Cow genome map


           Conread name:
           rptbr0110_c8.y1
        

               Conread position:
               1-167
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               18, 11
               

               Conread position:
               1-178
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               20, 167
               

               Conread position:
               1-180
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               1-195
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               23, 105
               

               Conread position:
               1-196
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               149
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               23, 160
               

               Conread position:
               1-197
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               15, 183
               

               Conread position:
               1-200
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               18, 202
               

               Conread position:
               1-212
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               18, 59
               

               Conread position:
               1-214
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               1-216
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               1-216
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               15, 85
               

               Conread position:
               1-217
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               1-302
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 193
               

               Conread position:
               1-302
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               218
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               18, 71
               

               Conread position:
               1-330
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 51
               

               Conread position:
               1-337
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 328
               

               Conread position:
               1-346
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 70
               

               Conread position:
               1-353
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 85
               

               Conread position:
               1-358
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               263
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               23, 151
               

               Conread position:
               2-185
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               137
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               50, 85
               

               Conread position:
               2-198
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               17, 59
               

               Conread position:
               2-210
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               50, 12
               

               Conread position:
               2-213
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               22, 49
               

               Conread position:
               2-216
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               14, 114
               

               Conread position:
               2-241
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               184
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               22, 51
               

               Conread position:
               2-285
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               206
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               12, 136
               

               Conread position:
               2-286
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               73, 49
               

               Conread position:
               2-292
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 97
               

               Conread position:
               2-312
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               233
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               2-331
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 71
               

               Conread position:
               2-340
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 92
               

               Conread position:
               2-340
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 50
               

               Conread position:
               2-350
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 91
               

               Conread position:
               2-354
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 10
               

               Conread position:
               3-181
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               133
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               3-337
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               240
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               16, 106
               

               Conread position:
               4-277
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               196
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               4-343
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               256
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               15, 275
               

               Conread position:
               6-256
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               197
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               10, 118
               

               Conread position:
               6-333
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 322
               

               Conread position:
               7-311
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               218
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               9, 92
               

               Conread position:
               14-332
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               235
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               38, 311
               

               Conread position:
               15-277
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               93, 29
               

               Conread position:
               15-346
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 315
               

               Conread position:
               16-194
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               36, 98
               

               Conread position:
               16-376
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               255
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               156, 11
               

               Conread position:
               17-307
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               218
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               35, 231
               

               Conread position:
               18-217
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               18-277
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               187
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               30, 53
               
Show alignments to all cow chromosomes.