Cow genome map

Conread name: rptbr0110_c8.y1

Conread position: 1-118
Cow position: chr4:23758756-23758634 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 1-126
Cow position: chr4:41154596-41154466 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 1-158
Cow position: chr4:39767302-39767133 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 126
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 1-165
Cow position: chr4:36945245-36945411 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 128
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 18, 82

Conread position: 1-199
Cow position: chr4:27371911-27372111 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 154
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 11, 65

Conread position: 1-204
Cow position: chr4:31172626-31172406 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 171
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 18, 0

Conread position: 1-204
Cow position: chr4:68795345-68795565 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 159
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 15, 0

Conread position: 1-213
Cow position: chr4:33030500-33030292 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 158
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 18, 112

Conread position: 1-216
Cow position: chr4:46082941-46083168 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 168
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 66, 37

Conread position: 1-219
Cow position: chr4:22115559-22115331 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 174
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 18, 0

Conread position: 1-244
Cow position: chr4:37827897-37828140 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 182
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 23, 98

Conread position: 1-326
Cow position: chr4:15635498-15635825 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 229
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 18, 73

Conread position: 1-330
Cow position: chr4:11201769-11201434 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 106

Conread position: 1-337
Cow position: chr4:8650185-8649855 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 15

Conread position: 1-346
Cow position: chr4:25972848-25972497 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 166

Conread position: 1-347
Cow position: chr4:19307211-19306854 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 326

Conread position: 1-354
Cow position: chr4:23381859-23382214 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 15

Conread position: 1-362
Cow position: chr4:23311306-23311673 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 205

Conread position: 2-170
Cow position: chr4:13222233-13222400 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 14, 89

Conread position: 2-191
Cow position: chr4:9912679-9912484 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 150
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 17, 162

Conread position: 2-217
Cow position: chr4:5999242-5999467 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 169
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 18, 10

Conread position: 2-220
Cow position: chr4:21874760-21874552 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 160
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 22, 50

Conread position: 2-248
Cow position: chr4:45662559-45662807 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 187
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 22, 78

Conread position: 2-302
Cow position: chr4:23646896-23647203 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 49

Conread position: 2-332
Cow position: chr4:27540564-27540233 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 42

Conread position: 2-345
Cow position: chr4:39009915-39009568 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 10

Conread position: 2-353
Cow position: chr4:47730805-47730463 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 63

Conread position: 2-358
Cow position: chr4:1237165-1237516 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 225
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 13, 97

Conread position: 2-358
Cow position: chr4:36813322-36812972 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 24

Conread position: 2-401
Cow position: chr4:11901612-11902012 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 10

Conread position: 2-464
Cow position: chr4:33357884-33357417 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 314
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 14, 152

Conread position: 3-332
Cow position: chr4:61391256-61391587 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 238
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 47, 151

Conread position: 3-344
Cow position: chr4:28377712-28378043 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 67

Conread position: 4-267
Cow position: chr4:12049193-12048922 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 191
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 12, 158

Conread position: 4-348
Cow position: chr4:38181627-38181289 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 203

Conread position: 6-264
Cow position: chr4:42266806-42267062 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 189
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 13, 90

Conread position: 15-212
Cow position: chr4:27530053-27529845 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 150
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 37, 0

Conread position: 15-337
Cow position: chr4:27292020-27292352 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 243
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 37, 134

Conread position: 18-282
Cow position: chr4:49158851-49159108 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 186
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 27, 118

Conread position: 19-346
Cow position: chr4:12697572-12697242 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 59

Conread position: 20-273
Cow position: chr4:10412306-10412050 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 191
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 28, 51

Conread position: 20-327
Cow position: chr4:42673105-42672788 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 53

Conread position: 21-337
Cow position: chr4:35930362-35930038 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 258

Conread position: 27-287
Cow position: chr4:42423877-42424146 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 203
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 25, 34

Show alignments to all cow chromosomes.