Cow genome map
| Conread name: | rpro40_a11.y1 |
| Conread position: | 12-519 |
| Cow position: | chr29:11562875-11562363 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 15 |
| Conread position: | 17-442 |
| Cow position: | chr29:5408886-5409318 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 298 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 16, 154 |
| Conread position: | 23-309 |
| Cow position: | chr29:38440501-38440209 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 197 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 29, 52 |
| Conread position: | 24-284 |
| Cow position: | chr29:9378878-9378622 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 40, 18 |
| Conread position: | 26-302 |
| Cow position: | chr29:33321584-33321318 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 44-227 |
| Cow position: | chr29:25981785-25981963 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 162, 26 |
| Conread position: | 44-240 |
| Cow position: | chr29:10818239-10818424 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 15, 70 |
| Conread position: | 45-241 |
| Cow position: | chr29:24660894-24660712 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 143 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 45-295 |
| Cow position: | chr29:3549823-3549577 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 47-348 |
| Cow position: | chr29:28840394-28840077 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 18, 229 |
| Conread position: | 47-524 |
| Cow position: | chr29:22162045-22162509 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 52 |
| Conread position: | 47-555 |
| Cow position: | chr29:5893063-5892560 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 50 |
| Conread position: | 48-328 |
| Cow position: | chr29:22166869-22167138 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 5, 86 |
| Conread position: | 49-362 |
| Cow position: | chr29:29923361-29923666 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 223 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 12, 80 |
| Conread position: | 50-301 |
| Cow position: | chr29:19910177-19909924 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 174 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 10, 28 |
| Conread position: | 50-311 |
| Cow position: | chr29:8163614-8163870 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 8, 27 |
| Conread position: | 51-239 |
| Cow position: | chr29:31080377-31080187 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 134 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 19, 128 |
| Conread position: | 51-257 |
| Cow position: | chr29:22335014-22335219 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 82, 17 |
| Conread position: | 51-279 |
| Cow position: | chr29:22729781-22729558 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 12, 104 |
| Conread position: | 51-295 |
| Cow position: | chr29:396614-396387 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 169 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 161, 81 |
| Conread position: | 51-295 |
| Cow position: | chr29:31934590-31934353 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 20, 82 |
| Conread position: | 51-358 |
| Cow position: | chr29:20243595-20243896 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 190, 17 |
| Conread position: | 51-497 |
| Cow position: | chr29:4520541-4520109 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 256, 19 |
| Conread position: | 51-529 |
| Cow position: | chr29:22613631-22613174 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 260, 17 |
| Conread position: | 51-535 |
| Cow position: | chr29:17462566-17463046 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 320 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 12, 93 |
| Conread position: | 51-555 |
| Cow position: | chr29:26017290-26017797 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 12 |
| Conread position: | 51-555 |
| Cow position: | chr29:43080391-43080898 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 334 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 28, 157 |
| Conread position: | 52-207 |
| Cow position: | chr29:4741178-4741332 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 52-232 |
| Cow position: | chr29:7414706-7414535 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 14, 39 |
| Conread position: | 52-236 |
| Cow position: | chr29:38732367-38732183 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 19, 112 |
| Conread position: | 52-238 |
| Cow position: | chr29:27961752-27961939 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 14, 127 |
| Conread position: | 52-239 |
| Cow position: | chr29:27929978-27929795 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 15, 94 |
| Conread position: | 52-240 |
| Cow position: | chr29:936412-936233 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 52-240 |
| Cow position: | chr29:17282272-17282094 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 52-242 |
| Cow position: | chr29:27997035-27997226 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 15, 126 |
| Conread position: | 52-259 |
| Cow position: | chr29:4440991-4441195 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 10, 110 |
| Conread position: | 52-263 |
| Cow position: | chr29:32215916-32215713 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 14, 68 |
| Conread position: | 52-264 |
| Cow position: | chr29:22705256-22705033 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 52-273 |
| Cow position: | chr29:12890886-12890681 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 52-292 |
| Cow position: | chr29:7290983-7290753 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 179 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 14, 47 |
| Conread position: | 52-295 |
| Cow position: | chr29:28420968-28420729 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 167 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 52-301 |
| Cow position: | chr29:28066691-28066461 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 173 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 52-301 |
| Cow position: | chr29:39038057-39038301 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 184 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 19, 100 |
| Conread position: | 52-378 |
| Cow position: | chr29:13028663-13028331 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 223 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 9, 197 |
| Conread position: | 52-395 |
| Cow position: | chr29:1008031-1007692 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 243 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 26, 90 |
| Conread position: | 52-468 |
| Cow position: | chr29:26275814-26275416 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 86 |
| Conread position: | 52-483 |
| Cow position: | chr29:6337862-6337450 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 294 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 18, 25 |
| Conread position: | 52-491 |
| Cow position: | chr29:28739842-28739408 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 275 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 15, 135 |
| Conread position: | 52-494 |
| Cow position: | chr29:1395784-1395382 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 298 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 24, 51 |
| Conread position: | 52-515 |
| Cow position: | chr29:19949520-19949065 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 101 |
| Conread position: | 52-516 |
| Cow position: | chr29:34773537-34773975 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 61 |
| Conread position: | 52-538 |
| Cow position: | chr29:42363809-42364284 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 18 |
| Conread position: | 52-549 |
| Cow position: | chr29:34359612-34360075 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 345 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 20, 90 |
| Conread position: | 52-554 |
| Cow position: | chr29:4874679-4875192 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 202, 78 |
| Conread position: | 52-555 |
| Cow position: | chr29:4121066-4120562 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 18 |
| Conread position: | 52-555 |
| Cow position: | chr29:4479955-4480464 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 191 |
| Conread position: | 52-555 |
| Cow position: | chr29:21196442-21196940 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 18 |
| Conread position: | 52-555 |
| Cow position: | chr29:35501449-35501935 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 74 |
| Conread position: | 53-194 |
| Cow position: | chr29:570634-570767 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 108 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 53-325 |
| Cow position: | chr29:23155444-23155174 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 86, 17 |
| Conread position: | 53-555 |
| Cow position: | chr29:9709907-9709409 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 83 |
| Conread position: | 55-240 |
| Cow position: | chr29:42798164-42797982 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 14, 101 |
| Conread position: | 55-248 |
| Cow position: | chr29:11894909-11894716 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 15, 94 |
| Conread position: | 55-286 |
| Cow position: | chr29:6686443-6686650 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 166 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 55-301 |
| Cow position: | chr29:17804741-17804502 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 16, 92 |
| Conread position: | 55-303 |
| Cow position: | chr29:31982029-31981797 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 55-311 |
| Cow position: | chr29:16290931-16290684 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 55-336 |
| Cow position: | chr29:23220278-23220566 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 20, 156 |
| Conread position: | 55-356 |
| Cow position: | chr29:20770554-20770258 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 210 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 12, 70 |
| Conread position: | 55-536 |
| Cow position: | chr29:27668445-27668910 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 322 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 8, 193 |
| Conread position: | 55-554 |
| Cow position: | chr29:39111115-39111594 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 91 |
| Conread position: | 55-555 |
| Cow position: | chr29:19756646-19756158 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 352 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 10, 42 |
| Conread position: | 56-308 |
| Cow position: | chr29:32894463-32894224 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 168 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 56-364 |
| Cow position: | chr29:21666293-21665994 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 221 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 293, 89 |
| Conread position: | 56-444 |
| Cow position: | chr29:41112681-41113030 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 271 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 11, 58 |
| Conread position: | 56-536 |
| Cow position: | chr29:12680367-12679886 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 113 |
| Conread position: | 57-222 |
| Cow position: | chr29:22776282-22776123 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 57-255 |
| Cow position: | chr29:26211259-26211063 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 92, 106 |
| Conread position: | 57-273 |
| Cow position: | chr29:15798157-15797948 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 57-300 |
| Cow position: | chr29:42630323-42630090 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 57-307 |
| Cow position: | chr29:20526956-20527200 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 57-309 |
| Cow position: | chr29:44991219-44991464 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 36, 101 |
| Conread position: | 57-337 |
| Cow position: | chr29:32656642-32656366 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 135, 106 |
| Conread position: | 57-443 |
| Cow position: | chr29:31674837-31674456 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 268 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 137, 100 |
| Conread position: | 57-453 |
| Cow position: | chr29:37618514-37618123 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 263 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 122, 91 |
| Conread position: | 57-455 |
| Cow position: | chr29:20910484-20910885 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 265 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 149, 124 |
| Conread position: | 57-505 |
| Cow position: | chr29:23845046-23844598 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 294 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 269, 120 |
| Conread position: | 57-520 |
| Cow position: | chr29:11397707-11398168 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 299 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 75, 193 |
| Conread position: | 57-524 |
| Cow position: | chr29:26334183-26334645 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 295 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 337, 91 |
| Conread position: | 57-527 |
| Cow position: | chr29:29769146-29769605 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 82 |
| Conread position: | 57-536 |
| Cow position: | chr29:2623271-2623748 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 323 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 12, 108 |
| Conread position: | 57-553 |
| Cow position: | chr29:23874668-23874168 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 325, 106 |
| Conread position: | 57-555 |
| Cow position: | chr29:2744064-2744562 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 249, 21 |
| Conread position: | 57-555 |
| Cow position: | chr29:16609956-16609448 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 62 |
| Conread position: | 57-555 |
| Cow position: | chr29:35458563-35459049 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 290, 161 |
| Conread position: | 58-234 |
| Cow position: | chr29:33143151-33143322 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 8, 19 |
| Conread position: | 58-245 |
| Cow position: | chr29:35189814-35189629 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 91, 105 |
| Conread position: | 58-249 |
| Cow position: | chr29:22576973-22577162 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 58-285 |
| Cow position: | chr29:16200271-16200494 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 91, 105 |
| Conread position: | 58-301 |
| Cow position: | chr29:22032441-22032673 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 144, 39 |
| Conread position: | 58-307 |
| Cow position: | chr29:4070825-4070590 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 58-321 |
| Cow position: | chr29:27911796-27911543 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 58-378 |
| Cow position: | chr29:27835521-27835214 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 58-465 |
| Cow position: | chr29:11434317-11433928 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 277 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 327, 52 |
| Conread position: | 58-465 |
| Cow position: | chr29:26259682-26259281 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 277 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 13, 75 |
| Conread position: | 58-518 |
| Cow position: | chr29:25737215-25737667 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 196, 18 |
| Conread position: | 58-528 |
| Cow position: | chr29:32799499-32799963 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 14 |
| Conread position: | 58-555 |
| Cow position: | chr29:732817-732336 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 56 |
| Conread position: | 58-555 |
| Cow position: | chr29:10058340-10058817 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 196, 10 |
| Conread position: | 59-240 |
| Cow position: | chr29:39639042-39638870 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 132 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 59-245 |
| Cow position: | chr29:26631252-26631063 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 90, 11 |
| Conread position: | 59-280 |
| Cow position: | chr29:19363913-19363700 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 176 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 10, 99 |
| Conread position: | 59-305 |
| Cow position: | chr29:25944091-25944339 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 90, 19 |
| Conread position: | 59-444 |
| Cow position: | chr29:25092308-25091939 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 243, 92 |
| Conread position: | 59-526 |
| Cow position: | chr29:40117768-40117314 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 11 |
| Conread position: | 59-535 |
| Cow position: | chr29:22068538-22069014 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 317 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 135, 17 |
| Conread position: | 59-536 |
| Cow position: | chr29:21682306-21682777 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 296 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 114, 158 |
| Conread position: | 59-555 |
| Cow position: | chr29:14112582-14112085 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 321 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 135, 17 |
| Conread position: | 60-329 |
| Cow position: | chr29:18449935-18450192 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 134, 106 |
| Conread position: | 60-418 |
| Cow position: | chr29:35084021-35084370 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 234 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 281, 10 |
| Conread position: | 60-555 |
| Cow position: | chr29:20626772-20626287 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 16 |
| Conread position: | 60-555 |
| Cow position: | chr29:26779080-26778601 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 73 |
| Conread position: | 61-232 |
| Cow position: | chr29:44981432-44981592 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 126 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 61-279 |
| Cow position: | chr29:32655891-32656102 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 155 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 9, 77 |
| Conread position: | 61-303 |
| Cow position: | chr29:24187862-24188099 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 113, 9 |
| Conread position: | 61-515 |
| Cow position: | chr29:44378205-44378665 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 311 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 82, 112 |
| Conread position: | 61-524 |
| Cow position: | chr29:17222617-17222152 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 9 |
| Conread position: | 61-526 |
| Cow position: | chr29:31929188-31928721 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 65 |
| Conread position: | 61-538 |
| Cow position: | chr29:1325648-1325171 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 97 |
| Conread position: | 61-538 |
| Cow position: | chr29:18878279-18878771 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 36 |
| Conread position: | 61-555 |
| Cow position: | chr29:17110155-17109678 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 287, 33 |
| Conread position: | 62-282 |
| Cow position: | chr29:36781109-36781317 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 163 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 62-380 |
| Cow position: | chr29:11612048-11611730 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 204 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 182, 121 |
| Conread position: | 62-483 |
| Cow position: | chr29:38581193-38580763 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 283 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 67, 177 |
| Conread position: | 62-488 |
| Cow position: | chr29:35677340-35677762 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 285 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 111, 84 |
| Conread position: | 62-555 |
| Cow position: | chr29:14501796-14501307 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 288, 119 |
| Conread position: | 63-194 |
| Cow position: | chr29:659481-659354 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 63-223 |
| Cow position: | chr29:40112579-40112425 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 63-252 |
| Cow position: | chr29:37990787-37990984 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 74, 185 |
| Conread position: | 63-269 |
| Cow position: | chr29:14577057-14576859 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 63-272 |
| Cow position: | chr29:43088506-43088308 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 63-287 |
| Cow position: | chr29:19176715-19176931 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 113, 63 |
| Conread position: | 63-295 |
| Cow position: | chr29:26540340-26540566 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 177 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 63-308 |
| Cow position: | chr29:22734906-22735145 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 176 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 86, 29 |
| Conread position: | 63-441 |
| Cow position: | chr29:17297338-17296961 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 102 |
| Conread position: | 63-443 |
| Cow position: | chr29:31944066-31943691 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 258 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 135, 10 |
| Conread position: | 63-448 |
| Cow position: | chr29:43099549-43099918 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 191, 65 |
| Conread position: | 63-524 |
| Cow position: | chr29:8926250-8926715 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 36 |
| Conread position: | 63-555 |
| Cow position: | chr29:19762463-19761985 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 372, 34 |
| Conread position: | 64-262 |
| Cow position: | chr29:34274175-34274376 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 32, 50 |
| Conread position: | 64-284 |
| Cow position: | chr29:21645516-21645303 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 157 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 72, 139 |
| Conread position: | 64-337 |
| Cow position: | chr29:44139046-44139311 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 201 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 233, 87 |
| Conread position: | 64-526 |
| Cow position: | chr29:34297371-34297823 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 304 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 7, 85 |
| Conread position: | 64-538 |
| Cow position: | chr29:5063342-5062862 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 285, 76 |
| Conread position: | 64-538 |
| Cow position: | chr29:26672700-26673173 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 197 |
| Conread position: | 64-554 |
| Cow position: | chr29:36531065-36530574 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 259, 87 |
| Conread position: | 65-255 |
| Cow position: | chr29:40350883-40351064 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 65-262 |
| Cow position: | chr29:7443869-7444057 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 140 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 65-277 |
| Cow position: | chr29:19125528-19125314 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 159 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 61, 179 |
| Conread position: | 65-300 |
| Cow position: | chr29:36357326-36357098 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 70, 85 |
| Conread position: | 65-308 |
| Cow position: | chr29:7125020-7124773 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 14, 120 |
| Conread position: | 65-346 |
| Cow position: | chr29:38979882-38980145 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 196 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 65-359 |
| Cow position: | chr29:7624363-7624088 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 238, 31 |
| Conread position: | 65-438 |
| Cow position: | chr29:22028763-22029106 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 254 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 202, 76 |
| Conread position: | 65-487 |
| Cow position: | chr29:31489522-31489103 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 276 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 71, 98 |
| Conread position: | 65-555 |
| Cow position: | chr29:10839137-10838660 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 72 |
| Conread position: | 65-555 |
| Cow position: | chr29:28195335-28195806 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 281, 76 |
| Conread position: | 66-555 |
| Cow position: | chr29:43328829-43328347 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 242, 46 |
| Conread position: | 67-389 |
| Cow position: | chr29:34358783-34359098 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 16 |
| Conread position: | 68-300 |
| Cow position: | chr29:9310798-9310569 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 43, 95 |
| Conread position: | 68-345 |
| Cow position: | chr29:40874223-40873936 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 53, 188 |
| Conread position: | 68-554 |
| Cow position: | chr29:24952882-24952397 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 77 |
| Conread position: | 69-283 |
| Cow position: | chr29:3293137-3292934 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 149 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 69-555 |
| Cow position: | chr29:40763502-40763961 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 343, 88 |
| Conread position: | 70-320 |
| Cow position: | chr29:38858019-38858263 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 169 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 71, 46 |
| Conread position: | 70-329 |
| Cow position: | chr29:30681510-30681769 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 187 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 61, 173 |
| Conread position: | 70-485 |
| Cow position: | chr29:30441132-30440711 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 282 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 81, 94 |
| Conread position: | 71-304 |
| Cow position: | chr29:1011401-1011615 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 71-505 |
| Cow position: | chr29:22714518-22714961 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 181 |
| Conread position: | 75-412 |
| Cow position: | chr29:18462366-18462696 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 229 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 222, 73 |
| Conread position: | 76-255 |
| Cow position: | chr29:25288732-25288912 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 56, 134 |
| Conread position: | 76-329 |
| Cow position: | chr29:43544418-43544659 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 173 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 99, 69 |
| Conread position: | 78-273 |
| Cow position: | chr29:15796669-15796482 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 71, 18 |
| Conread position: | 78-301 |
| Cow position: | chr29:32197879-32197665 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 78-306 |
| Cow position: | chr29:29324235-29324457 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 168 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 59, 130 |
| Conread position: | 78-337 |
| Cow position: | chr29:27846669-27846398 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 64, 85 |
| Conread position: | 79-349 |
| Cow position: | chr29:30548957-30548696 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 194 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 224, 17 |
| Conread position: | 82-294 |
| Cow position: | chr29:22723777-22723576 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 82-317 |
| Cow position: | chr29:23825031-23825260 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 180 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 221, 63 |
| Conread position: | 83-235 |
| Cow position: | chr29:41223344-41223196 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 84-380 |
| Cow position: | chr29:24046177-24045884 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 186 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 266, 97 |
| Conread position: | 97-555 |
| Cow position: | chr29:21443170-21443634 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 51 |
| Conread position: | 97-555 |
| Cow position: | chr29:45005459-45005906 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 24 |
| Conread position: | 98-337 |
| Cow position: | chr29:32176833-32176614 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 99-468 |
| Cow position: | chr29:9718611-9718970 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 258 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 204, 62 |
| Conread position: | 103-555 |
| Cow position: | chr29:29975199-29974753 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 247, 78 |
| Conread position: | 105-538 |
| Cow position: | chr29:28775305-28775724 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 285 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 244, 55 |
| Conread position: | 113-538 |
| Cow position: | chr29:7966395-7965983 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 292 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 174, 36 |
| Conread position: | 131-364 |
| Cow position: | chr29:18085704-18085477 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 158 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 172, 25 |
| Conread position: | 132-332 |
| Cow position: | chr29:21285492-21285299 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 142 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 132-428 |
| Cow position: | chr29:26559111-26559398 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 24, 106 |
| Conread position: | 132-555 |
| Cow position: | chr29:6844499-6844919 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 31 |
| Conread position: | 133-337 |
| Cow position: | chr29:38978661-38978464 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 133-482 |
| Cow position: | chr29:26653915-26654252 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 239 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 121, 25 |
| Conread position: | 133-537 |
| Cow position: | chr29:19339131-19338710 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 12 |
| Conread position: | 136-442 |
| Cow position: | chr29:23243749-23244051 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 171, 26 |
| Conread position: | 149-540 |
| Cow position: | chr29:26615600-26616001 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 96 |
| Conread position: | 149-555 |
| Cow position: | chr29:36217228-36216829 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 13 |
| Conread position: | 150-448 |
| Cow position: | chr29:5186378-5186671 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 216 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 158, 21 |
| Conread position: | 150-470 |
| Cow position: | chr29:11053745-11054053 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 223 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 176, 12 |
| Conread position: | 151-419 |
| Cow position: | chr29:29176503-29176761 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 185 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 197, 11 |
| Conread position: | 151-448 |
| Cow position: | chr29:28166108-28166390 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 194 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 153-551 |
| Cow position: | chr29:17607527-17607130 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 197, 9 |
| Conread position: | 162-303 |
| Cow position: | chr29:742545-742683 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 162-408 |
| Cow position: | chr29:4002996-4002759 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 174 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 73, 96 |
| Conread position: | 162-436 |
| Cow position: | chr29:17154882-17154602 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 132, 72 |
| Conread position: | 162-488 |
| Cow position: | chr29:28446152-28446477 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 239 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 145, 48 |
| Conread position: | 162-517 |
| Cow position: | chr29:20903186-20903537 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 89 |
| Conread position: | 162-555 |
| Cow position: | chr29:41811486-41811864 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 337, 81 |
| Conread position: | 163-389 |
| Cow position: | chr29:12625873-12626097 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 186, 79 |
| Conread position: | 164-337 |
| Cow position: | chr29:18012660-18012489 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 138, 87 |
| Conread position: | 164-374 |
| Cow position: | chr29:24578965-24578755 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 147, 87 |
| Conread position: | 164-410 |
| Cow position: | chr29:27329994-27329753 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 184, 18 |
| Conread position: | 164-443 |
| Cow position: | chr29:27826622-27826353 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 196 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 43, 48 |
| Conread position: | 165-555 |
| Cow position: | chr29:39567783-39567396 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 184, 75 |
| Conread position: | 167-528 |
| Cow position: | chr29:5098667-5099022 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 256 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 183, 90 |
| Conread position: | 169-517 |
| Cow position: | chr29:23983858-23984213 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 73 |
| Conread position: | 186-545 |
| Cow position: | chr29:40166324-40165967 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 73 |
| Conread position: | 190-555 |
| Cow position: | chr29:17668563-17668216 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 242 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 246, 50 |
| Conread position: | 193-505 |
| Cow position: | chr29:24103468-24103782 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 53 |
| Conread position: | 196-507 |
| Cow position: | chr29:26986999-26986704 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 211 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 97, 18 |
| Conread position: | 199-331 |
| Cow position: | chr29:31477046-31477176 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 47, 42 |
| Conread position: | 200-426 |
| Cow position: | chr29:29314586-29314810 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 165 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 54, 42 |
| Conread position: | 200-491 |
| Cow position: | chr29:463588-463874 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 202 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 118, 50 |
| Conread position: | 200-555 |
| Cow position: | chr29:2071505-2071858 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 40 |
| Conread position: | 215-555 |
| Cow position: | chr29:11135845-11136178 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 220, 27 |
| Conread position: | 225-522 |
| Cow position: | chr29:31594086-31594369 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 223 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 125, 26 |
| Conread position: | 226-528 |
| Cow position: | chr29:42849265-42848967 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 219 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 63, 23 |
| Conread position: | 226-555 |
| Cow position: | chr29:17067-17394 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 239 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 92, 15 |
| Conread position: | 226-555 |
| Cow position: | chr29:4328465-4328144 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 242 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 16, 77 |
| Conread position: | 226-555 |
| Cow position: | chr29:6774957-6775280 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 234 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 77, 16 |
| Conread position: | 250-529 |
| Cow position: | chr29:43311773-43312056 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 100, 77 |
| Conread position: | 254-555 |
| Cow position: | chr29:10456547-10456842 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 222 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 96, 42 |
| Conread position: | 265-465 |
| Cow position: | chr29:10818430-10818631 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 83, 32 |
| Conread position: | 299-555 |
| Cow position: | chr29:19125316-19125070 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 51, 166 |
| Conread position: | 341-538 |
| Cow position: | chr29:26285104-26285301 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 140 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 10, 43 |
Show alignments to all cow chromosomes.