Cow genome map
| Conread name: | rptbr0110_c8.y1 |
| Conread position: | 1-140 |
| Cow position: | chr23:40651503-40651647 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 1-156 |
| Cow position: | chr23:30773717-30773881 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 1-170 |
| Cow position: | chr23:32662538-32662360 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 1-186 |
| Cow position: | chr23:25407488-25407683 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 1-195 |
| Cow position: | chr23:31897688-31897491 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 25, 75 |
| Conread position: | 1-198 |
| Cow position: | chr23:16237291-16237505 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 1-216 |
| Cow position: | chr23:22588304-22588533 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 1-302 |
| Cow position: | chr23:8930164-8930463 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 224 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 16, 51 |
| Conread position: | 1-327 |
| Cow position: | chr23:18802311-18802647 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 230 |
| Conread position: | 1-337 |
| Cow position: | chr23:19636300-19636647 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 321 |
| Conread position: | 1-345 |
| Cow position: | chr23:11434299-11434659 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 28 |
| Conread position: | 1-346 |
| Cow position: | chr23:7751142-7750800 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 236 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 15, 51 |
| Conread position: | 2-185 |
| Cow position: | chr23:27544788-27544601 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 142 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 18, 10 |
| Conread position: | 2-197 |
| Cow position: | chr23:21452772-21452977 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 2-216 |
| Cow position: | chr23:16881203-16881420 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 14, 95 |
| Conread position: | 2-277 |
| Cow position: | chr23:20752973-20752686 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 101 |
| Conread position: | 2-309 |
| Cow position: | chr23:9734374-9734061 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 179 |
| Conread position: | 2-311 |
| Cow position: | chr23:406213-406518 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 48 |
| Conread position: | 2-328 |
| Cow position: | chr23:22530456-22530781 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 179 |
| Conread position: | 2-332 |
| Cow position: | chr23:344215-344554 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 322 |
| Conread position: | 2-332 |
| Cow position: | chr23:1700865-1700543 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 237 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 112, 13 |
| Conread position: | 2-332 |
| Cow position: | chr23:14191512-14191172 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 197 |
| Conread position: | 2-332 |
| Cow position: | chr23:15056683-15057005 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 240 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 17, 220 |
| Conread position: | 2-332 |
| Cow position: | chr23:15710113-15710456 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 165 |
| Conread position: | 2-332 |
| Cow position: | chr23:39806826-39806484 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 251 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 14, 77 |
| Conread position: | 2-344 |
| Cow position: | chr23:3745568-3745222 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 254 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 18, 292 |
| Conread position: | 4-189 |
| Cow position: | chr23:11081033-11080846 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 15, 48 |
| Conread position: | 4-198 |
| Cow position: | chr23:4810711-4810505 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 5-204 |
| Cow position: | chr23:28721261-28721449 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 126, 39 |
| Conread position: | 6-198 |
| Cow position: | chr23:37224112-37224311 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 6-311 |
| Cow position: | chr23:3727440-3727760 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 230 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 7-186 |
| Cow position: | chr23:30210389-30210576 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 11, 148 |
| Conread position: | 10-216 |
| Cow position: | chr23:14662053-14662259 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 9, 58 |
| Conread position: | 18-197 |
| Cow position: | chr23:13359755-13359576 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 154, 92 |
| Conread position: | 18-198 |
| Cow position: | chr23:3140806-3140619 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 96, 33 |
| Conread position: | 18-332 |
| Cow position: | chr23:7845235-7844910 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 309 |
| Conread position: | 24-340 |
| Cow position: | chr23:27563776-27564081 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 231 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 51, 27 |
Show alignments to all cow chromosomes.