Cow genome map

Conread name: rptbr0110_c8.y1

Conread position: 1-184
Cow position: chr22:14118934-14118739 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 149
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 19, 0

Conread position: 1-189
Cow position: chr22:25714958-25714770 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 149
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 118, 15

Conread position: 1-193
Cow position: chr22:39293793-39293992 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 159
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 51, 15

Conread position: 1-217
Cow position: chr22:4651136-4650912 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 172
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 18, 0

Conread position: 1-311
Cow position: chr22:35382292-35382631 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 142

Conread position: 1-311
Cow position: chr22:38939993-38940314 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 1-324
Cow position: chr22:33201449-33201119 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 15

Conread position: 1-334
Cow position: chr22:13235494-13235150 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 114

Conread position: 1-353
Cow position: chr22:1279431-1279790 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 164

Conread position: 1-355
Cow position: chr22:19738617-19738977 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 192

Conread position: 2-204
Cow position: chr22:34606538-34606337 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 149
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 43, 119

Conread position: 2-216
Cow position: chr22:23861196-23861411 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 166
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 69, 19

Conread position: 2-216
Cow position: chr22:25341973-25341752 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 158
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 50, 19

Conread position: 2-216
Cow position: chr22:34750630-34750409 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 160
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 50, 19

Conread position: 2-216
Cow position: chr22:40048507-40048297 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 157
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 14, 50

Conread position: 2-217
Cow position: chr22:33949045-33949272 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 160
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 19, 144

Conread position: 2-217
Cow position: chr22:37201808-37201588 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 165
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 22, 119

Conread position: 2-280
Cow position: chr22:43397967-43397684 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 210
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 14, 106

Conread position: 2-286
Cow position: chr22:30699132-30698839 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 213
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 14, 0

Conread position: 2-306
Cow position: chr22:5622763-5623056 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 229
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 17, 187

Conread position: 2-326
Cow position: chr22:16621130-16620800 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 245
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 22, 108

Conread position: 2-328
Cow position: chr22:41971206-41971533 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 237
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 14, 61

Conread position: 2-330
Cow position: chr22:9734808-9734477 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 205

Conread position: 2-331
Cow position: chr22:46567934-46568270 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 235
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 22, 80

Conread position: 2-332
Cow position: chr22:21502696-21502353 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 23

Conread position: 2-337
Cow position: chr22:24185456-24185795 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 91

Conread position: 2-345
Cow position: chr22:4974470-4974788 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 258
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 65, 49

Conread position: 2-345
Cow position: chr22:5337646-5338000 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 89

Conread position: 2-353
Cow position: chr22:4119610-4119972 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 325

Conread position: 4-330
Cow position: chr22:30710349-30710023 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 237
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 20, 146

Conread position: 4-350
Cow position: chr22:24734360-24734718 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 248
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 20, 93

Conread position: 5-354
Cow position: chr22:18926304-18925949 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 319

Conread position: 6-186
Cow position: chr22:28356988-28356798 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 138
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 43, 0

Conread position: 6-273
Cow position: chr22:33485651-33485932 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 202
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 10, 155

Conread position: 6-327
Cow position: chr22:39494247-39494584 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 246
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 46, 325

Conread position: 7-346
Cow position: chr22:26057328-26056996 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 58

Conread position: 9-217
Cow position: chr22:13274417-13274203 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 163
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 53, 104

Conread position: 15-332
Cow position: chr22:28370883-28370563 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 40

Conread position: 16-217
Cow position: chr22:26339695-26339490 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 158
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 36, 103

Conread position: 16-324
Cow position: chr22:34665988-34665677 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 225
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 36, 121

Conread position: 18-234
Cow position: chr22:2913216-2912990 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 162
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 35, 0

Conread position: 18-302
Cow position: chr22:23806605-23806904 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 199
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 33, 186

Conread position: 18-332
Cow position: chr22:11200973-11200662 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 227
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 34, 63

Conread position: 18-340
Cow position: chr22:45513577-45513911 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 242
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 34, 105

Conread position: 25-216
Cow position: chr22:25311611-25311814 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 149
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 34, 0

Conread position: 208-346
Cow position: chr22:26339259-26339123 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 111
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 12, 104

Show alignments to all cow chromosomes.