Cow genome map


           Conread name:
           rptbr0132_e10.y1
        

               Conread position:
               195-378
               

               Cow position:
               chr9:17557877-17558050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               195-385
               

               Cow position:
               chr9:17011516-17011331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               198-367
               

               Cow position:
               chr9:21644431-21644263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               46, 8
               

               Conread position:
               198-373
               

               Cow position:
               chr9:44342371-44342198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               199-373
               

               Cow position:
               chr9:11426335-11426167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               199-373
               

               Cow position:
               chr9:58587440-58587612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               144, 0
               

               Conread position:
               230-385
               

               Cow position:
               chr9:33538485-33538328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               141, 97
               
Show alignments to all cow chromosomes.