Cow genome map
| Conread name: | rptbr0110_c8.y1 |
| Conread position: | 1-167 |
| Cow position: | chr12:38484472-38484650 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 1-189 |
| Cow position: | chr12:35354706-35354509 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 18, 43 |
| Conread position: | 1-331 |
| Cow position: | chr12:35807600-35807266 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 81 |
| Conread position: | 1-354 |
| Cow position: | chr12:47799905-47800256 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 116 |
| Conread position: | 1-362 |
| Cow position: | chr12:25312451-25312825 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 328 |
| Conread position: | 2-210 |
| Cow position: | chr12:5905973-5905760 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 14, 85 |
| Conread position: | 2-210 |
| Cow position: | chr12:40270173-40270383 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 11, 104 |
| Conread position: | 2-212 |
| Cow position: | chr12:1848615-1848837 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 18, 10 |
| Conread position: | 2-216 |
| Cow position: | chr12:12939004-12939233 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 170 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 2-217 |
| Cow position: | chr12:3757118-3757341 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 18, 110 |
| Conread position: | 2-217 |
| Cow position: | chr12:15530977-15530759 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 154 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 14, 133 |
| Conread position: | 2-277 |
| Cow position: | chr12:17881780-17881505 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 54, 10 |
| Conread position: | 2-287 |
| Cow position: | chr12:25561289-25560994 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 2-302 |
| Cow position: | chr12:40910372-40910682 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 10 |
| Conread position: | 2-329 |
| Cow position: | chr12:20326693-20326354 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 262 |
| Conread position: | 2-333 |
| Cow position: | chr12:8868958-8869311 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 247 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 22, 335 |
| Conread position: | 3-145 |
| Cow position: | chr12:35985056-35984901 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 22, 12 |
| Conread position: | 3-207 |
| Cow position: | chr12:34103216-34103429 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 6-218 |
| Cow position: | chr12:30728320-30728547 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 6-316 |
| Cow position: | chr12:30596384-30596060 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 6-332 |
| Cow position: | chr12:37770789-37770452 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 5 |
| Conread position: | 12-204 |
| Cow position: | chr12:40824174-40824382 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 15-350 |
| Cow position: | chr12:4008372-4008716 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 248 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 34, 155 |
| Conread position: | 18-213 |
| Cow position: | chr12:3510469-3510265 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 18-242 |
| Cow position: | chr12:44832838-44832614 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 154, 105 |
| Conread position: | 18-311 |
| Cow position: | chr12:16359781-16359473 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 216 |
| Conread position: | 28-212 |
| Cow position: | chr12:23983559-23983369 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 63, 122 |
Show alignments to all cow chromosomes.