Cow genome map
| Conread name: | rptbr0110_c8.y1 |
| Conread position: | 1-199 |
| Cow position: | chr25:14467123-14467332 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 18, 176 |
| Conread position: | 1-199 |
| Cow position: | chr25:22575564-22575768 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 18, 195 |
| Conread position: | 1-212 |
| Cow position: | chr25:8512134-8512354 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 18, 191 |
| Conread position: | 1-212 |
| Cow position: | chr25:13799167-13798966 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 119, 57 |
| Conread position: | 1-213 |
| Cow position: | chr25:17566544-17566323 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 18, 123 |
| Conread position: | 1-332 |
| Cow position: | chr25:12204426-12204086 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 105 |
| Conread position: | 1-337 |
| Cow position: | chr25:18161242-18160924 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 245 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 18, 70 |
| Conread position: | 1-353 |
| Cow position: | chr25:24136483-24136847 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 15 |
| Conread position: | 1-353 |
| Cow position: | chr25:27504221-27504576 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 261 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 19, 226 |
| Conread position: | 2-180 |
| Cow position: | chr25:36033393-36033206 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 2-191 |
| Cow position: | chr25:8560819-8560628 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 17, 93 |
| Conread position: | 2-198 |
| Cow position: | chr25:36081832-36081625 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 2-204 |
| Cow position: | chr25:16001569-16001775 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 22, 118 |
| Conread position: | 2-216 |
| Cow position: | chr25:5837010-5837233 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 2-250 |
| Cow position: | chr25:2194898-2194647 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 42, 23 |
| Conread position: | 2-253 |
| Cow position: | chr25:15714827-15714574 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 99, 38 |
| Conread position: | 2-255 |
| Cow position: | chr25:8347464-8347200 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 11, 100 |
| Conread position: | 2-255 |
| Cow position: | chr25:10365797-10366060 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 193 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 50, 19 |
| Conread position: | 2-277 |
| Cow position: | chr25:9957084-9957365 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 204 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 17, 122 |
| Conread position: | 2-278 |
| Cow position: | chr25:36036826-36037122 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 2-332 |
| Cow position: | chr25:12824064-12824412 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 254 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 22, 97 |
| Conread position: | 2-340 |
| Cow position: | chr25:14791709-14791365 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 208 |
| Conread position: | 2-340 |
| Cow position: | chr25:26654865-26654517 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 288 |
| Conread position: | 5-198 |
| Cow position: | chr25:14513064-14512867 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 14, 116 |
| Conread position: | 8-212 |
| Cow position: | chr25:17702024-17702226 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 47, 17 |
| Conread position: | 8-337 |
| Cow position: | chr25:26757386-26757037 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 44 |
| Conread position: | 10-354 |
| Cow position: | chr25:1735366-1735718 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 62 |
| Conread position: | 18-197 |
| Cow position: | chr25:10204939-10205128 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 141 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 18-230 |
| Cow position: | chr25:20348800-20348574 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 27-198 |
| Cow position: | chr25:33260667-33260491 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 42, 0 |
Show alignments to all cow chromosomes.