Cow genome map


           Conread name:
           rptbr0132_e10.y1
        

               Conread position:
               193-373
               

               Cow position:
               chr13:27235813-27235989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               128
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               195-297
               

               Cow position:
               chr13:47682372-47682473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               85
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               195-373
               

               Cow position:
               chr13:53198649-53198825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               136
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               195-384
               

               Cow position:
               chr13:15079001-15079194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               173, 70
               

               Conread position:
               195-385
               

               Cow position:
               chr13:52393048-52393233 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               151, 11
               

               Conread position:
               196-385
               

               Cow position:
               chr13:34804970-34804787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               209-373
               

               Cow position:
               chr13:1916877-1916714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               212-335
               

               Cow position:
               chr13:50582032-50581909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               96
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               229-373
               

               Cow position:
               chr13:17618417-17618564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               256-373
               

               Cow position:
               chr13:40873718-40873601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               91
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.