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
63, 75
               

               
Conread position:
               
57-424
               

               
Cow position:
               
chr23:5436431-5436794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
92, 19
               

               
Conread position:
               
57-424
               

               
Cow position:
               
chr23:10829369-10829732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
137, 124
               

               
Conread position:
               
57-425
               

               
Cow position:
               
chr23:34611285-34611621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
12, 81
               

               
Conread position:
               
57-443
               

               
Cow position:
               
chr23:1768062-1767661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
9, 214
               

               
Conread position:
               
57-448
               

               
Cow position:
               
chr23:19221427-19221825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
26, 128
               

               
Conread position:
               
57-451
               

               
Cow position:
               
chr23:8837480-8837864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
190, 39
               

               
Conread position:
               
57-465
               

               
Cow position:
               
chr23:16848183-16847771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
13, 125
               

               
Conread position:
               
57-482
               

               
Cow position:
               
chr23:30585439-30585870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
231, 105
               

               
Conread position:
               
57-497
               

               
Cow position:
               
chr23:20557634-20558082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
184, 11
               

               
Conread position:
               
57-516
               

               
Cow position:
               
chr23:26848685-26849146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
87, 126
               

               
Conread position:
               
57-538
               

               
Cow position:
               
chr23:9874869-9874407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
80, 13
               

               
Conread position:
               
57-543
               

               
Cow position:
               
chr23:187389-186899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 84
               

               
Conread position:
               
57-555
               

               
Cow position:
               
chr23:3247799-3247304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 105
               

               
Conread position:
               
58-300
               

               
Cow position:
               
chr23:1759456-1759221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
58-348
               

               
Cow position:
               
chr23:1863669-1863399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
63, 38
               

               
Conread position:
               
58-523
               

               
Cow position:
               
chr23:4995887-4996337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
116, 90
               

               
Conread position:
               
59-216
               

               
Cow position:
               
chr23:13836930-13836774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
92, 19
               

               
Conread position:
               
59-244
               

               
Cow position:
               
chr23:4291564-4291381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
113, 17
               

               
Conread position:
               
59-380
               

               
Cow position:
               
chr23:22573698-22574022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
180, 103
               

               
Conread position:
               
59-497
               

               
Cow position:
               
chr23:15743299-15742876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
290, 58
               

               
Conread position:
               
59-534
               

               
Cow position:
               
chr23:8293717-8293238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 17
               

               
Conread position:
               
59-536
               

               
Cow position:
               
chr23:3967347-3967812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 11
               

               
Conread position:
               
60-236
               

               
Cow position:
               
chr23:5215705-5215882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
91, 110
               

               
Conread position:
               
60-304
               

               
Cow position:
               
chr23:5449927-5449675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
89, 30
               

               
Conread position:
               
61-269
               

               
Cow position:
               
chr23:24809232-24809433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
160, 9
               

               
Conread position:
               
61-318
               

               
Cow position:
               
chr23:30244731-30244496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
61-380
               

               
Cow position:
               
chr23:9226478-9226169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
198, 8
               

               
Conread position:
               
61-527
               

               
Cow position:
               
chr23:6244396-6244843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
390, 80
               

               
Conread position:
               
61-555
               

               
Cow position:
               
chr23:29626632-29626127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 187
               

               
Conread position:
               
62-234
               

               
Cow position:
               
chr23:5603542-5603709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
62-282
               

               
Cow position:
               
chr23:5395278-5395484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
192, 70
               

               
Conread position:
               
62-286
               

               
Cow position:
               
chr23:1653210-1652989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
76, 58
               

               
Conread position:
               
62-302
               

               
Cow position:
               
chr23:3234572-3234810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
11, 116
               

               
Conread position:
               
62-397
               

               
Cow position:
               
chr23:1222036-1222361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
241, 45
               

               
Conread position:
               
62-472
               

               
Cow position:
               
chr23:29786138-29786551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
214, 119
               

               
Conread position:
               
63-206
               

               
Cow position:
               
chr23:4505016-4504876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
63-232
               

               
Cow position:
               
chr23:18822228-18822397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
86, 74
               

               
Conread position:
               
63-237
               

               
Cow position:
               
chr23:9726336-9726508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
86, 13
               

               
Conread position:
               
63-240
               

               
Cow position:
               
chr23:21638577-21638407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
63-252
               

               
Cow position:
               
chr23:1480846-1480658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
63-252
               

               
Cow position:
               
chr23:4979079-4979263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
40, 99
               

               
Conread position:
               
63-255
               

               
Cow position:
               
chr23:5685992-5686181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
63-256
               

               
Cow position:
               
chr23:38992892-38993075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
181, 33
               

               
Conread position:
               
63-268
               

               
Cow position:
               
chr23:9131760-9131955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
63-279
               

               
Cow position:
               
chr23:21423970-21423762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
63-283
               

               
Cow position:
               
chr23:35656613-35656402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
63-286
               

               
Cow position:
               
chr23:40500893-40501110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
63-295
               

               
Cow position:
               
chr23:39267989-39267763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
131, 99
               

               
Conread position:
               
63-308
               

               
Cow position:
               
chr23:35930152-35929916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
63-337
               

               
Cow position:
               
chr23:1981469-1981716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
63-348
               

               
Cow position:
               
chr23:33629126-33628853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
114, 35
               

               
Conread position:
               
63-366
               

               
Cow position:
               
chr23:385104-385404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
234, 144
               

               
Conread position:
               
63-424
               

               
Cow position:
               
chr23:32479813-32480186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
174, 85
               

               
Conread position:
               
63-472
               

               
Cow position:
               
chr23:5451526-5451123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 103
               

               
Conread position:
               
63-505
               

               
Cow position:
               
chr23:10416223-10416653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
8, 70
               

               
Conread position:
               
63-525
               

               
Cow position:
               
chr23:2281984-2282428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
287, 39
               

               
Conread position:
               
63-526
               

               
Cow position:
               
chr23:16880966-16881412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
287, 75
               

               
Conread position:
               
63-533
               

               
Cow position:
               
chr23:20388461-20388898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
7, 58
               

               
Conread position:
               
63-535
               

               
Cow position:
               
chr23:26949395-26948926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
183, 63
               

               
Conread position:
               
63-546
               

               
Cow position:
               
chr23:31494073-31493601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 36
               

               
Conread position:
               
63-553
               

               
Cow position:
               
chr23:26841626-26841167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
238, 95
               

               
Conread position:
               
63-554
               

               
Cow position:
               
chr23:5162646-5162141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
66, 110
               

               
Conread position:
               
63-555
               

               
Cow position:
               
chr23:9734624-9734132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 109
               

               
Conread position:
               
63-555
               

               
Cow position:
               
chr23:14838557-14839019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
286, 39
               

               
Conread position:
               
63-555
               

               
Cow position:
               
chr23:37066060-37065553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 105
               

               
Conread position:
               
64-237
               

               
Cow position:
               
chr23:1510725-1510893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
64-263
               

               
Cow position:
               
chr23:36200603-36200415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
13, 77
               

               
Conread position:
               
64-360
               

               
Cow position:
               
chr23:24966258-24966549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
275, 97
               

               
Conread position:
               
64-417
               

               
Cow position:
               
chr23:3408683-3409047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
68, 199
               

               
Conread position:
               
64-432
               

               
Cow position:
               
chr23:18286385-18286039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
238, 14
               

               
Conread position:
               
64-468
               

               
Cow position:
               
chr23:5426640-5426233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 80
               

               
Conread position:
               
64-476
               

               
Cow position:
               
chr23:20248491-20248902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
130, 73
               

               
Conread position:
               
64-555
               

               
Cow position:
               
chr23:24509887-24509416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
286, 68
               

               
Conread position:
               
65-234
               

               
Cow position:
               
chr23:28814581-28814412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
159, 97
               

               
Conread position:
               
65-240
               

               
Cow position:
               
chr23:1490556-1490392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
25, 68
               

               
Conread position:
               
65-255
               

               
Cow position:
               
chr23:24718601-24718786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
140, 86
               

               
Conread position:
               
65-271
               

               
Cow position:
               
chr23:7155499-7155690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
65-337
               

               
Cow position:
               
chr23:20539581-20539321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
119, 67
               

               
Conread position:
               
65-357
               

               
Cow position:
               
chr23:3814059-3814364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
68, 193
               

               
Conread position:
               
65-540
               

               
Cow position:
               
chr23:33711964-33711502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
285, 98
               

               
Conread position:
               
66-247
               

               
Cow position:
               
chr23:10844760-10844580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
165, 0
               

               
Conread position:
               
68-279
               

               
Cow position:
               
chr23:12405622-12405825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
68-347
               

               
Cow position:
               
chr23:40637463-40637184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
64, 52
               

               
Conread position:
               
68-555
               

               
Cow position:
               
chr23:22804921-22804437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
280, 16
               

               
Conread position:
               
69-255
               

               
Cow position:
               
chr23:32126503-32126320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
72, 99
               

               
Conread position:
               
69-314
               

               
Cow position:
               
chr23:10497894-10497661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
60, 72
               

               
Conread position:
               
69-323
               

               
Cow position:
               
chr23:40095380-40095141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
31, 69
               

               
Conread position:
               
69-389
               

               
Cow position:
               
chr23:5795674-5795363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 82
               

               
Conread position:
               
69-534
               

               
Cow position:
               
chr23:20194732-20195181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
281, 48
               

               
Conread position:
               
69-555
               

               
Cow position:
               
chr23:34314754-34315255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
22, 96
               

               
Conread position:
               
70-526
               

               
Cow position:
               
chr23:11314820-11315272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 195
               

               
Conread position:
               
71-527
               

               
Cow position:
               
chr23:41472821-41472357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
78, 68
               

               
Conread position:
               
75-255
               

               
Cow position:
               
chr23:5927430-5927600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
59, 71
               

               
Conread position:
               
76-521
               

               
Cow position:
               
chr23:9599679-9599252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 42
               

               
Conread position:
               
78-246
               

               
Cow position:
               
chr23:36022603-36022764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
78-304
               

               
Cow position:
               
chr23:22587067-22586850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
78-337
               

               
Cow position:
               
chr23:13202182-13202423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
223, 34
               

               
Conread position:
               
78-378
               

               
Cow position:
               
chr23:15280306-15280602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
271, 16
               

               
Conread position:
               
78-380
               

               
Cow position:
               
chr23:2286013-2285742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
131, 41
               

               
Conread position:
               
78-404
               

               
Cow position:
               
chr23:2160453-2160765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
220, 46
               

               
Conread position:
               
78-465
               

               
Cow position:
               
chr23:22496369-22496758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
240, 99
               

               
Conread position:
               
78-526
               

               
Cow position:
               
chr23:26632989-26632545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 23
               

               
Conread position:
               
78-536
               

               
Cow position:
               
chr23:1536509-1536063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
304, 59
               

               
Conread position:
               
79-468
               

               
Cow position:
               
chr23:1585211-1585583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
355, 78
               

               
Conread position:
               
81-542
               

               
Cow position:
               
chr23:21452546-21453004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 66
               

               
Conread position:
               
83-359
               

               
Cow position:
               
chr23:17486643-17486911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
201, 62
               

               
Conread position:
               
92-516
               

               
Cow position:
               
chr23:6768084-6767647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 71
               

               
Conread position:
               
94-292
               

               
Cow position:
               
chr23:4501918-4501734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
8, 58
               

               
Conread position:
               
94-308
               

               
Cow position:
               
chr23:26825235-26825037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
160, 47
               

               
Conread position:
               
100-493
               

               
Cow position:
               
chr23:1490205-1489837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
250, 82
               

               
Conread position:
               
101-508
               

               
Cow position:
               
chr23:6367763-6367369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 40
               

               
Conread position:
               
110-295
               

               
Cow position:
               
chr23:5786001-5785823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
110-555
               

               
Cow position:
               
chr23:2799731-2799281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
257, 29
               

               
Conread position:
               
112-362
               

               
Cow position:
               
chr23:8917525-8917762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
142, 43
               

               
Conread position:
               
115-540
               

               
Cow position:
               
chr23:5540297-5539913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
235, 29
               

               
Conread position:
               
117-486
               

               
Cow position:
               
chr23:21765066-21764705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 33
               

               
Conread position:
               
124-331
               

               
Cow position:
               
chr23:22105702-22105505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
124-380
               

               
Cow position:
               
chr23:39276038-39275784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
58, 34
               

               
Conread position:
               
124-381
               

               
Cow position:
               
chr23:16076021-16076266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
215, 37
               

               
Conread position:
               
125-307
               

               
Cow position:
               
chr23:32412056-32411880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
51, 19
               

               
Conread position:
               
126-555
               

               
Cow position:
               
chr23:9268721-9268303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 18
               

               
Conread position:
               
131-432
               

               
Cow position:
               
chr23:4329533-4329839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
26, 36
               

               
Conread position:
               
131-453
               

               
Cow position:
               
chr23:4104538-4104226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
16, 36
               

               
Conread position:
               
131-519
               

               
Cow position:
               
chr23:18402150-18402534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
18, 33
               

               
Conread position:
               
131-522
               

               
Cow position:
               
chr23:11045624-11045233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 31
               

               
Conread position:
               
131-543
               

               
Cow position:
               
chr23:14739589-14739175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
18, 34
               

               
Conread position:
               
131-555
               

               
Cow position:
               
chr23:13599477-13599061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 31
               

               
Conread position:
               
132-300
               

               
Cow position:
               
chr23:18605271-18605433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
132-301
               

               
Cow position:
               
chr23:17231282-17231122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
132-357
               

               
Cow position:
               
chr23:21439865-21440084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
170, 29
               

               
Conread position:
               
132-426
               

               
Cow position:
               
chr23:21502493-21502789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
110, 30
               

               
Conread position:
               
133-331
               

               
Cow position:
               
chr23:35368910-35369101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
136-514
               

               
Cow position:
               
chr23:5707123-5706756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
364, 21
               

               
Conread position:
               
136-524
               

               
Cow position:
               
chr23:29034448-29034060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 25
               

               
Conread position:
               
136-555
               

               
Cow position:
               
chr23:1923702-1924120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 123
               

               
Conread position:
               
137-337
               

               
Cow position:
               
chr23:1589720-1589524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
85, 7
               

               
Conread position:
               
138-417
               

               
Cow position:
               
chr23:3433781-3434053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
52, 24
               

               
Conread position:
               
139-462
               

               
Cow position:
               
chr23:2487860-2488173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
128, 103
               

               
Conread position:
               
141-332
               

               
Cow position:
               
chr23:3244340-3244523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
144-505
               

               
Cow position:
               
chr23:27544953-27544602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
206, 20
               

               
Conread position:
               
146-366
               

               
Cow position:
               
chr23:1403680-1403896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
17, 106
               

               
Conread position:
               
147-381
               

               
Cow position:
               
chr23:1876835-1876604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
203, 95
               

               
Conread position:
               
147-434
               

               
Cow position:
               
chr23:19774891-19774614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
51, 16
               

               
Conread position:
               
149-529
               

               
Cow position:
               
chr23:1720863-1721245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 15
               

               
Conread position:
               
150-555
               

               
Cow position:
               
chr23:10014652-10014261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
26, 92
               

               
Conread position:
               
151-337
               

               
Cow position:
               
chr23:348829-349012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
152, 11
               

               
Conread position:
               
151-516
               

               
Cow position:
               
chr23:16699923-16700284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 12
               

               
Conread position:
               
151-528
               

               
Cow position:
               
chr23:6592588-6592950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
199, 88
               

               
Conread position:
               
151-529
               

               
Cow position:
               
chr23:29458980-29459346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 11
               

               
Conread position:
               
153-337
               

               
Cow position:
               
chr23:5400779-5400604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
101, 48
               

               
Conread position:
               
158-356
               

               
Cow position:
               
chr23:4470387-4470582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
144, 79
               

               
Conread position:
               
162-336
               

               
Cow position:
               
chr23:3830092-3830261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
139, 14
               

               
Conread position:
               
162-425
               

               
Cow position:
               
chr23:35938454-35938190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
168, 77
               

               
Conread position:
               
163-358
               

               
Cow position:
               
chr23:5237312-5237512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
75, 181
               

               
Conread position:
               
163-555
               

               
Cow position:
               
chr23:40781437-40781041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
152, 75
               

               
Conread position:
               
164-485
               

               
Cow position:
               
chr23:22399512-22399190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
148, 66
               

               
Conread position:
               
164-553
               

               
Cow position:
               
chr23:11845382-11845005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
186, 25
               

               
Conread position:
               
164-553
               

               
Cow position:
               
chr23:25668985-25669355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
57, 25
               

               
Conread position:
               
167-536
               

               
Cow position:
               
chr23:17404942-17404587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
183, 26
               

               
Conread position:
               
167-553
               

               
Cow position:
               
chr23:24867413-24867017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 90
               

               
Conread position:
               
175-536
               

               
Cow position:
               
chr23:39806965-39806607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 60
               

               
Conread position:
               
184-536
               

               
Cow position:
               
chr23:1647703-1647364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
166, 25
               

               
Conread position:
               
190-465
               

               
Cow position:
               
chr23:19370994-19371262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
162, 50
               

               
Conread position:
               
190-505
               

               
Cow position:
               
chr23:36075731-36076051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
60, 21
               

               
Conread position:
               
193-555
               

               
Cow position:
               
chr23:16563916-16563555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 62
               

               
Conread position:
               
198-533
               

               
Cow position:
               
chr23:2055777-2055439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
220, 53
               

               
Conread position:
               
199-526
               

               
Cow position:
               
chr23:27563629-27563964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
66, 52
               

               
Conread position:
               
202-540
               

               
Cow position:
               
chr23:25358792-25358462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
147, 38
               

               
Conread position:
               
204-538
               

               
Cow position:
               
chr23:18322361-18322686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
146, 7
               

               
Conread position:
               
226-546
               

               
Cow position:
               
chr23:3918052-3918373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 29
               

               
Conread position:
               
232-555
               

               
Cow position:
               
chr23:39309071-39309401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
64, 27
               

               
Conread position:
               
236-540
               

               
Cow position:
               
chr23:16664535-16664819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
61, 15
               

               
Conread position:
               
241-555
               

               
Cow position:
               
chr23:9594800-9595116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
8, 14
               

               
Conread position:
               
255-555
               

               
Cow position:
               
chr23:14191573-14191265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 42
               

               
Conread position:
               
257-540
               

               
Cow position:
               
chr23:3208602-3208886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
241, 0
               

               
Conread position:
               
257-545
               

               
Cow position:
               
chr23:41285936-41285657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
54, 40
               

               
Conread position:
               
263-417
               

               
Cow position:
               
chr23:24809652-24809807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
40, 52
               

               
Conread position:
               
279-525
               

               
Cow position:
               
chr23:6179716-6179960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
59, 65
               

               
Conread position:
               
301-555
               

               
Cow position:
               
chr23:1690761-1690501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
135, 13
               

               
Conread position:
               
315-539
               

               
Cow position:
               
chr23:360955-361177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
35, 97
               

               
Conread position:
               
327-546
               

               
Cow position:
               
chr23:222017-221795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
23, 77
               

               
Conread position:
               
349-555
               

               
Cow position:
               
chr23:1321274-1321478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
150, 30
               

               
Conread position:
               
349-555
               

               
Cow position:
               
chr23:29824137-29824351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
31, 40
               
Show alignments to all cow chromosomes.