Cow genome map
| Conread name: | rptbr0110_c8.y1 |
| Conread position: | 1-217 |
| Cow position: | chr20:17670183-17669959 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 171 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 18, 44 |
| Conread position: | 1-217 |
| Cow position: | chr20:20557649-20557877 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 1-271 |
| Cow position: | chr20:42469760-42469487 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 196 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 51, 11 |
| Conread position: | 1-313 |
| Cow position: | chr20:39405763-39405424 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 250 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 29, 15 |
| Conread position: | 1-327 |
| Cow position: | chr20:19146876-19146534 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 245 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 18, 330 |
| Conread position: | 1-345 |
| Cow position: | chr20:18413856-18413508 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 188 |
| Conread position: | 1-375 |
| Cow position: | chr20:7110119-7110501 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 54 |
| Conread position: | 2-213 |
| Cow position: | chr20:38768456-38768672 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 155 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 14, 122 |
| Conread position: | 2-215 |
| Cow position: | chr20:40511758-40511978 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 22, 72 |
| Conread position: | 2-216 |
| Cow position: | chr20:14735676-14735455 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 2-220 |
| Cow position: | chr20:14679621-14679392 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 14, 119 |
| Conread position: | 2-324 |
| Cow position: | chr20:18185567-18185249 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 50 |
| Conread position: | 2-331 |
| Cow position: | chr20:28982699-28982365 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 236 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 17, 230 |
| Conread position: | 2-332 |
| Cow position: | chr20:14806886-14806547 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 247 |
| Conread position: | 2-333 |
| Cow position: | chr20:18320791-18321133 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 324 |
| Conread position: | 2-340 |
| Cow position: | chr20:19313063-19313411 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 72 |
| Conread position: | 2-345 |
| Cow position: | chr20:24391980-24391650 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 247 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 22, 50 |
| Conread position: | 2-346 |
| Cow position: | chr20:26077081-26076736 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 310 |
| Conread position: | 2-357 |
| Cow position: | chr20:12334376-12334017 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 97 |
| Conread position: | 4-187 |
| Cow position: | chr20:13994811-13994617 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 4-188 |
| Cow position: | chr20:20359786-20359970 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 15, 72 |
| Conread position: | 5-179 |
| Cow position: | chr20:11864133-11864320 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 5-324 |
| Cow position: | chr20:9433583-9433275 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 19, 104 |
| Conread position: | 10-217 |
| Cow position: | chr20:14572368-14572579 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 42, 86 |
| Conread position: | 15-189 |
| Cow position: | chr20:11043516-11043690 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 37, 107 |
| Conread position: | 18-168 |
| Cow position: | chr20:9988571-9988415 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 19-346 |
| Cow position: | chr20:23163893-23164224 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 41 |
| Conread position: | 20-345 |
| Cow position: | chr20:17831828-17831496 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 195 |
| Conread position: | 21-213 |
| Cow position: | chr20:14879767-14879567 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 46, 29 |
| Conread position: | 22-345 |
| Cow position: | chr20:18530420-18530096 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 36 |
Show alignments to all cow chromosomes.