Cow genome map
| Conread name: | rptbr0110_c8.y1 |
| Conread position: | 1-186 |
| Cow position: | chr27:14937429-14937238 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 18, 129 |
| Conread position: | 1-187 |
| Cow position: | chr27:20591979-20592175 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 1-189 |
| Cow position: | chr27:11416446-11416634 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 24, 121 |
| Conread position: | 1-198 |
| Cow position: | chr27:22771749-22771961 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 157 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 1-198 |
| Cow position: | chr27:27053294-27053500 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 1-202 |
| Cow position: | chr27:6038594-6038798 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 21, 131 |
| Conread position: | 1-229 |
| Cow position: | chr27:26441063-26440821 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 186 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 1-337 |
| Cow position: | chr27:30703077-30702748 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 242 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 18, 9 |
| Conread position: | 1-346 |
| Cow position: | chr27:6454209-6454565 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 212 |
| Conread position: | 2-198 |
| Cow position: | chr27:28164405-28164208 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 50, 13 |
| Conread position: | 2-208 |
| Cow position: | chr27:12596764-12596970 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 18, 10 |
| Conread position: | 2-277 |
| Cow position: | chr27:28190215-28189932 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 22, 38 |
| Conread position: | 2-288 |
| Cow position: | chr27:30362245-30362538 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 10 |
| Conread position: | 2-302 |
| Cow position: | chr27:27038839-27038530 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 223 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 50, 14 |
| Conread position: | 2-332 |
| Cow position: | chr27:15867396-15867724 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 236 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 51, 115 |
| Conread position: | 2-337 |
| Cow position: | chr27:13197919-13198249 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 44 |
| Conread position: | 2-342 |
| Cow position: | chr27:27064440-27064098 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 232 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 50, 60 |
| Conread position: | 2-345 |
| Cow position: | chr27:8430439-8430077 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 63 |
| Conread position: | 2-378 |
| Cow position: | chr27:21138821-21139205 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 74 |
| Conread position: | 3-350 |
| Cow position: | chr27:17472809-17473175 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 265 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 16, 282 |
| Conread position: | 4-234 |
| Cow position: | chr27:10979864-10980106 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 15, 48 |
| Conread position: | 4-329 |
| Cow position: | chr27:1353588-1353929 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 248 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 15, 129 |
| Conread position: | 4-333 |
| Cow position: | chr27:22330670-22330322 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 244 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 20, 330 |
| Conread position: | 5-329 |
| Cow position: | chr27:26428131-26427794 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 323 |
| Conread position: | 6-340 |
| Cow position: | chr27:815369-815712 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 316 |
| Conread position: | 7-340 |
| Cow position: | chr27:22179788-22179441 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 246 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 45, 5 |
| Conread position: | 9-345 |
| Cow position: | chr27:19388020-19388366 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 319 |
| Conread position: | 13-337 |
| Cow position: | chr27:435246-435584 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 233 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 36, 148 |
| Conread position: | 16-342 |
| Cow position: | chr27:12246671-12246992 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 239 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 36, 87 |
| Conread position: | 18-234 |
| Cow position: | chr27:27389002-27388786 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 112, 39 |
| Conread position: | 18-277 |
| Cow position: | chr27:29399831-29400102 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 34, 86 |
Show alignments to all cow chromosomes.