Cow genome map


           Conread name:
           rptbr0132_e10.y1
        

               Conread position:
               142-342
               

               Cow position:
               chr6:854204-854405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               38, 67
               

               Conread position:
               178-386
               

               Cow position:
               chr6:36269661-36269864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               182-326
               

               Cow position:
               chr6:35742904-35743044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               109
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               188-385
               

               Cow position:
               chr6:17451728-17451928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               182, 22
               

               Conread position:
               197-385
               

               Cow position:
               chr6:33798770-33798586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               198-385
               

               Cow position:
               chr6:50464602-50464413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               47, 8
               

               Conread position:
               208-360
               

               Cow position:
               chr6:26375747-26375899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               122
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               73, 10
               

               Conread position:
               208-373
               

               Cow position:
               chr6:39796446-39796282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               141, 0
               

               Conread position:
               208-381
               

               Cow position:
               chr6:34836445-34836613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               208-385
               

               Cow position:
               chr6:6354352-6354176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               161, 57
               
Show alignments to all cow chromosomes.