Cow genome map

Conread name: rptbr0110_c8.y1

Conread position: 1-150
Cow position:
Alignm length: 157
Alignm identity: 119
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 18, 32

Conread position: 1-157
Cow position:
Alignm length: 168
Alignm identity: 124
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 1-189
Cow position:
Alignm length: 195
Alignm identity: 151
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 107, 20

Conread position: 1-198
Cow position:
Alignm length: 207
Alignm identity: 158
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 18, 104

Conread position: 1-216
Cow position:
Alignm length: 229
Alignm identity: 168
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 23, 148

Conread position: 1-216
Cow position:
Alignm length: 223
Alignm identity: 158
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 18, 93

Conread position: 1-217
Cow position:
Alignm length: 230
Alignm identity: 180
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 18, 66

Conread position: 1-255
Cow position:
Alignm length: 263
Alignm identity: 187
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 18, 122

Conread position: 1-301
Cow position:
Alignm length: 309
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 182

Conread position: 1-307
Cow position:
Alignm length: 323
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 205

Conread position: 1-334
Cow position:
Alignm length: 341
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 120

Conread position: 1-343
Cow position:
Alignm length: 347
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 62

Conread position: 1-344
Cow position:
Alignm length: 364
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 59

Conread position: 1-345
Cow position:
Alignm length: 354
Alignm identity: 248
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 23, 205

Conread position: 1-346
Cow position:
Alignm length: 372
Alignm identity: 263
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 56, 125

Conread position: 1-346
Cow position:
Alignm length: 362
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 327

Conread position: 1-359
Cow position:
Alignm length: 392
Alignm identity: 279
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 18, 318

Conread position: 1-366
Cow position:
Alignm length: 373
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 62

Conread position: 1-368
Cow position:
Alignm length: 384
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 328

Conread position: 1-378
Cow position:
Alignm length: 393
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 324

Conread position: 2-117
Cow position:
Alignm length: 117
Alignm identity: 96
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 17, 0

Conread position: 2-186
Cow position:
Alignm length: 196
Alignm identity: 143
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 22, 0

Conread position: 2-193
Cow position:
Alignm length: 206
Alignm identity: 158
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 22, 0

Conread position: 2-197
Cow position:
Alignm length: 208
Alignm identity: 152
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 14, 0

Conread position: 2-240
Cow position:
Alignm length: 253
Alignm identity: 174
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 50, 10

Conread position: 2-253
Cow position:
Alignm length: 266
Alignm identity: 189
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 50, 85

Conread position: 2-253
Cow position:
Alignm length: 264
Alignm identity: 188
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 50, 0

Conread position: 2-273
Cow position:
Alignm length: 295
Alignm identity: 214
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 14, 265

Conread position: 2-302
Cow position:
Alignm length: 310
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 74

Conread position: 2-307
Cow position:
Alignm length: 330
Alignm identity: 235
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 22, 11

Conread position: 2-325
Cow position:
Alignm length: 326
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 50

Conread position: 2-325
Cow position:
Alignm length: 330
Alignm identity: 227
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 22, 70

Conread position: 2-332
Cow position:
Alignm length: 346
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 323

Conread position: 2-332
Cow position:
Alignm length: 342
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 321

Conread position: 2-345
Cow position:
Alignm length: 360
Alignm identity: 253
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 22, 50

Conread position: 2-354
Cow position:
Alignm length: 371
Alignm identity: 258
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 53, 193

Conread position: 3-332
Cow position:
Alignm length: 334
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 49

Conread position: 3-342
Cow position:
Alignm length: 359
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 93

Conread position: 3-345
Cow position:
Alignm length: 354
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 156

Conread position: 4-163
Cow position:
Alignm length: 161
Alignm identity: 118
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 15, 61

Conread position: 4-330
Cow position:
Alignm length: 349
Alignm identity: 235
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 15, 48

Conread position: 4-333
Cow position:
Alignm length: 345
Alignm identity: 255
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 15, 199

Conread position: 5-354
Cow position:
Alignm length: 365
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 285

Conread position: 6-199
Cow position:
Alignm length: 207
Alignm identity: 157
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 13, 0

Conread position: 6-254
Cow position:
Alignm length: 259
Alignm identity: 178
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 10, 56

Conread position: 6-271
Cow position:
Alignm length: 276
Alignm identity: 203
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 10, 118

Conread position: 6-325
Cow position:
Alignm length: 335
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 50

Conread position: 8-197
Cow position:
Alignm length: 198
Alignm identity: 146
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 16, 5

Conread position: 15-210
Cow position:
Alignm length: 201
Alignm identity: 144
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 37, 179

Conread position: 15-216
Cow position:
Alignm length: 209
Alignm identity: 153
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 37, 178

Conread position: 15-332
Cow position:
Alignm length: 334
Alignm identity: 231
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 37, 294

Conread position: 15-333
Cow position:
Alignm length: 329
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 52

Conread position: 15-337
Cow position:
Alignm length: 339
Alignm identity: 245
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 37, 52

Conread position: 18-327
Cow position:
Alignm length: 330
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 314

Conread position: 18-340
Cow position:
Alignm length: 334
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 305

Conread position: 19-286
Cow position:
Alignm length: 277
Alignm identity: 201
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 33, 146

Conread position: 19-328
Cow position:
Alignm length: 319
Alignm identity: 217
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 33, 159

Conread position: 20-345
Cow position:
Alignm length: 348
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 179

Conread position: 21-340
Cow position:
Alignm length: 329
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 23

Conread position: 21-345
Cow position:
Alignm length: 344
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 80

Conread position: 217-361
Cow position:
Alignm length: 145
Alignm identity: 116
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 7, 0

Show alignments to all cow chromosomes.