Cow genome map
| Conread name: | rptbr0110_c8.y1 |
| Conread position: | 1-161 |
| Cow position: | chr29:709163-709332 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 1-198 |
| Cow position: | chr29:44135503-44135709 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 18, 192 |
| Conread position: | 1-214 |
| Cow position: | chr29:13634344-13634564 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 23, 60 |
| Conread position: | 1-216 |
| Cow position: | chr29:11634778-11634556 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 51, 20 |
| Conread position: | 1-216 |
| Cow position: | chr29:21925167-21924944 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 1-220 |
| Cow position: | chr29:36404779-36404547 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 171 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 1-264 |
| Cow position: | chr29:7407931-7408206 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 38 |
| Conread position: | 1-331 |
| Cow position: | chr29:32655476-32655823 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 248 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 18, 76 |
| Conread position: | 1-343 |
| Cow position: | chr29:11071741-11072081 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 219 |
| Conread position: | 1-352 |
| Cow position: | chr29:18072891-18072537 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 11 |
| Conread position: | 2-186 |
| Cow position: | chr29:24103590-24103784 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 55, 41 |
| Conread position: | 2-198 |
| Cow position: | chr29:29769395-29769594 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 22, 116 |
| Conread position: | 2-211 |
| Cow position: | chr29:19338943-19338718 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 2-311 |
| Cow position: | chr29:13639415-13639717 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 22, 10 |
| Conread position: | 2-328 |
| Cow position: | chr29:26615766-26616114 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 247 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 17, 335 |
| Conread position: | 2-332 |
| Cow position: | chr29:6925967-6925636 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 11 |
| Conread position: | 2-333 |
| Cow position: | chr29:12004805-12005148 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 245 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 22, 314 |
| Conread position: | 4-214 |
| Cow position: | chr29:26129455-26129235 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 58, 150 |
| Conread position: | 4-346 |
| Cow position: | chr29:26335422-26335773 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 235 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 15, 84 |
| Conread position: | 5-143 |
| Cow position: | chr29:35442508-35442652 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 113 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 5-198 |
| Cow position: | chr29:2274879-2275081 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 14, 66 |
| Conread position: | 5-345 |
| Cow position: | chr29:650232-649873 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 330 |
| Conread position: | 5-345 |
| Cow position: | chr29:12451329-12450990 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 77 |
| Conread position: | 6-188 |
| Cow position: | chr29:6472267-6472078 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 6-199 |
| Cow position: | chr29:23984006-23984213 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 17-310 |
| Cow position: | chr29:26519521-26519822 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 35, 103 |
| Conread position: | 18-345 |
| Cow position: | chr29:1612636-1612965 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 52 |
| Conread position: | 27-357 |
| Cow position: | chr29:37719841-37719504 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 62 |
Show alignments to all cow chromosomes.