Cow genome map


           Conread name:
           rptbr0110_c8.y1
        

               Conread position:
               1-134
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               18, 119
               

               Conread position:
               1-137
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               1-174
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               60, 120
               

               Conread position:
               1-178
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               1-198
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               60, 20
               

               Conread position:
               1-198
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               1-204
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               66, 21
               

               Conread position:
               1-217
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               174
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               1-217
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               1-217
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               1-229
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               23, 69
               

               Conread position:
               1-264
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               65, 48
               

               Conread position:
               1-311
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 130
               

               Conread position:
               1-333
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 323
               

               Conread position:
               1-337
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 327
               

               Conread position:
               1-343
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 15
               

               Conread position:
               1-344
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 261
               

               Conread position:
               1-346
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 220
               

               Conread position:
               1-346
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 66
               

               Conread position:
               1-358
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 60
               

               Conread position:
               2-167
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               22, 122
               

               Conread position:
               2-217
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               22, 164
               

               Conread position:
               2-236
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               14, 125
               

               Conread position:
               2-268
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               22, 50
               

               Conread position:
               2-308
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 63
               

               Conread position:
               2-330
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               239
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               14, 120
               

               Conread position:
               2-331
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 336
               

               Conread position:
               2-332
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               246
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               50, 183
               

               Conread position:
               2-332
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               233
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               55, 134
               

               Conread position:
               2-337
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 86
               

               Conread position:
               2-337
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               252
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               17, 11
               

               Conread position:
               2-352
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 172
               

               Conread position:
               2-358
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 50
               

               Conread position:
               3-177
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               137
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               16, 65
               

               Conread position:
               3-301
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               211
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               16, 112
               

               Conread position:
               4-219
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               5-217
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               6-285
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 173
               

               Conread position:
               6-330
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 46
               

               Conread position:
               6-341
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 327
               

               Conread position:
               6-348
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 10
               

               Conread position:
               7-332
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 122
               

               Conread position:
               8-330
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               243
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               11, 79
               

               Conread position:
               9-216
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               159
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               106, 72
               

               Conread position:
               13-340
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 38
               

               Conread position:
               15-307
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 81
               

               Conread position:
               15-350
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               245
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               34, 214
               

               Conread position:
               16-329
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 87
               

               Conread position:
               16-340
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               243
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               36, 239
               

               Conread position:
               18-199
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               129
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               102, 26
               

               Conread position:
               18-325
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 141
               

               Conread position:
               19-337
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 32
               

               Conread position:
               22-326
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 22
               

               Conread position:
               29-216
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               38, 150
               
Show alignments to all cow chromosomes.