Cow genome map

Conread name: rptbr0110_c8.y1

Conread position: 1-198
Cow position:
Alignm length: 204
Alignm identity: 144
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 18, 90

Conread position: 1-199
Cow position:
Alignm length: 212
Alignm identity: 158
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 18, 0

Conread position: 1-204
Cow position:
Alignm length: 217
Alignm identity: 169
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 18, 0

Conread position: 1-204
Cow position:
Alignm length: 214
Alignm identity: 164
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 18, 161

Conread position: 1-216
Cow position:
Alignm length: 225
Alignm identity: 162
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 18, 59

Conread position: 1-216
Cow position:
Alignm length: 224
Alignm identity: 174
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 18, 97

Conread position: 1-252
Cow position:
Alignm length: 268
Alignm identity: 184
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 23, 159

Conread position: 1-258
Cow position:
Alignm length: 274
Alignm identity: 202
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 51, 15

Conread position: 1-291
Cow position:
Alignm length: 303
Alignm identity: 218
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 6, 94

Conread position: 1-292
Cow position:
Alignm length: 303
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 1-297
Cow position:
Alignm length: 306
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 123

Conread position: 1-330
Cow position:
Alignm length: 347
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 194

Conread position: 1-332
Cow position:
Alignm length: 344
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 105

Conread position: 1-344
Cow position:
Alignm length: 351
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 40

Conread position: 1-346
Cow position:
Alignm length: 352
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 66

Conread position: 1-346
Cow position:
Alignm length: 366
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 15

Conread position: 1-397
Cow position:
Alignm length: 415
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 327

Conread position: 2-148
Cow position:
Alignm length: 155
Alignm identity: 123
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 17, 0

Conread position: 2-181
Cow position:
Alignm length: 192
Alignm identity: 150
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 17, 0

Conread position: 2-184
Cow position:
Alignm length: 191
Alignm identity: 136
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 23, 49

Conread position: 2-195
Cow position:
Alignm length: 207
Alignm identity: 147
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 14, 185

Conread position: 2-207
Cow position:
Alignm length: 218
Alignm identity: 164
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 22, 106

Conread position: 2-212
Cow position:
Alignm length: 225
Alignm identity: 163
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 17, 0

Conread position: 2-284
Cow position:
Alignm length: 296
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 168

Conread position: 2-329
Cow position:
Alignm length: 338
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 121

Conread position: 2-331
Cow position:
Alignm length: 337
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 114

Conread position: 2-331
Cow position:
Alignm length: 348
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 19

Conread position: 2-331
Cow position:
Alignm length: 355
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 333

Conread position: 2-331
Cow position:
Alignm length: 338
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 72

Conread position: 2-332
Cow position:
Alignm length: 344
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 10

Conread position: 2-332
Cow position:
Alignm length: 340
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 10

Conread position: 2-332
Cow position:
Alignm length: 344
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 49

Conread position: 2-337
Cow position:
Alignm length: 348
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 263

Conread position: 2-340
Cow position:
Alignm length: 348
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 317

Conread position: 2-340
Cow position:
Alignm length: 356
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 10

Conread position: 2-340
Cow position:
Alignm length: 350
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 2-343
Cow position:
Alignm length: 352
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 82

Conread position: 2-345
Cow position:
Alignm length: 360
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 40

Conread position: 3-194
Cow position:
Alignm length: 203
Alignm identity: 151
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 16, 0

Conread position: 3-216
Cow position:
Alignm length: 227
Alignm identity: 172
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 16, 147

Conread position: 3-286
Cow position:
Alignm length: 295
Alignm identity: 203
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 16, 187

Conread position: 3-325
Cow position:
Alignm length: 336
Alignm identity: 229
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 16, 125

Conread position: 3-333
Cow position:
Alignm length: 360
Alignm identity: 258
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 13, 120

Conread position: 4-324
Cow position:
Alignm length: 341
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 334

Conread position: 4-332
Cow position:
Alignm length: 344
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 323

Conread position: 4-354
Cow position:
Alignm length: 365
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 228

Conread position: 5-346
Cow position:
Alignm length: 352
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 28

Conread position: 6-186
Cow position:
Alignm length: 190
Alignm identity: 138
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 13, 0

Conread position: 6-189
Cow position:
Alignm length: 194
Alignm identity: 142
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 10, 58

Conread position: 6-198
Cow position:
Alignm length: 201
Alignm identity: 147
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 10, 96

Conread position: 6-332
Cow position:
Alignm length: 337
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 68

Conread position: 15-255
Cow position:
Alignm length: 247
Alignm identity: 178
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 30, 0

Conread position: 15-332
Cow position:
Alignm length: 336
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 263

Conread position: 16-216
Cow position:
Alignm length: 209
Alignm identity: 152
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 36, 75

Conread position: 16-344
Cow position:
Alignm length: 351
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 300

Conread position: 16-345
Cow position:
Alignm length: 344
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 10

Conread position: 18-216
Cow position:
Alignm length: 215
Alignm identity: 155
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 34, 0

Conread position: 18-300
Cow position:
Alignm length: 294
Alignm identity: 214
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 85, 226

Show alignments to all cow chromosomes.