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Cow genome map

           
Conread name:
           
rpro40_a11.y1
        

               
Conread position:
               
12-443
               

               
Cow position:
               
chr4:32458612-32459040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
47, 30
               

               
Conread position:
               
27-434
               

               
Cow position:
               
chr4:64191947-64192359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
43, 15
               

               
Conread position:
               
40-233
               

               
Cow position:
               
chr4:30944173-30943982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
22, 108
               

               
Conread position:
               
42-295
               

               
Cow position:
               
chr4:386179-386423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
16, 36
               

               
Conread position:
               
42-555
               

               
Cow position:
               
chr4:66172582-66173090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 21
               

               
Conread position:
               
44-308
               

               
Cow position:
               
chr4:60141312-60141561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
6, 49
               

               
Conread position:
               
44-329
               

               
Cow position:
               
chr4:49800902-49800630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
105, 26
               

               
Conread position:
               
44-526
               

               
Cow position:
               
chr4:29291718-29291263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
306, 97
               

               
Conread position:
               
44-527
               

               
Cow position:
               
chr4:34641512-34641994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 19
               

               
Conread position:
               
45-193
               

               
Cow position:
               
chr4:6202194-6202336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
45-553
               

               
Cow position:
               
chr4:62472286-62471774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 31
               

               
Conread position:
               
46-536
               

               
Cow position:
               
chr4:28771862-28772341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
249, 22
               

               
Conread position:
               
46-555
               

               
Cow position:
               
chr4:40414415-40414927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 112
               

               
Conread position:
               
47-285
               

               
Cow position:
               
chr4:49212541-49212761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
47-306
               

               
Cow position:
               
chr4:21161316-21161063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
20, 95
               

               
Conread position:
               
47-337
               

               
Cow position:
               
chr4:46566261-46566545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
23, 52
               

               
Conread position:
               
47-462
               

               
Cow position:
               
chr4:17774156-17774547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 70
               

               
Conread position:
               
47-540
               

               
Cow position:
               
chr4:41867659-41867166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 152
               

               
Conread position:
               
47-553
               

               
Cow position:
               
chr4:14153323-14152779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 21
               

               
Conread position:
               
48-265
               

               
Cow position:
               
chr4:61887848-61887635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
37, 22
               

               
Conread position:
               
48-289
               

               
Cow position:
               
chr4:21506757-21506981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
34, 7
               

               
Conread position:
               
48-305
               

               
Cow position:
               
chr4:42231827-42232064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
48-380
               

               
Cow position:
               
chr4:7043608-7043938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
17, 112
               

               
Conread position:
               
49-224
               

               
Cow position:
               
chr4:42608950-42608776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
15, 105
               

               
Conread position:
               
49-313
               

               
Cow position:
               
chr4:38349985-38350249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
8, 102
               

               
Conread position:
               
49-378
               

               
Cow position:
               
chr4:13026511-13026189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
56, 32
               

               
Conread position:
               
49-412
               

               
Cow position:
               
chr4:48409079-48409413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
238, 21
               

               
Conread position:
               
49-505
               

               
Cow position:
               
chr4:3837478-3837038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
5, 73
               

               
Conread position:
               
50-185
               

               
Cow position:
               
chr4:16798768-16798896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
9, 20
               

               
Conread position:
               
50-314
               

               
Cow position:
               
chr4:65463307-65463550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
50-485
               

               
Cow position:
               
chr4:59277265-59277700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 180
               

               
Conread position:
               
51-218
               

               
Cow position:
               
chr4:53941588-53941754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
90, 118
               

               
Conread position:
               
51-252
               

               
Cow position:
               
chr4:2713653-2713852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
190, 19
               

               
Conread position:
               
51-252
               

               
Cow position:
               
chr4:56236350-56236543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
51-268
               

               
Cow position:
               
chr4:25929412-25929207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
187, 11
               

               
Conread position:
               
51-294
               

               
Cow position:
               
chr4:44903487-44903264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
51-302
               

               
Cow position:
               
chr4:31178028-31177788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
9, 27
               

               
Conread position:
               
51-308
               

               
Cow position:
               
chr4:2774930-2774669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
14, 114
               

               
Conread position:
               
51-337
               

               
Cow position:
               
chr4:8182431-8182711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 17
               

               
Conread position:
               
51-380
               

               
Cow position:
               
chr4:16513321-16513635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
15, 25
               

               
Conread position:
               
51-411
               

               
Cow position:
               
chr4:54927225-54927586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 196
               

               
Conread position:
               
51-435
               

               
Cow position:
               
chr4:41370738-41371110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
299, 11
               

               
Conread position:
               
51-464
               

               
Cow position:
               
chr4:68806210-68805828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
18, 83
               

               
Conread position:
               
51-493
               

               
Cow position:
               
chr4:36290829-36290379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 83
               

               
Conread position:
               
51-520
               

               
Cow position:
               
chr4:47731069-47730604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 138
               

               
Conread position:
               
51-524
               

               
Cow position:
               
chr4:43909970-43909490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
104, 96
               

               
Conread position:
               
51-549
               

               
Cow position:
               
chr4:59785525-59785029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 86
               

               
Conread position:
               
51-554
               

               
Cow position:
               
chr4:33096763-33097254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 121
               

               
Conread position:
               
51-555
               

               
Cow position:
               
chr4:4084252-4084740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
299, 82
               

               
Conread position:
               
51-555
               

               
Cow position:
               
chr4:7430517-7430026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 53
               

               
Conread position:
               
51-555
               

               
Cow position:
               
chr4:12591017-12591507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
299, 11
               

               
Conread position:
               
51-555
               

               
Cow position:
               
chr4:65919822-65919326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 21
               

               
Conread position:
               
52-157
               

               
Cow position:
               
chr4:64336074-64336179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
106
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
52-206
               

               
Cow position:
               
chr4:34544510-34544361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
13, 73
               

               
Conread position:
               
52-227
               

               
Cow position:
               
chr4:62820850-62821022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
15, 108
               

               
Conread position:
               
52-232
               

               
Cow position:
               
chr4:56756061-56755883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
99, 24
               

               
Conread position:
               
52-245
               

               
Cow position:
               
chr4:36876652-36876841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
63, 94
               

               
Conread position:
               
52-245
               

               
Cow position:
               
chr4:47230793-47230981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
52-245
               

               
Cow position:
               
chr4:47283808-47283996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
52-252
               

               
Cow position:
               
chr4:5250395-5250196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
52-252
               

               
Cow position:
               
chr4:42044770-42044966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
19, 34
               

               
Conread position:
               
52-261
               

               
Cow position:
               
chr4:27657175-27656975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
190, 18
               

               
Conread position:
               
52-277
               

               
Cow position:
               
chr4:8083601-8083812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
11, 82
               

               
Conread position:
               
52-279
               

               
Cow position:
               
chr4:19496707-19496479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
17, 116
               

               
Conread position:
               
52-284
               

               
Cow position:
               
chr4:60363554-60363330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
52-286
               

               
Cow position:
               
chr4:19539028-19539259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
97, 32
               

               
Conread position:
               
52-293
               

               
Cow position:
               
chr4:17051076-17051316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
12, 78
               

               
Conread position:
               
52-295
               

               
Cow position:
               
chr4:32562035-32561798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
127, 24
               

               
Conread position:
               
52-301
               

               
Cow position:
               
chr4:38209769-38210012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 101
               

               
Conread position:
               
52-310
               

               
Cow position:
               
chr4:12442110-12441850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
74, 17
               

               
Conread position:
               
52-310
               

               
Cow position:
               
chr4:13241841-13241580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
74, 16
               

               
Conread position:
               
52-327
               

               
Cow position:
               
chr4:38822115-38822379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
127, 18
               

               
Conread position:
               
52-329
               

               
Cow position:
               
chr4:47038972-47038703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
97, 24
               

               
Conread position:
               
52-337
               

               
Cow position:
               
chr4:69290533-69290810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
12, 97
               

               
Conread position:
               
52-362
               

               
Cow position:
               
chr4:10558739-10558436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
269, 11
               

               
Conread position:
               
52-380
               

               
Cow position:
               
chr4:38946421-38946093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
213, 11
               

               
Conread position:
               
52-417
               

               
Cow position:
               
chr4:19119225-19118854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 106
               

               
Conread position:
               
52-423
               

               
Cow position:
               
chr4:48104361-48104731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
99, 80
               

               
Conread position:
               
52-433
               

               
Cow position:
               
chr4:21088665-21089038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
84, 24
               

               
Conread position:
               
52-440
               

               
Cow position:
               
chr4:52823194-52823579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
18, 96
               

               
Conread position:
               
52-462
               

               
Cow position:
               
chr4:31505815-31506228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 24
               

               
Conread position:
               
52-463
               

               
Cow position:
               
chr4:43515927-43515524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
66, 178
               

               
Conread position:
               
52-520
               

               
Cow position:
               
chr4:49794852-49794421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
298, 10
               

               
Conread position:
               
52-522
               

               
Cow position:
               
chr4:3283248-3283709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 95
               

               
Conread position:
               
52-527
               

               
Cow position:
               
chr4:3341161-3340686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 47
               

               
Conread position:
               
52-527
               

               
Cow position:
               
chr4:35982204-35981724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 108
               

               
Conread position:
               
52-528
               

               
Cow position:
               
chr4:65825618-65826121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 82
               

               
Conread position:
               
52-535
               

               
Cow position:
               
chr4:10968193-10968659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
249, 48
               

               
Conread position:
               
52-538
               

               
Cow position:
               
chr4:15439789-15439321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
97, 26
               

               
Conread position:
               
52-540
               

               
Cow position:
               
chr4:19542354-19541846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 125
               

               
Conread position:
               
52-553
               

               
Cow position:
               
chr4:4084904-4085427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 89
               

               
Conread position:
               
52-555
               

               
Cow position:
               
chr4:23646663-23647139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 96
               

               
Conread position:
               
52-555
               

               
Cow position:
               
chr4:34165786-34166261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
245, 23
               

               
Conread position:
               
52-555
               

               
Cow position:
               
chr4:58248613-58248115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 114
               

               
Conread position:
               
52-555
               

               
Cow position:
               
chr4:59871684-59871209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 24
               

               
Conread position:
               
53-231
               

               
Cow position:
               
chr4:2770276-2770103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
12, 94
               

               
Conread position:
               
53-238
               

               
Cow position:
               
chr4:46656338-46656152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
17, 111
               

               
Conread position:
               
53-254
               

               
Cow position:
               
chr4:47048316-47048124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
155, 17
               

               
Conread position:
               
53-305
               

               
Cow position:
               
chr4:16221669-16221916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
54, 17
               

               
Conread position:
               
53-362
               

               
Cow position:
               
chr4:23880468-23880756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
113, 92
               

               
Conread position:
               
53-412
               

               
Cow position:
               
chr4:54524128-54524477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
77, 17
               

               
Conread position:
               
53-465
               

               
Cow position:
               
chr4:85898-85495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
13, 83
               

               
Conread position:
               
53-522
               

               
Cow position:
               
chr4:62983357-62983813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 9
               

               
Conread position:
               
53-523
               

               
Cow position:
               
chr4:1985853-1985388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
96, 17
               

               
Conread position:
               
53-529
               

               
Cow position:
               
chr4:43894608-43895070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
86, 15
               

               
Conread position:
               
53-555
               

               
Cow position:
               
chr4:56239662-56240142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
297, 17
               

               
Conread position:
               
54-196
               

               
Cow position:
               
chr4:19496777-19496916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
77, 91
               

               
Conread position:
               
54-255
               

               
Cow position:
               
chr4:42373953-42374150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
54-469
               

               
Cow position:
               
chr4:13344738-13344337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
398, 86
               

               
Conread position:
               
54-553
               

               
Cow position:
               
chr4:275646-275171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
296, 96
               

               
Conread position:
               
54-555
               

               
Cow position:
               
chr4:51851414-51850899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 97
               

               
Conread position:
               
55-216
               

               
Cow position:
               
chr4:10785939-10786095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
55-232
               

               
Cow position:
               
chr4:20153354-20153520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
55-239
               

               
Cow position:
               
chr4:5132546-5132355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
76, 37
               

               
Conread position:
               
55-246
               

               
Cow position:
               
chr4:22215311-22215496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
15, 86
               

               
Conread position:
               
55-246
               

               
Cow position:
               
chr4:39007698-39007518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
177, 41
               

               
Conread position:
               
55-256
               

               
Cow position:
               
chr4:50494980-50494776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
55-269
               

               
Cow position:
               
chr4:17790095-17790297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
55-269
               

               
Cow position:
               
chr4:63078427-63078217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
55-271
               

               
Cow position:
               
chr4:561834-561625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
12, 98
               

               
Conread position:
               
55-286
               

               
Cow position:
               
chr4:18098860-18099084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
55-287
               

               
Cow position:
               
chr4:60527383-60527157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
10, 58
               

               
Conread position:
               
55-293
               

               
Cow position:
               
chr4:50687664-50687890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
55-311
               

               
Cow position:
               
chr4:19431490-19431744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
91, 15
               

               
Conread position:
               
55-337
               

               
Cow position:
               
chr4:37991792-37991526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
10, 79
               

               
Conread position:
               
55-360
               

               
Cow position:
               
chr4:19573490-19573192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
86, 114
               

               
Conread position:
               
55-398
               

               
Cow position:
               
chr4:38156892-38157223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 76
               

               
Conread position:
               
55-465
               

               
Cow position:
               
chr4:13284584-13284176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
96, 21
               

               
Conread position:
               
55-467
               

               
Cow position:
               
chr4:28839813-28839423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 79
               

               
Conread position:
               
55-538
               

               
Cow position:
               
chr4:1015272-1014791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 106
               

               
Conread position:
               
55-538
               

               
Cow position:
               
chr4:51899222-51898726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 206
               

               
Conread position:
               
55-546
               

               
Cow position:
               
chr4:3688130-3687641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 96
               

               
Conread position:
               
55-555
               

               
Cow position:
               
chr4:10915630-10916133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 59
               

               
Conread position:
               
55-555
               

               
Cow position:
               
chr4:22101060-22101563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
94, 113
               

               
Conread position:
               
55-555
               

               
Cow position:
               
chr4:31023651-31023147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 116
               

               
Conread position:
               
56-224
               

               
Cow position:
               
chr4:12908568-12908410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
56-237
               

               
Cow position:
               
chr4:54785730-54785905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
42, 89
               

               
Conread position:
               
56-238
               

               
Cow position:
               
chr4:13194157-13193987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
56-260
               

               
Cow position:
               
chr4:25802894-25802691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
56-269
               

               
Cow position:
               
chr4:56410545-56410340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
56-286
               

               
Cow position:
               
chr4:27521759-27521531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
89, 14
               

               
Conread position:
               
56-294
               

               
Cow position:
               
chr4:54390814-54391048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
92, 104
               

               
Conread position:
               
56-303
               

               
Cow position:
               
chr4:47305280-47305038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
113, 14
               

               
Conread position:
               
56-309
               

               
Cow position:
               
chr4:68590969-68590733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
56-320
               

               
Cow position:
               
chr4:65173303-65173047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
9, 77
               

               
Conread position:
               
56-358
               

               
Cow position:
               
chr4:60719292-60719008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
267, 41
               

               
Conread position:
               
56-434
               

               
Cow position:
               
chr4:20147385-20147016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
294, 92
               

               
Conread position:
               
56-520
               

               
Cow position:
               
chr4:27665217-27664747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
95, 123
               

               
Conread position:
               
56-528
               

               
Cow position:
               
chr4:19700307-19699833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 114
               

               
Conread position:
               
56-529
               

               
Cow position:
               
chr4:19745070-19744622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 89
               

               
Conread position:
               
56-538
               

               
Cow position:
               
chr4:51728272-51727807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
294, 12
               

               
Conread position:
               
56-554
               

               
Cow position:
               
chr4:54191303-54190812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 65
               

               
Conread position:
               
56-555
               

               
Cow position:
               
chr4:11187654-11187159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 94
               

               
Conread position:
               
56-555
               

               
Cow position:
               
chr4:22073117-22073607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 186
               

               
Conread position:
               
56-555
               

               
Cow position:
               
chr4:36841462-36840984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 28
               

               
Conread position:
               
57-292
               

               
Cow position:
               
chr4:19333580-19333358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
57-332
               

               
Cow position:
               
chr4:17851063-17851319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
57-337
               

               
Cow position:
               
chr4:19199084-19199362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
92, 106
               

               
Conread position:
               
57-359
               

               
Cow position:
               
chr4:32693987-32693690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
19, 11
               

               
Conread position:
               
57-372
               

               
Cow position:
               
chr4:46136948-46136644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
284, 99
               

               
Conread position:
               
57-430
               

               
Cow position:
               
chr4:19500886-19501249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
14, 59
               

               
Conread position:
               
57-468
               

               
Cow position:
               
chr4:2885347-2885742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
293, 63
               

               
Conread position:
               
57-516
               

               
Cow position:
               
chr4:12676994-12676559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
293, 75
               

               
Conread position:
               
57-554
               

               
Cow position:
               
chr4:17832695-17833200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 109
               

               
Conread position:
               
57-555
               

               
Cow position:
               
chr4:7297-7794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
293, 124
               

               
Conread position:
               
57-555
               

               
Cow position:
               
chr4:13668419-13668909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 106
               

               
Conread position:
               
58-231
               

               
Cow position:
               
chr4:51617798-51617969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
58-255
               

               
Cow position:
               
chr4:39010251-39010055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
58-263
               

               
Cow position:
               
chr4:3519615-3519419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
58-272
               

               
Cow position:
               
chr4:30691201-30690992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
8, 88
               

               
Conread position:
               
58-279
               

               
Cow position:
               
chr4:29317870-29318091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
91, 30
               

               
Conread position:
               
58-320
               

               
Cow position:
               
chr4:46435532-46435268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
91, 199
               

               
Conread position:
               
58-327
               

               
Cow position:
               
chr4:44772840-44773105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
21, 106
               

               
Conread position:
               
58-378
               

               
Cow position:
               
chr4:37732281-37732596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
187, 105
               

               
Conread position:
               
58-380
               

               
Cow position:
               
chr4:45636370-45636049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
41, 107
               

               
Conread position:
               
58-424
               

               
Cow position:
               
chr4:47262734-47262373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
292, 18
               

               
Conread position:
               
58-434
               

               
Cow position:
               
chr4:27632639-27632284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
292, 39
               

               
Conread position:
               
58-465
               

               
Cow position:
               
chr4:51769303-51768912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
74, 35
               

               
Conread position:
               
58-498
               

               
Cow position:
               
chr4:13693476-13693911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 85
               

               
Conread position:
               
58-530
               

               
Cow position:
               
chr4:23846857-23847319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
292, 12
               

               
Conread position:
               
58-550
               

               
Cow position:
               
chr4:30974533-30974046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 116
               

               
Conread position:
               
58-555
               

               
Cow position:
               
chr4:22138019-22138531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 12
               

               
Conread position:
               
59-236
               

               
Cow position:
               
chr4:56395713-56395537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
59-252
               

               
Cow position:
               
chr4:58045435-58045626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
90, 104
               

               
Conread position:
               
59-255
               

               
Cow position:
               
chr4:30769229-30769041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
59-284
               

               
Cow position:
               
chr4:40995931-40995711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
90, 104
               

               
Conread position:
               
59-305
               

               
Cow position:
               
chr4:45874266-45874506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
90, 38
               

               
Conread position:
               
59-340
               

               
Cow position:
               
chr4:26333004-26333275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
135, 17
               

               
Conread position:
               
59-340
               

               
Cow position:
               
chr4:26335171-26335442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
135, 17
               

               
Conread position:
               
59-438
               

               
Cow position:
               
chr4:45685650-45685296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
291, 67
               

               
Conread position:
               
59-455
               

               
Cow position:
               
chr4:46393638-46393249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
291, 122
               

               
Conread position:
               
59-464
               

               
Cow position:
               
chr4:38944062-38944464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
252, 17
               

               
Conread position:
               
59-526
               

               
Cow position:
               
chr4:19315810-19316261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
291, 85
               

               
Conread position:
               
59-555
               

               
Cow position:
               
chr4:9137483-9136981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
90, 121
               

               
Conread position:
               
59-555
               

               
Cow position:
               
chr4:68076343-68076824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
291, 17
               

               
Conread position:
               
60-250
               

               
Cow position:
               
chr4:33389057-33388867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
89, 10
               

               
Conread position:
               
60-287
               

               
Cow position:
               
chr4:43916489-43916265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
37, 101
               

               
Conread position:
               
60-555
               

               
Cow position:
               
chr4:12004411-12003927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 13
               

               
Conread position:
               
61-234
               

               
Cow position:
               
chr4:23925181-23925358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
75, 9
               

               
Conread position:
               
61-258
               

               
Cow position:
               
chr4:45964085-45963886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
78, 102
               

               
Conread position:
               
61-295
               

               
Cow position:
               
chr4:5728025-5727813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
161, 9
               

               
Conread position:
               
61-295
               

               
Cow position:
               
chr4:44854092-44854321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
61-300
               

               
Cow position:
               
chr4:26959772-26960005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
61-300
               

               
Cow position:
               
chr4:45588236-45588474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
133, 13
               

               
Conread position:
               
61-315
               

               
Cow position:
               
chr4:19578577-19578340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
160, 9
               

               
Conread position:
               
61-472
               

               
Cow position:
               
chr4:1026041-1026436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 37
               

               
Conread position:
               
61-505
               

               
Cow position:
               
chr4:12127445-12127882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
258, 9
               

               
Conread position:
               
61-528
               

               
Cow position:
               
chr4:25197297-25197763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
221, 8
               

               
Conread position:
               
61-553
               

               
Cow position:
               
chr4:19435444-19434967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
288, 33
               

               
Conread position:
               
61-555
               

               
Cow position:
               
chr4:23450895-23451392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 102
               

               
Conread position:
               
62-232
               

               
Cow position:
               
chr4:39569393-39569232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
10, 73
               

               
Conread position:
               
62-254
               

               
Cow position:
               
chr4:22071478-22071665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
62-255
               

               
Cow position:
               
chr4:35974561-35974368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
87, 122
               

               
Conread position:
               
62-301
               

               
Cow position:
               
chr4:46883473-46883711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
183, 101
               

               
Conread position:
               
62-329
               

               
Cow position:
               
chr4:66380142-66380406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
192, 83
               

               
Conread position:
               
62-510
               

               
Cow position:
               
chr4:4186311-4185876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 22
               

               
Conread position:
               
62-537
               

               
Cow position:
               
chr4:21065219-21064764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
254, 71
               

               
Conread position:
               
62-540
               

               
Cow position:
               
chr4:52748268-52748736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 49
               

               
Conread position:
               
62-554
               

               
Cow position:
               
chr4:15905300-15904806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 101
               

               
Conread position:
               
62-555
               

               
Cow position:
               
chr4:59055677-59056135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
240, 35
               

               
Conread position:
               
63-170
               

               
Cow position:
               
chr4:33151678-33151572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
63-236
               

               
Cow position:
               
chr4:38940749-38940918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
63-238
               

               
Cow position:
               
chr4:62794163-62794341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
63, 103
               

               
Conread position:
               
63-243
               

               
Cow position:
               
chr4:51026544-51026370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
152, 88
               

               
Conread position:
               
63-245
               

               
Cow position:
               
chr4:34919081-34919254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
63-249
               

               
Cow position:
               
chr4:28854083-28854264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
169, 25
               

               
Conread position:
               
63-278
               

               
Cow position:
               
chr4:69497306-69497101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
63-283
               

               
Cow position:
               
chr4:67393289-67393072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
7, 101
               

               
Conread position:
               
63-295
               

               
Cow position:
               
chr4:12048072-12047841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
13, 35
               

               
Conread position:
               
63-306
               

               
Cow position:
               
chr4:69169842-69169604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
88, 57
               

               
Conread position:
               
63-309
               

               
Cow position:
               
chr4:35638713-35638949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
230, 21
               

               
Conread position:
               
63-314
               

               
Cow position:
               
chr4:11969647-11969407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
63-319
               

               
Cow position:
               
chr4:18952172-18951916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
9, 90
               

               
Conread position:
               
63-403
               

               
Cow position:
               
chr4:21874371-21874036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 98
               

               
Conread position:
               
63-468
               

               
Cow position:
               
chr4:34022393-34022785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
248, 66
               

               
Conread position:
               
63-482
               

               
Cow position:
               
chr4:38935551-38935141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
248, 33
               

               
Conread position:
               
63-483
               

               
Cow position:
               
chr4:19407798-19408218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 54
               

               
Conread position:
               
63-505
               

               
Cow position:
               
chr4:26659493-26659066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 88
               

               
Conread position:
               
63-520
               

               
Cow position:
               
chr4:54455153-54455598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 98
               

               
Conread position:
               
63-525
               

               
Cow position:
               
chr4:66547570-66548016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 102
               

               
Conread position:
               
63-536
               

               
Cow position:
               
chr4:44613198-44612729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
285, 100
               

               
Conread position:
               
63-537
               

               
Cow position:
               
chr4:3388734-3388277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
116, 13
               

               
Conread position:
               
63-539
               

               
Cow position:
               
chr4:49629679-49629220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
86, 65
               

               
Conread position:
               
63-544
               

               
Cow position:
               
chr4:46061141-46060665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 120
               

               
Conread position:
               
63-553
               

               
Cow position:
               
chr4:21391626-21392095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 27
               

               
Conread position:
               
63-553
               

               
Cow position:
               
chr4:68234156-68233683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 33
               

               
Conread position:
               
63-555
               

               
Cow position:
               
chr4:11871719-11872208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 14
               

               
Conread position:
               
63-555
               

               
Cow position:
               
chr4:19597139-19597609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
287, 69
               

               
Conread position:
               
63-555
               

               
Cow position:
               
chr4:22009869-22010354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
234, 52
               

               
Conread position:
               
63-555
               

               
Cow position:
               
chr4:31136948-31136457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 70
               

               
Conread position:
               
64-284
               

               
Cow position:
               
chr4:27699232-27699012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
68, 104
               

               
Conread position:
               
64-295
               

               
Cow position:
               
chr4:23656164-23655943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
7, 31
               

               
Conread position:
               
64-425
               

               
Cow position:
               
chr4:68569452-68569813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
157, 119
               

               
Conread position:
               
64-443
               

               
Cow position:
               
chr4:45076887-45077247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
64-553
               

               
Cow position:
               
chr4:48152179-48152663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 27
               

               
Conread position:
               
64-553
               

               
Cow position:
               
chr4:49158600-49159071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
85, 68
               

               
Conread position:
               
65-218
               

               
Cow position:
               
chr4:19463739-19463587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
81, 98
               

               
Conread position:
               
65-255
               

               
Cow position:
               
chr4:51083149-51083332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
37, 81
               

               
Conread position:
               
65-285
               

               
Cow position:
               
chr4:69305826-69305606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
38, 93
               

               
Conread position:
               
65-295
               

               
Cow position:
               
chr4:10472406-10472158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
65, 204
               

               
Conread position:
               
65-295
               

               
Cow position:
               
chr4:46404720-46404935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
65-309
               

               
Cow position:
               
chr4:59001947-59002184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
65-312
               

               
Cow position:
               
chr4:33181735-33181496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
65-331
               

               
Cow position:
               
chr4:34510020-34509773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
241, 31
               

               
Conread position:
               
65-530
               

               
Cow position:
               
chr4:34631098-34630634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 179
               

               
Conread position:
               
65-536
               

               
Cow position:
               
chr4:27530303-27529839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 33
               

               
Conread position:
               
65-554
               

               
Cow position:
               
chr4:21531449-21531927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 97
               

               
Conread position:
               
65-555
               

               
Cow position:
               
chr4:33970714-33971193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 11
               

               
Conread position:
               
65-555
               

               
Cow position:
               
chr4:53134788-53134315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 66
               

               
Conread position:
               
66-555
               

               
Cow position:
               
chr4:4318964-4319438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 66
               

               
Conread position:
               
66-555
               

               
Cow position:
               
chr4:9444492-9444985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 98
               

               
Conread position:
               
66-555
               

               
Cow position:
               
chr4:48486186-48485697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 80
               

               
Conread position:
               
67-555
               

               
Cow position:
               
chr4:46383177-46383667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
54, 9
               

               
Conread position:
               
68-218
               

               
Cow position:
               
chr4:60678166-60678019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
11, 77
               

               
Conread position:
               
68-240
               

               
Cow position:
               
chr4:22331308-22331145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
68-329
               

               
Cow position:
               
chr4:26012600-26012333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
64, 149
               

               
Conread position:
               
68-329
               

               
Cow position:
               
chr4:26830906-26830639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
64, 149
               

               
Conread position:
               
68-357
               

               
Cow position:
               
chr4:19102688-19102977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
70, 97
               

               
Conread position:
               
68-393
               

               
Cow position:
               
chr4:46494489-46494167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
165, 32
               

               
Conread position:
               
68-398
               

               
Cow position:
               
chr4:52831827-52832151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 92
               

               
Conread position:
               
68-412
               

               
Cow position:
               
chr4:36577423-36577777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
83, 107
               

               
Conread position:
               
68-494
               

               
Cow position:
               
chr4:13221992-13222405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
57, 98
               

               
Conread position:
               
68-534
               

               
Cow position:
               
chr4:4320806-4321278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 8
               

               
Conread position:
               
68-534
               

               
Cow position:
               
chr4:29805181-29805630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
64, 96
               

               
Conread position:
               
68-555
               

               
Cow position:
               
chr4:508724-509194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
314, 34
               

               
Conread position:
               
68-555
               

               
Cow position:
               
chr4:3421812-3421350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
470, 77
               

               
Conread position:
               
68-555
               

               
Cow position:
               
chr4:27276357-27276839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 29
               

               
Conread position:
               
68-555
               

               
Cow position:
               
chr4:46527192-46526703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
126, 94
               

               
Conread position:
               
69-278
               

               
Cow position:
               
chr4:41907395-41907596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
69-311
               

               
Cow position:
               
chr4:65753051-65753300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
80, 28
               

               
Conread position:
               
69-448
               

               
Cow position:
               
chr4:17186161-17186535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 71
               

               
Conread position:
               
69-525
               

               
Cow position:
               
chr4:23444851-23445314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 99
               

               
Conread position:
               
69-554
               

               
Cow position:
               
chr4:37915151-37915624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 71
               

               
Conread position:
               
70-287
               

               
Cow position:
               
chr4:33838617-33838823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
70-306
               

               
Cow position:
               
chr4:3853665-3853430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
124, 92
               

               
Conread position:
               
70-380
               

               
Cow position:
               
chr4:214196-213904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
235, 27
               

               
Conread position:
               
70-381
               

               
Cow position:
               
chr4:1419410-1419106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
126, 56
               

               
Conread position:
               
70-424
               

               
Cow position:
               
chr4:20026919-20027260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
241, 61
               

               
Conread position:
               
70-537
               

               
Cow position:
               
chr4:23509777-23509310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
251, 27
               

               
Conread position:
               
70-555
               

               
Cow position:
               
chr4:13590273-13589798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
68, 90
               

               
Conread position:
               
71-295
               

               
Cow position:
               
chr4:48381575-48381350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
69, 162
               

               
Conread position:
               
71-555
               

               
Cow position:
               
chr4:53208468-53208008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 65
               

               
Conread position:
               
74-492
               

               
Cow position:
               
chr4:68764701-68764290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
242, 89
               

               
Conread position:
               
75-245
               

               
Cow position:
               
chr4:36070883-36070718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
75-289
               

               
Cow position:
               
chr4:34653694-34653894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
75-434
               

               
Cow position:
               
chr4:33100626-33100986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
74, 45
               

               
Conread position:
               
76-443
               

               
Cow position:
               
chr4:22713315-22713669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
169, 44
               

               
Conread position:
               
77-310
               

               
Cow position:
               
chr4:60506455-60506229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
67, 19
               

               
Conread position:
               
77-336
               

               
Cow position:
               
chr4:48423047-48422805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
226, 43
               

               
Conread position:
               
78-232
               

               
Cow position:
               
chr4:68777118-68776964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
102, 98
               

               
Conread position:
               
78-233
               

               
Cow position:
               
chr4:60621417-60621568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
78-248
               

               
Cow position:
               
chr4:27511726-27511558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
78-262
               

               
Cow position:
               
chr4:19123048-19122874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
78-277
               

               
Cow position:
               
chr4:13995566-13995374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
78-410
               

               
Cow position:
               
chr4:4827311-4826980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
41, 86
               

               
Conread position:
               
78-439
               

               
Cow position:
               
chr4:54478736-54479078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
57, 88
               

               
Conread position:
               
78-479
               

               
Cow position:
               
chr4:43740709-43740307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
156, 62
               

               
Conread position:
               
78-525
               

               
Cow position:
               
chr4:31004234-31004667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
176, 48
               

               
Conread position:
               
78-528
               

               
Cow position:
               
chr4:46550567-46550118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 21
               

               
Conread position:
               
78-538
               

               
Cow position:
               
chr4:45775152-45775617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 90
               

               
Conread position:
               
78-554
               

               
Cow position:
               
chr4:23600347-23599877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 12
               

               
Conread position:
               
78-555
               

               
Cow position:
               
chr4:17124131-17124587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
230, 64
               

               
Conread position:
               
78-555
               

               
Cow position:
               
chr4:26323922-26323446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 85
               

               
Conread position:
               
79-389
               

               
Cow position:
               
chr4:54171802-54171503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
90, 61
               

               
Conread position:
               
81-290
               

               
Cow position:
               
chr4:26901497-26901301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
81-555
               

               
Cow position:
               
chr4:68387964-68387499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 60
               

               
Conread position:
               
82-555
               

               
Cow position:
               
chr4:42423631-42424097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
361, 69
               

               
Conread position:
               
84-555
               

               
Cow position:
               
chr4:10732392-10731923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
265, 61
               

               
Conread position:
               
84-555
               

               
Cow position:
               
chr4:19097463-19096999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
415, 78
               

               
Conread position:
               
88-247
               

               
Cow position:
               
chr4:53380859-53380702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
88-403
               

               
Cow position:
               
chr4:25537718-25537407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 72
               

               
Conread position:
               
88-443
               

               
Cow position:
               
chr4:63768-64117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
63, 94
               

               
Conread position:
               
88-539
               

               
Cow position:
               
chr4:17052417-17052873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 81
               

               
Conread position:
               
89-312
               

               
Cow position:
               
chr4:3268203-3268411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
90-283
               

               
Cow position:
               
chr4:34983337-34983515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
90-540
               

               
Cow position:
               
chr4:25888677-25889113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
260, 46
               

               
Conread position:
               
93-410
               

               
Cow position:
               
chr4:37313334-37313025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
56, 148
               

               
Conread position:
               
97-535
               

               
Cow position:
               
chr4:7571569-7571136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 35
               

               
Conread position:
               
97-555
               

               
Cow position:
               
chr4:45738304-45738775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 161
               

               
Conread position:
               
103-252
               

               
Cow position:
               
chr4:22050959-22051106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
46, 62
               

               
Conread position:
               
103-271
               

               
Cow position:
               
chr4:54650331-54650492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
103-504
               

               
Cow position:
               
chr4:2602389-2601991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
46, 62
               

               
Conread position:
               
103-519
               

               
Cow position:
               
chr4:50203910-50203490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
247, 79
               

               
Conread position:
               
103-537
               

               
Cow position:
               
chr4:39456194-39455779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
247, 36
               

               
Conread position:
               
103-551
               

               
Cow position:
               
chr4:36893521-36893064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 142
               

               
Conread position:
               
103-553
               

               
Cow position:
               
chr4:38999578-38999136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
245, 46
               

               
Conread position:
               
103-555
               

               
Cow position:
               
chr4:10703531-10703981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
123, 78
               

               
Conread position:
               
103-555
               

               
Cow position:
               
chr4:46476785-46477234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 63
               

               
Conread position:
               
104-518
               

               
Cow position:
               
chr4:63964839-63965247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 53
               

               
Conread position:
               
109-555
               

               
Cow position:
               
chr4:8412962-8413406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 144
               

               
Conread position:
               
110-536
               

               
Cow position:
               
chr4:46455919-46456321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
238, 52
               

               
Conread position:
               
112-461
               

               
Cow position:
               
chr4:10379258-10378914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
5, 49
               

               
Conread position:
               
114-546
               

               
Cow position:
               
chr4:36731333-36730906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
11, 32
               

               
Conread position:
               
122-555
               

               
Cow position:
               
chr4:53100942-53100510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 122
               

               
Conread position:
               
124-379
               

               
Cow position:
               
chr4:17084205-17084455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
130, 37
               

               
Conread position:
               
124-397
               

               
Cow position:
               
chr4:48396660-48396927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
131, 38
               

               
Conread position:
               
126-555
               

               
Cow position:
               
chr4:48961358-48961786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 19
               

               
Conread position:
               
127-503
               

               
Cow position:
               
chr4:7808703-7808345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
27, 5
               

               
Conread position:
               
131-325
               

               
Cow position:
               
chr4:65131329-65131514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
172, 27
               

               
Conread position:
               
131-349
               

               
Cow position:
               
chr4:49826379-49826170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
172, 19
               

               
Conread position:
               
132-348
               

               
Cow position:
               
chr4:19098600-19098383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
113, 31
               

               
Conread position:
               
132-519
               

               
Cow position:
               
chr4:45367867-45367479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 31
               

               
Conread position:
               
132-526
               

               
Cow position:
               
chr4:32726351-32725960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
219, 29
               

               
Conread position:
               
132-527
               

               
Cow position:
               
chr4:58880838-58881228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 28
               

               
Conread position:
               
132-554
               

               
Cow position:
               
chr4:44782502-44782079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 31
               

               
Conread position:
               
133-555
               

               
Cow position:
               
chr4:9815222-9815645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 28
               

               
Conread position:
               
136-555
               

               
Cow position:
               
chr4:12903944-12903521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 25
               

               
Conread position:
               
137-337
               

               
Cow position:
               
chr4:19324097-19323901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
175, 25
               

               
Conread position:
               
139-550
               

               
Cow position:
               
chr4:19582497-19582907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 23
               

               
Conread position:
               
139-553
               

               
Cow position:
               
chr4:43865736-43866145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
10, 24
               

               
Conread position:
               
142-477
               

               
Cow position:
               
chr4:13941574-13941246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
206, 21
               

               
Conread position:
               
145-555
               

               
Cow position:
               
chr4:63459106-63459511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
5, 96
               

               
Conread position:
               
147-348
               

               
Cow position:
               
chr4:66136495-66136687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
147-448
               

               
Cow position:
               
chr4:34369339-34369636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
202, 13
               

               
Conread position:
               
150-359
               

               
Cow position:
               
chr4:34503405-34503198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
200, 14
               

               
Conread position:
               
150-554
               

               
Cow position:
               
chr4:27755192-27755600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
14, 91
               

               
Conread position:
               
151-313
               

               
Cow position:
               
chr4:36744687-36744531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
151-331
               

               
Cow position:
               
chr4:54541529-54541706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
152, 11
               

               
Conread position:
               
151-555
               

               
Cow position:
               
chr4:60897174-60897569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 12
               

               
Conread position:
               
161-546
               

               
Cow position:
               
chr4:65179047-65179417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
13, 81
               

               
Conread position:
               
162-331
               

               
Cow position:
               
chr4:36517384-36517551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
137, 80
               

               
Conread position:
               
162-342
               

               
Cow position:
               
chr4:61235105-61235279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
11, 48
               

               
Conread position:
               
162-381
               

               
Cow position:
               
chr4:68889462-68889673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
162-469
               

               
Cow position:
               
chr4:54111840-54111540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
183, 29
               

               
Conread position:
               
162-507
               

               
Cow position:
               
chr4:61897436-61897784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 89
               

               
Conread position:
               
162-518
               

               
Cow position:
               
chr4:42921761-42922102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 73
               

               
Conread position:
               
162-540
               

               
Cow position:
               
chr4:12561139-12560762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
79, 160
               

               
Conread position:
               
162-546
               

               
Cow position:
               
chr4:3850650-3850269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 78
               

               
Conread position:
               
162-554
               

               
Cow position:
               
chr4:11194284-11193890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 68
               

               
Conread position:
               
163-467
               

               
Cow position:
               
chr4:16594180-16593880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
139, 77
               

               
Conread position:
               
163-526
               

               
Cow position:
               
chr4:47348924-47348568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 77
               

               
Conread position:
               
163-552
               

               
Cow position:
               
chr4:12049344-12048955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 70
               

               
Conread position:
               
163-554
               

               
Cow position:
               
chr4:21010-20631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
178, 77
               

               
Conread position:
               
163-555
               

               
Cow position:
               
chr4:37935187-37935577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 76
               

               
Conread position:
               
164-331
               

               
Cow position:
               
chr4:42176377-42176537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
164-555
               

               
Cow position:
               
chr4:24001870-24002265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 29
               

               
Conread position:
               
164-555
               

               
Cow position:
               
chr4:62771822-62772231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
9, 88
               

               
Conread position:
               
165-552
               

               
Cow position:
               
chr4:33433159-33433549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 93
               

               
Conread position:
               
166-555
               

               
Cow position:
               
chr4:17111779-17112174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 62
               

               
Conread position:
               
167-337
               

               
Cow position:
               
chr4:61478699-61478530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
144, 85
               

               
Conread position:
               
167-523
               

               
Cow position:
               
chr4:63095980-63096336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 90
               

               
Conread position:
               
167-526
               

               
Cow position:
               
chr4:55395855-55395504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
183, 41
               

               
Conread position:
               
167-555
               

               
Cow position:
               
chr4:38952647-38952263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 41
               

               
Conread position:
               
169-546
               

               
Cow position:
               
chr4:22842436-22842066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
51, 7
               

               
Conread position:
               
171-555
               

               
Cow position:
               
chr4:21257034-21257422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 85
               

               
Conread position:
               
175-552
               

               
Cow position:
               
chr4:16799100-16799482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 76
               

               
Conread position:
               
176-536
               

               
Cow position:
               
chr4:20139432-20139793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 38
               

               
Conread position:
               
180-505
               

               
Cow position:
               
chr4:21232793-21233110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 71
               

               
Conread position:
               
184-464
               

               
Cow position:
               
chr4:11332174-11331890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 130
               

               
Conread position:
               
184-553
               

               
Cow position:
               
chr4:66111994-66112368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 67
               

               
Conread position:
               
189-453
               

               
Cow position:
               
chr4:46552265-46552508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
161, 62
               

               
Conread position:
               
190-536
               

               
Cow position:
               
chr4:51739646-51739977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
159, 51
               

               
Conread position:
               
190-537
               

               
Cow position:
               
chr4:620064-620427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 44
               

               
Conread position:
               
193-528
               

               
Cow position:
               
chr4:24744338-24744679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 19
               

               
Conread position:
               
194-405
               

               
Cow position:
               
chr4:67466789-67466584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
156, 60
               

               
Conread position:
               
195-505
               

               
Cow position:
               
chr4:65432216-65431906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
146, 45
               

               
Conread position:
               
199-528
               

               
Cow position:
               
chr4:8947457-8947138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
95, 44
               

               
Conread position:
               
200-554
               

               
Cow position:
               
chr4:39231460-39231818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 40
               

               
Conread position:
               
208-497
               

               
Cow position:
               
chr4:19463550-19463258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 6
               

               
Conread position:
               
211-523
               

               
Cow position:
               
chr4:123160-123462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
180, 22
               

               
Conread position:
               
211-555
               

               
Cow position:
               
chr4:14470520-14470864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
239, 32
               

               
Conread position:
               
212-555
               

               
Cow position:
               
chr4:19497217-19497543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
287, 22
               

               
Conread position:
               
216-533
               

               
Cow position:
               
chr4:20299320-20298998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 35
               

               
Conread position:
               
226-555
               

               
Cow position:
               
chr4:46058729-46059037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
124, 25
               

               
Conread position:
               
229-527
               

               
Cow position:
               
chr4:53209269-53208974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
121, 22
               

               
Conread position:
               
231-537
               

               
Cow position:
               
chr4:24458073-24458372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
268, 20
               

               
Conread position:
               
246-546
               

               
Cow position:
               
chr4:33357954-33357650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
60, 69
               

               
Conread position:
               
253-555
               

               
Cow position:
               
chr4:2422587-2422286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
97, 37
               

               
Conread position:
               
254-415
               

               
Cow position:
               
chr4:47047905-47047743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
255-532
               

               
Cow position:
               
chr4:67408536-67408271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
152, 88
               

               
Conread position:
               
255-536
               

               
Cow position:
               
chr4:19438474-19438184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
257-555
               

               
Cow position:
               
chr4:22215646-22215952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 65
               

               
Conread position:
               
258-481
               

               
Cow position:
               
chr4:36725047-36724826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
39, 178
               

               
Conread position:
               
258-554
               

               
Cow position:
               
chr4:48137918-48137619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 55
               

               
Conread position:
               
258-554
               

               
Cow position:
               
chr4:56233688-56233396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 77
               

               
Conread position:
               
264-497
               

               
Cow position:
               
chr4:41907801-41908024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
33, 54
               

               
Conread position:
               
265-495
               

               
Cow position:
               
chr4:37465597-37465814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
117, 34
               

               
Conread position:
               
293-555
               

               
Cow position:
               
chr4:39009938-39009673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
48, 35
               

               
Conread position:
               
303-555
               

               
Cow position:
               
chr4:56513982-56514231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
137, 12
               

               
Conread position:
               
314-536
               

               
Cow position:
               
chr4:44072814-44073044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
316-493
               

               
Cow position:
               
chr4:44902386-44902215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
34, 111
               

               
Conread position:
               
347-521
               

               
Cow position:
               
chr4:2536749-2536574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
151, 118
               

               
Conread position:
               
349-525
               

               
Cow position:
               
chr4:10472139-10471960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
150, 0
               

               
Conread position:
               
349-528
               

               
Cow position:
               
chr4:43495817-43495636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
150, 0
               

               
Conread position:
               
351-555
               

               
Cow position:
               
chr4:22744239-22744033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
84, 148
               
Show alignments to all cow chromosomes.