Cow genome map


           Conread name:
           rptbr0132_e10.y1
        

               Conread position:
               185-385
               

               Cow position:
               chr11:20230086-20230282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               119, 22
               

               Conread position:
               195-385
               

               Cow position:
               chr11:24938785-24938981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               132, 11
               

               Conread position:
               195-385
               

               Cow position:
               chr11:45805781-45805588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               161, 13
               

               Conread position:
               203-373
               

               Cow position:
               chr11:41461670-41461500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               139
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               206-378
               

               Cow position:
               chr11:71353891-71353727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               214-373
               

               Cow position:
               chr11:56334110-56333953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               112, 55
               

               Conread position:
               229-385
               

               Cow position:
               chr11:52942527-52942369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               141, 36
               

               Conread position:
               271-385
               

               Cow position:
               chr11:51159171-51159053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               99, 48
               
Show alignments to all cow chromosomes.