Cow genome map
| Conread name: | rptbr0110_c8.y1 |
| Conread position: | 1-176 |
| Cow position: | chr28:15081960-15082142 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 18, 13 |
| Conread position: | 1-194 |
| Cow position: | chr28:23776010-23775808 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 1-214 |
| Cow position: | chr28:23621508-23621291 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 175 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 1-220 |
| Cow position: | chr28:20963568-20963793 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 15, 104 |
| Conread position: | 1-229 |
| Cow position: | chr28:15263753-15263999 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 175 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 1-302 |
| Cow position: | chr28:14493505-14493194 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 125 |
| Conread position: | 1-302 |
| Cow position: | chr28:23231101-23231413 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 98 |
| Conread position: | 1-331 |
| Cow position: | chr28:22332498-22332176 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 238 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 44, 95 |
| Conread position: | 1-332 |
| Cow position: | chr28:29392975-29392627 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 331 |
| Conread position: | 1-333 |
| Cow position: | chr28:34150563-34150911 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 252 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 18, 260 |
| Conread position: | 1-338 |
| Cow position: | chr28:7865288-7864948 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 244 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 19, 146 |
| Conread position: | 1-345 |
| Cow position: | chr28:32300396-32300754 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 325 |
| Conread position: | 2-216 |
| Cow position: | chr28:4841436-4841656 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 128, 38 |
| Conread position: | 2-217 |
| Cow position: | chr28:16204366-16204590 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 17, 197 |
| Conread position: | 2-279 |
| Cow position: | chr28:4880305-4880589 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 69, 19 |
| Conread position: | 2-306 |
| Cow position: | chr28:8787502-8787198 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 95 |
| Conread position: | 2-331 |
| Cow position: | chr28:11451501-11451849 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 254 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 22, 10 |
| Conread position: | 2-332 |
| Cow position: | chr28:3914674-3914335 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 316 |
| Conread position: | 2-337 |
| Cow position: | chr28:3751275-3750931 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 14 |
| Conread position: | 2-345 |
| Cow position: | chr28:18934413-18934082 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 11 |
| Conread position: | 4-178 |
| Cow position: | chr28:5188443-5188622 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 15, 94 |
| Conread position: | 4-320 |
| Cow position: | chr28:17738113-17738441 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 240 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 15, 282 |
| Conread position: | 4-332 |
| Cow position: | chr28:21355184-21354849 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 68 |
| Conread position: | 6-311 |
| Cow position: | chr28:10745171-10744848 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 234 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 6-354 |
| Cow position: | chr28:30978232-30977890 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 54 |
| Conread position: | 9-216 |
| Cow position: | chr28:15688996-15688782 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 10, 98 |
| Conread position: | 12-184 |
| Cow position: | chr28:11007143-11006950 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 15-217 |
| Cow position: | chr28:2862814-2862601 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 16-250 |
| Cow position: | chr28:16350107-16350336 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 114, 35 |
| Conread position: | 27-209 |
| Cow position: | chr28:4938768-4938586 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 102, 84 |
Show alignments to all cow chromosomes.