Cow genome map


           Conread name:
           rptbr0110_c8.y1
        

               Conread position:
               1-118
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               99
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               1-170
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               23, 51
               

               Conread position:
               1-188
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               18, 86
               

               Conread position:
               1-196
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               15, 105
               

               Conread position:
               1-196
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               15, 143
               

               Conread position:
               1-210
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               170
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               18, 97
               

               Conread position:
               1-216
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               179
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               1-216
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               171
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               18, 55
               

               Conread position:
               1-216
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               18, 90
               

               Conread position:
               1-219
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               1-221
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               1-345
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 96
               

               Conread position:
               1-345
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               253
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               24, 11
               

               Conread position:
               1-345
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 120
               

               Conread position:
               1-393
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 28
               

               Conread position:
               2-152
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               12, 119
               

               Conread position:
               2-179
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               141
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               2-216
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               179
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 195
               

               Conread position:
               2-217
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               169
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               14, 186
               

               Conread position:
               2-268
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               204
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               22, 64
               

               Conread position:
               2-280
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               199
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               43, 115
               

               Conread position:
               2-287
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               220
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               2-306
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               225
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               14, 277
               

               Conread position:
               2-311
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 93
               

               Conread position:
               2-332
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               247
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               43, 79
               

               Conread position:
               2-332
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 94
               

               Conread position:
               2-334
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 78
               

               Conread position:
               2-337
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               252
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               14, 197
               

               Conread position:
               2-337
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 241
               

               Conread position:
               2-340
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 23
               

               Conread position:
               2-343
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 73
               

               Conread position:
               2-350
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 333
               

               Conread position:
               2-354
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 329
               

               Conread position:
               2-362
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 333
               

               Conread position:
               3-217
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               21, 148
               

               Conread position:
               4-216
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               15, 102
               

               Conread position:
               4-217
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               172
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               97, 10
               

               Conread position:
               4-217
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               21, 83
               

               Conread position:
               4-326
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 213
               

               Conread position:
               5-198
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               14, 112
               

               Conread position:
               5-334
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               251
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               15, 86
               

               Conread position:
               5-346
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               258
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               18, 93
               

               Conread position:
               5-358
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 283
               

               Conread position:
               6-326
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 171
               

               Conread position:
               8-332
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               247
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               8, 88
               

               Conread position:
               12-197
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               7, 113
               

               Conread position:
               15-340
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 302
               

               Conread position:
               18-278
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               33, 103
               

               Conread position:
               18-325
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 79
               

               Conread position:
               18-350
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               238
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               47, 33
               

               Conread position:
               195-401
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               28, 119
               
Show alignments to all cow chromosomes.