Cow genome map
| Conread name: | rptbr0132_e10.y1 |
| Conread position: | 164-358 |
| Cow position: | chr3:42471194-42471382 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 188-385 |
| Cow position: | chr3:55993044-55992843 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 180, 66 |
| Conread position: | 193-385 |
| Cow position: | chr3:27371365-27371557 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 170, 15 |
| Conread position: | 195-373 |
| Cow position: | chr3:24549351-24549528 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 195-385 |
| Cow position: | chr3:64159431-64159241 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 161, 11 |
| Conread position: | 195-394 |
| Cow position: | chr3:16133089-16132890 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 123, 35 |
| Conread position: | 198-373 |
| Cow position: | chr3:66460227-66460399 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 199-352 |
| Cow position: | chr3:762403-762250 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 120 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 199-378 |
| Cow position: | chr3:49356153-49356329 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 146 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 165, 0 |
| Conread position: | 202-373 |
| Cow position: | chr3:25167662-25167491 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 208-378 |
| Cow position: | chr3:33631239-33631073 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 208-385 |
| Cow position: | chr3:3516628-3516803 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 209-385 |
| Cow position: | chr3:66617003-66616822 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 150, 0 |
| Conread position: | 210-341 |
| Cow position: | chr3:21940949-21941078 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 210-385 |
| Cow position: | chr3:20916018-20915837 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 151 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 146, 167 |
| Conread position: | 221-385 |
| Cow position: | chr3:46931205-46931376 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 226-367 |
| Cow position: | chr3:64205388-64205529 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 226-394 |
| Cow position: | chr3:67656124-67655955 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 70, 15 |
| Conread position: | 266-359 |
| Cow position: | chr3:42567321-42567415 (view UCSC Genome Browser custom track) |
| Alignm length: | 95 |
| Alignm identity: | 81 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 68, 0 |
Show alignments to all cow chromosomes.