Cow genome map


           Conread name:
           rptbr0110_c8.y1
        

               Conread position:
               1-118
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               97
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               18, 43
               

               Conread position:
               1-167
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               139
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               19, 158
               

               Conread position:
               1-167
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               1-189
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               157
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               18, 9
               

               Conread position:
               1-196
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               1-198
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               18, 81
               

               Conread position:
               1-198
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               156
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               1-199
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               147
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               1-210
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               1-215
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               170
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               11, 105
               

               Conread position:
               1-216
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               155
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               23, 7
               

               Conread position:
               1-239
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               192
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               1-273
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               23, 38
               

               Conread position:
               1-273
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               23, 38
               

               Conread position:
               1-286
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               219
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               18, 60
               

               Conread position:
               1-310
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               237
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               18, 97
               

               Conread position:
               1-311
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 86
               

               Conread position:
               1-330
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               243
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               18, 72
               

               Conread position:
               1-332
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 96
               

               Conread position:
               1-335
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 288
               

               Conread position:
               1-337
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 97
               

               Conread position:
               1-356
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 326
               

               Conread position:
               2-167
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               129
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               2-186
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               50, 19
               

               Conread position:
               2-189
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               2-196
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               17, 50
               

               Conread position:
               2-217
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               2-250
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               202
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               22, 169
               

               Conread position:
               2-293
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 19
               

               Conread position:
               2-294
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 10
               

               Conread position:
               2-307
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               222
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               20, 43
               

               Conread position:
               2-332
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               242
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               17, 123
               

               Conread position:
               2-332
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 197
               

               Conread position:
               2-333
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 332
               

               Conread position:
               2-333
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 199
               

               Conread position:
               2-334
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 43
               

               Conread position:
               2-340
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 80
               

               Conread position:
               2-345
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 120
               

               Conread position:
               2-345
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 95
               

               Conread position:
               2-346
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 73
               

               Conread position:
               3-230
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               13, 117
               

               Conread position:
               4-307
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 267
               

               Conread position:
               5-198
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               146
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               14, 101
               

               Conread position:
               6-220
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               44, 111
               

               Conread position:
               6-271
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               215
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               6-300
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 66
               

               Conread position:
               6-325
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               241
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               13, 133
               

               Conread position:
               6-332
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 100
               

               Conread position:
               6-332
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 24
               

               Conread position:
               16-216
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               154
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               36, 8
               

               Conread position:
               16-334
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 317
               

               Conread position:
               18-198
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               136
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               18-216
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               102, 42
               

               Conread position:
               18-256
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               34, 69
               

               Conread position:
               18-330
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 278
               

               Conread position:
               18-350
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 33
               

               Conread position:
               23-273
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               63, 71
               

               Conread position:
               27-358
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 93
               

               Conread position:
               29-325
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 298
               
Show alignments to all cow chromosomes.