Cow genome map


           Conread name:
           rptbr0110_c8.y1
        

               Conread position:
               1-117
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               97
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               1-149
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               1-170
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               1-177
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               18, 90
               

               Conread position:
               1-181
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               1-185
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               156
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               1-198
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               15, 78
               

               Conread position:
               1-199
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               1-204
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               18, 202
               

               Conread position:
               1-205
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               153
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               1-216
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               18, 169
               

               Conread position:
               1-216
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               18, 68
               

               Conread position:
               1-217
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               157
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               18, 101
               

               Conread position:
               1-219
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               168
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               23, 146
               

               Conread position:
               1-220
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               1-239
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               187
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               18, 62
               

               Conread position:
               1-297
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               215
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               28, 15
               

               Conread position:
               1-297
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               221
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               19, 11
               

               Conread position:
               1-311
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               1-326
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               227
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               15, 114
               

               Conread position:
               1-334
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 120
               

               Conread position:
               1-346
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 51
               

               Conread position:
               1-346
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 15
               

               Conread position:
               1-354
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 247
               

               Conread position:
               2-166
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               125
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               2-197
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               146
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               118, 49
               

               Conread position:
               2-197
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               17, 123
               

               Conread position:
               2-197
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               154
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               17, 148
               

               Conread position:
               2-198
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               17, 50
               

               Conread position:
               2-198
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               18, 96
               

               Conread position:
               2-199
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               17, 50
               

               Conread position:
               2-217
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               2-217
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               65, 23
               

               Conread position:
               2-220
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               160
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               50, 218
               

               Conread position:
               2-236
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               22, 229
               

               Conread position:
               2-251
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               2-268
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               2-313
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               193
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               50, 102
               

               Conread position:
               2-329
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               240
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               50, 116
               

               Conread position:
               2-331
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 190
               

               Conread position:
               2-332
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 180
               

               Conread position:
               2-332
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 43
               

               Conread position:
               2-337
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 14
               

               Conread position:
               2-350
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               264
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               17, 130
               

               Conread position:
               3-251
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               49, 246
               

               Conread position:
               3-332
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               244
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               42, 100
               

               Conread position:
               4-198
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               20, 48
               

               Conread position:
               4-358
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 215
               

               Conread position:
               6-142
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               106
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               6-197
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               157
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               13, 98
               

               Conread position:
               6-199
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               10, 114
               

               Conread position:
               6-204
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               6-332
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               243
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               10, 90
               

               Conread position:
               11-256
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               13, 120
               

               Conread position:
               15-332
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 29
               

               Conread position:
               16-344
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               244
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               50, 87
               

               Conread position:
               21-264
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               187
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               31, 0
               
Show alignments to all cow chromosomes.