Cow genome map

Conread name: rptbr0110_c8.y1

Conread position: 1-113
Cow position:
Alignm length: 114
Alignm identity: 92
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 18, 64

Conread position: 1-132
Cow position:
Alignm length: 135
Alignm identity: 105
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 18, 72

Conread position: 1-181
Cow position:
Alignm length: 190
Alignm identity: 141
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 18, 0

Conread position: 1-186
Cow position:
Alignm length: 189
Alignm identity: 136
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 119, 59

Conread position: 1-189
Cow position:
Alignm length: 201
Alignm identity: 149
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 18, 0

Conread position: 1-199
Cow position:
Alignm length: 208
Alignm identity: 158
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 52, 197

Conread position: 1-210
Cow position:
Alignm length: 225
Alignm identity: 167
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 18, 0

Conread position: 1-211
Cow position:
Alignm length: 230
Alignm identity: 170
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 18, 0

Conread position: 1-214
Cow position:
Alignm length: 221
Alignm identity: 170
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 18, 142

Conread position: 1-220
Cow position:
Alignm length: 230
Alignm identity: 168
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 18, 0

Conread position: 1-231
Cow position:
Alignm length: 246
Alignm identity: 176
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 66, 20

Conread position: 1-239
Cow position:
Alignm length: 250
Alignm identity: 192
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 18, 231

Conread position: 1-276
Cow position:
Alignm length: 285
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 20

Conread position: 1-301
Cow position:
Alignm length: 315
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 212

Conread position: 1-323
Cow position:
Alignm length: 339
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 327

Conread position: 1-325
Cow position:
Alignm length: 337
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 51

Conread position: 1-337
Cow position:
Alignm length: 372
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 27

Conread position: 1-339
Cow position:
Alignm length: 354
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 325

Conread position: 1-345
Cow position:
Alignm length: 357
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 323

Conread position: 1-346
Cow position:
Alignm length: 361
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 318

Conread position: 1-346
Cow position:
Alignm length: 356
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 215

Conread position: 1-357
Cow position:
Alignm length: 368
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 125

Conread position: 1-358
Cow position:
Alignm length: 369
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 60

Conread position: 2-152
Cow position:
Alignm length: 157
Alignm identity: 120
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 22, 0

Conread position: 2-172
Cow position:
Alignm length: 175
Alignm identity: 128
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 14, 121

Conread position: 2-186
Cow position:
Alignm length: 191
Alignm identity: 150
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 17, 126

Conread position: 2-189
Cow position:
Alignm length: 201
Alignm identity: 145
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 14, 168

Conread position: 2-198
Cow position:
Alignm length: 209
Alignm identity: 147
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 14, 0

Conread position: 2-198
Cow position:
Alignm length: 201
Alignm identity: 143
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 50, 117

Conread position: 2-213
Cow position:
Alignm length: 229
Alignm identity: 164
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 50, 150

Conread position: 2-229
Cow position:
Alignm length: 234
Alignm identity: 162
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 50, 10

Conread position: 2-236
Cow position:
Alignm length: 243
Alignm identity: 170
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 22, 81

Conread position: 2-309
Cow position:
Alignm length: 317
Alignm identity: 225
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 22, 226

Conread position: 2-331
Cow position:
Alignm length: 342
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 314

Conread position: 2-332
Cow position:
Alignm length: 341
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 122

Conread position: 2-332
Cow position:
Alignm length: 346
Alignm identity: 243
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 50, 324

Conread position: 2-337
Cow position:
Alignm length: 344
Alignm identity: 240
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 22, 123

Conread position: 2-345
Cow position:
Alignm length: 364
Alignm identity: 253
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 22, 170

Conread position: 2-346
Cow position:
Alignm length: 360
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 103

Conread position: 2-354
Cow position:
Alignm length: 365
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 61

Conread position: 2-357
Cow position:
Alignm length: 374
Alignm identity: 264
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 70, 10

Conread position: 3-332
Cow position:
Alignm length: 341
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 194

Conread position: 3-332
Cow position:
Alignm length: 337
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 41

Conread position: 5-357
Cow position:
Alignm length: 364
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 185

Conread position: 6-331
Cow position:
Alignm length: 340
Alignm identity: 241
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 10, 87

Conread position: 6-332
Cow position:
Alignm length: 342
Alignm identity: 240
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 19, 263

Conread position: 6-344
Cow position:
Alignm length: 349
Alignm identity: 248
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 46, 112

Conread position: 16-220
Cow position:
Alignm length: 213
Alignm identity: 158
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 36, 0

Conread position: 16-337
Cow position:
Alignm length: 329
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 47

Conread position: 17-260
Cow position:
Alignm length: 252
Alignm identity: 179
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 50, 34

Conread position: 18-197
Cow position:
Alignm length: 190
Alignm identity: 140
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 34, 78

Conread position: 18-205
Cow position:
Alignm length: 195
Alignm identity: 141
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 34, 78

Conread position: 18-245
Cow position:
Alignm length: 238
Alignm identity: 169
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 27, 0

Conread position: 18-254
Cow position:
Alignm length: 254
Alignm identity: 189
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 34, 155

Conread position: 18-302
Cow position:
Alignm length: 303
Alignm identity: 215
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 34, 0

Conread position: 18-392
Cow position:
Alignm length: 391
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 178

Conread position: 19-337
Cow position:
Alignm length: 339
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 289

Conread position: 20-292
Cow position:
Alignm length: 283
Alignm identity: 208
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 32, 79

Conread position: 21-337
Cow position:
Alignm length: 332
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 43

Conread position: 22-216
Cow position:
Alignm length: 205
Alignm identity: 149
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 38, 130

Show alignments to all cow chromosomes.