Cow genome map

Conread name: rptbr0110_c8.y1

Conread position: 1-158
Cow position:
Alignm length: 169
Alignm identity: 127
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 18, 0

Conread position: 1-199
Cow position:
Alignm length: 208
Alignm identity: 158
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 19, 0

Conread position: 1-204
Cow position:
Alignm length: 212
Alignm identity: 163
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 18, 0

Conread position: 1-205
Cow position:
Alignm length: 214
Alignm identity: 164
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 18, 45

Conread position: 1-209
Cow position:
Alignm length: 217
Alignm identity: 164
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 23, 123

Conread position: 1-210
Cow position:
Alignm length: 225
Alignm identity: 163
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 18, 98

Conread position: 1-216
Cow position:
Alignm length: 228
Alignm identity: 175
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 61, 15

Conread position: 1-216
Cow position:
Alignm length: 233
Alignm identity: 176
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 18, 0

Conread position: 1-239
Cow position:
Alignm length: 258
Alignm identity: 191
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 18, 0

Conread position: 1-252
Cow position:
Alignm length: 275
Alignm identity: 200
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 18, 171

Conread position: 1-310
Cow position:
Alignm length: 319
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 20

Conread position: 1-320
Cow position:
Alignm length: 337
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 213

Conread position: 1-324
Cow position:
Alignm length: 351
Alignm identity: 252
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 18, 313

Conread position: 1-341
Cow position:
Alignm length: 374
Alignm identity: 272
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 60, 73

Conread position: 1-345
Cow position:
Alignm length: 352
Alignm identity: 247
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 15, 94

Conread position: 1-353
Cow position:
Alignm length: 375
Alignm identity: 259
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 18, 320

Conread position: 1-418
Cow position:
Alignm length: 435
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 326

Conread position: 2-141
Cow position:
Alignm length: 147
Alignm identity: 116
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 17, 0

Conread position: 2-182
Cow position:
Alignm length: 186
Alignm identity: 142
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 14, 58

Conread position: 2-212
Cow position:
Alignm length: 219
Alignm identity: 159
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 14, 0

Conread position: 2-216
Cow position:
Alignm length: 223
Alignm identity: 169
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 60, 38

Conread position: 2-217
Cow position:
Alignm length: 226
Alignm identity: 165
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 14, 0

Conread position: 2-220
Cow position:
Alignm length: 225
Alignm identity: 158
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 17, 57

Conread position: 2-298
Cow position:
Alignm length: 301
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 6

Conread position: 2-305
Cow position:
Alignm length: 318
Alignm identity: 221
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 17, 190

Conread position: 2-307
Cow position:
Alignm length: 311
Alignm identity: 206
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 43, 183

Conread position: 2-332
Cow position:
Alignm length: 342
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 62

Conread position: 2-340
Cow position:
Alignm length: 345
Alignm identity: 238
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 23, 10

Conread position: 3-212
Cow position:
Alignm length: 222
Alignm identity: 165
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 16, 0

Conread position: 3-213
Cow position:
Alignm length: 225
Alignm identity: 164
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 16, 0

Conread position: 3-238
Cow position:
Alignm length: 246
Alignm identity: 173
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 66, 0

Conread position: 3-346
Cow position:
Alignm length: 358
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 11

Conread position: 3-368
Cow position:
Alignm length: 384
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 318

Conread position: 4-157
Cow position:
Alignm length: 158
Alignm identity: 119
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 20, 70

Conread position: 4-220
Cow position:
Alignm length: 227
Alignm identity: 173
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 15, 133

Conread position: 4-311
Cow position:
Alignm length: 322
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 12

Conread position: 4-345
Cow position:
Alignm length: 355
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 195

Conread position: 4-353
Cow position:
Alignm length: 370
Alignm identity: 260
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 15, 22

Conread position: 5-310
Cow position:
Alignm length: 319
Alignm identity: 231
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 47, 93

Conread position: 5-344
Cow position:
Alignm length: 350
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 82

Conread position: 6-184
Cow position:
Alignm length: 193
Alignm identity: 140
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 13, 57

Conread position: 6-217
Cow position:
Alignm length: 222
Alignm identity: 160
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 13, 0

Conread position: 6-332
Cow position:
Alignm length: 345
Alignm identity: 246
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 13, 324

Conread position: 6-344
Cow position:
Alignm length: 343
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 23

Conread position: 7-273
Cow position:
Alignm length: 290
Alignm identity: 203
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 12, 78

Conread position: 8-413
Cow position:
Alignm length: 432
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 97

Conread position: 10-214
Cow position:
Alignm length: 210
Alignm identity: 160
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 9, 83

Conread position: 10-345
Cow position:
Alignm length: 354
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 288

Conread position: 17-329
Cow position:
Alignm length: 322
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 304

Conread position: 18-329
Cow position:
Alignm length: 345
Alignm identity: 241
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 38, 85

Conread position: 18-356
Cow position:
Alignm length: 365
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 281

Conread position: 27-337
Cow position:
Alignm length: 326
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 298

Conread position: 27-345
Cow position:
Alignm length: 332
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 295

Show alignments to all cow chromosomes.