Cow genome map

Conread name: rpty601b_h3.y1

Conread position: 1-130
Cow position: chr21:724884-724749 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 109
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 32, 99

Conread position: 1-130
Cow position: chr21:44515265-44515400 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 26, 0

Conread position: 1-144
Cow position: chr21:42540222-42540072 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 1-145
Cow position: chr21:16187807-16187656 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 30, 0

Conread position: 1-156
Cow position: chr21:20183073-20183233 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 32, 0

Conread position: 1-161
Cow position: chr21:28442744-28442899 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 133, 18

Conread position: 1-185
Cow position: chr21:36297492-36297683 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 138
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 30, 176

Conread position: 1-191
Cow position: chr21:33350742-33350938 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 142
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 34, 0

Conread position: 1-191
Cow position: chr21:35437477-35437292 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 139
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 29, 0

Conread position: 1-192
Cow position: chr21:27624711-27624895 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 139
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 183, 18

Conread position: 1-192
Cow position: chr21:29484981-29485174 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 149
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 30, 104

Conread position: 1-192
Cow position: chr21:30250194-30250008 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 139
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 96, 0

Conread position: 1-220
Cow position: chr21:28599891-28600109 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 164
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 33, 13

Conread position: 1-238
Cow position: chr21:829210-828967 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 181
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 29, 148

Conread position: 1-244
Cow position: chr21:7825175-7824941 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 175
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 137, 17

Conread position: 1-244
Cow position: chr21:10561582-10561336 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 172
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 26, 88

Conread position: 1-248
Cow position: chr21:22861001-22861245 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 185
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 33, 124

Conread position: 1-253
Cow position: chr21:42135618-42135361 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 187
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 29, 175

Conread position: 1-253
Cow position: chr21:46599361-46599616 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 188
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 33, 149

Conread position: 1-256
Cow position: chr21:29069327-29069061 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 1-257
Cow position: chr21:17875189-17874928 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 178
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 27, 146

Conread position: 1-257
Cow position: chr21:32297506-32297246 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 187
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 179, 31

Conread position: 1-257
Cow position: chr21:41522405-41522151 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 186
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 27, 52

Conread position: 1-257
Cow position: chr21:46264173-46264453 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 199
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 31, 63

Conread position: 1-258
Cow position: chr21:28030290-28030542 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 197
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 22, 40

Conread position: 1-259
Cow position: chr21:8349330-8349586 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 187
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 30, 103

Conread position: 1-259
Cow position: chr21:14126289-14126536 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 185
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 33, 49

Conread position: 1-259
Cow position: chr21:37640559-37640831 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 186
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 28, 153

Conread position: 1-261
Cow position: chr21:71587-71852 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 197
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 28, 140

Conread position: 1-262
Cow position: chr21:37299460-37299727 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 203
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 23, 218

Conread position: 1-262
Cow position: chr21:41590564-41590299 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 13

Conread position: 1-262
Cow position: chr21:44825889-44825608 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 199
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 28, 223

Conread position: 1-263
Cow position: chr21:32559359-32559103 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 200
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 23, 18

Conread position: 1-264
Cow position: chr21:24858315-24858585 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 193
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 35, 0

Conread position: 1-266
Cow position: chr21:641588-641856 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 202
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 30, 162

Conread position: 1-266
Cow position: chr21:16604316-16604044 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 178
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 26, 152

Conread position: 1-266
Cow position: chr21:19060085-19059818 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 189
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 23, 59

Conread position: 1-270
Cow position: chr21:82081-82335 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 197
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 251, 31

Conread position: 1-277
Cow position: chr21:29214157-29213878 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 211
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 22, 13

Conread position: 1-277
Cow position: chr21:48234160-48233892 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 190
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 45, 99

Conread position: 1-279
Cow position: chr21:8426448-8426731 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 163

Conread position: 1-284
Cow position: chr21:45835400-45835097 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 214
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 30, 186

Conread position: 1-285
Cow position: chr21:7394283-7393981 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 208
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 43, 100

Conread position: 1-309
Cow position: chr21:12354693-12354389 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 216
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 25, 111

Conread position: 2-182
Cow position: chr21:22465200-22465376 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 126
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 2-187
Cow position: chr21:26244921-26245107 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 132
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 29, 0

Conread position: 2-192
Cow position: chr21:5392535-5392341 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 148
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 28, 171

Conread position: 2-192
Cow position: chr21:7581899-7581709 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 136
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 34, 159

Conread position: 2-192
Cow position: chr21:36909938-36910129 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 132
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 34, 144

Conread position: 2-246
Cow position: chr21:31691485-31691723 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 181
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 27, 104

Conread position: 2-253
Cow position: chr21:22210241-22209985 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 178
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 21, 0

Conread position: 2-257
Cow position: chr21:3585364-3585102 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 177
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 21, 11

Conread position: 2-257
Cow position: chr21:13585051-13584790 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 178
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 155, 68

Conread position: 2-259
Cow position: chr21:20152957-20153222 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 178
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 27, 151

Conread position: 2-259
Cow position: chr21:30592304-30592049 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 189
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 29, 81

Conread position: 2-260
Cow position: chr21:15584417-15584156 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 177
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 21, 150

Conread position: 2-261
Cow position: chr21:41621127-41621395 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 184
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 27, 139

Conread position: 2-262
Cow position: chr21:802304-802055 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 196
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 222, 30

Conread position: 2-262
Cow position: chr21:938031-938289 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 178
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 161, 16

Conread position: 2-262
Cow position: chr21:12104367-12104620 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 194
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 33, 154

Conread position: 2-262
Cow position: chr21:46849124-46848865 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 178
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 19, 93

Conread position: 2-264
Cow position: chr21:5898392-5898140 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 177
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 5, 27

Conread position: 2-264
Cow position: chr21:6713523-6713255 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 193
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 27, 107

Conread position: 2-265
Cow position: chr21:32339734-32339475 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 186
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 40, 159

Conread position: 2-267
Cow position: chr21:957675-957944 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 188
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 28, 93

Conread position: 2-268
Cow position: chr21:23980177-23979906 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 178
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 27, 141

Conread position: 2-268
Cow position: chr21:44724362-44724097 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 190
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 27, 35

Conread position: 2-270
Cow position: chr21:36508244-36508504 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 183
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 27, 93

Conread position: 2-283
Cow position: chr21:20160681-20160967 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 196
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 28, 230

Conread position: 2-293
Cow position: chr21:23672753-23673046 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 201
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 28, 84

Conread position: 3-257
Cow position: chr21:6834054-6834312 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 171
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 26, 132

Conread position: 3-261
Cow position: chr21:21900595-21900327 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 185
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 21, 141

Conread position: 3-262
Cow position: chr21:977139-976871 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 180
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 144, 0

Conread position: 3-262
Cow position: chr21:34654079-34654337 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 72

Conread position: 3-270
Cow position: chr21:33982802-33982539 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 199
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 27, 98

Conread position: 4-192
Cow position: chr21:11057870-11057683 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 136
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 21, 95

Conread position: 4-257
Cow position: chr21:31253549-31253796 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 173
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 173, 29

Conread position: 7-247
Cow position: chr21:17519036-17519280 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 172
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 148, 15

Conread position: 7-264
Cow position: chr21:9477175-9477436 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 179
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 22, 73

Conread position: 7-267
Cow position: chr21:29658287-29658549 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 177
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 27, 113

Conread position: 8-299
Cow position: chr21:17183932-17184227 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 203
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 59, 35

Conread position: 9-247
Cow position: chr21:20213760-20213519 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 164
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 141, 25

Conread position: 11-284
Cow position: chr21:19702746-19703021 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 196
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 15, 137

Conread position: 12-264
Cow position: chr21:6051519-6051774 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 179
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 24, 0

Conread position: 13-264
Cow position: chr21:11678278-11678053 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 180
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 21, 0

Conread position: 13-264
Cow position: chr21:17403834-17403575 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 176
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 16, 134

Conread position: 13-268
Cow position: chr21:47061-47323 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 182
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 142, 7

Conread position: 14-199
Cow position: chr21:18800520-18800331 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 134
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 26, 144

Conread position: 15-282
Cow position: chr21:22850943-22851199 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 17-191
Cow position: chr21:12801725-12801550 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 127
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 10, 16

Conread position: 17-220
Cow position: chr21:7768463-7768660 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 145
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 15, 0

Conread position: 17-247
Cow position: chr21:8431077-8430845 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 156
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 9, 21

Conread position: 17-247
Cow position: chr21:20165665-20165891 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 154
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 81, 0

Conread position: 17-261
Cow position: chr21:11740097-11739854 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 180
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 12, 105

Conread position: 17-262
Cow position: chr21:23586906-23587139 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 168
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 11, 0

Conread position: 17-264
Cow position: chr21:12461943-12461696 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 177
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 108, 17

Conread position: 17-264
Cow position: chr21:16152463-16152709 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 165
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 72, 136

Conread position: 17-264
Cow position: chr21:20163731-20163978 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 186
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 155, 169

Conread position: 17-265
Cow position: chr21:28733889-28733642 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 166
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 170, 66

Conread position: 17-266
Cow position: chr21:10423131-10423383 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 168
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 132, 117

Conread position: 17-274
Cow position: chr21:14027082-14027345 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 178
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 16, 125

Conread position: 19-247
Cow position: chr21:11625766-11625998 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 160
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 11, 127

Conread position: 19-253
Cow position: chr21:24875377-24875610 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 177
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 72, 141

Conread position: 19-261
Cow position: chr21:10009799-10009548 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 176
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 11, 139

Conread position: 19-264
Cow position: chr21:10978921-10978678 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 167
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 158, 13

Conread position: 20-165
Cow position: chr21:38121127-38121272 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 20-192
Cow position: chr21:13365369-13365540 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 123
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 63, 0

Conread position: 20-218
Cow position: chr21:36149482-36149685 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 148
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 9, 129

Conread position: 20-246
Cow position: chr21:41287766-41287545 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 167
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 14, 0

Conread position: 20-250
Cow position: chr21:37789974-37789747 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 154
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 15, 128

Conread position: 20-253
Cow position: chr21:47363709-47363466 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 171
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 60, 14

Conread position: 20-259
Cow position: chr21:17890330-17890568 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 162
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 114, 12

Conread position: 20-261
Cow position: chr21:41155891-41156139 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 168
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 73, 130

Conread position: 20-262
Cow position: chr21:7169714-7169955 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 164
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 232, 136

Conread position: 20-263
Cow position: chr21:868898-868651 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 175
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 157, 0

Conread position: 20-264
Cow position: chr21:38449418-38449183 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 176
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 14, 0

Conread position: 20-266
Cow position: chr21:18155540-18155291 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 167
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 135, 127

Conread position: 20-268
Cow position: chr21:38900799-38901034 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 171
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 18, 102

Conread position: 20-268
Cow position: chr21:47713976-47713731 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 183
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 160, 12

Conread position: 20-300
Cow position: chr21:10004859-10004577 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 194
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 153, 82

Conread position: 21-171
Cow position: chr21:12723182-12723328 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 40, 26

Conread position: 21-247
Cow position: chr21:21686442-21686669 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 163
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 8, 57

Conread position: 21-261
Cow position: chr21:643353-643590 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 184
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 212, 13

Conread position: 21-276
Cow position: chr21:44214155-44214392 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 182
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 13, 0

Conread position: 22-171
Cow position: chr21:41046835-41046983 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 67, 0

Conread position: 22-176
Cow position: chr21:45262782-45262628 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 22-187
Cow position: chr21:30980549-30980385 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 129
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 9, 13

Conread position: 22-211
Cow position: chr21:9990538-9990727 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 143
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 13, 28

Conread position: 22-246
Cow position: chr21:19240845-19240627 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 165
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 147, 0

Conread position: 22-247
Cow position: chr21:23568253-23568477 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 158
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 55, 12

Conread position: 22-250
Cow position: chr21:20260289-20260042 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 181
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 127, 11

Conread position: 22-253
Cow position: chr21:47383531-47383291 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 178
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 75, 161

Conread position: 22-256
Cow position: chr21:17252950-17252716 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 67

Conread position: 22-263
Cow position: chr21:36763085-36763331 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 173
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 16, 151

Conread position: 22-264
Cow position: chr21:7673150-7673382 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 171
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 11, 76

Conread position: 22-264
Cow position: chr21:37706386-37706140 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 168
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 113, 12

Conread position: 22-264
Cow position: chr21:42841569-42841316 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 175
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 136, 0

Conread position: 22-268
Cow position: chr21:19196136-19195888 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 169
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 113, 118

Conread position: 22-298
Cow position: chr21:37479983-37480264 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 207
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 84, 157

Conread position: 23-259
Cow position: chr21:10264062-10264300 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 169
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 111, 116

Conread position: 23-260
Cow position: chr21:9418126-9417879 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 172
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 150, 74

Conread position: 23-261
Cow position: chr21:8713931-8713689 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 163
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 12, 25

Conread position: 23-307
Cow position: chr21:29002125-29001830 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 205
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 57, 11

Conread position: 24-257
Cow position: chr21:14452264-14452495 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 166
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 110, 115

Conread position: 24-257
Cow position: chr21:42328633-42328399 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 163
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 109, 8

Conread position: 24-259
Cow position: chr21:24797687-24797919 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 164
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 69, 0

Conread position: 24-263
Cow position: chr21:16498550-16498783 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 179
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 10, 0

Conread position: 24-264
Cow position: chr21:28919493-28919260 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 164
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 227, 106

Conread position: 24-264
Cow position: chr21:40266155-40266395 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 175
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 56, 62

Conread position: 24-264
Cow position: chr21:48334760-48334516 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 175
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 177, 32

Conread position: 24-266
Cow position: chr21:24343238-24342992 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 164
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 5, 124

Conread position: 24-283
Cow position: chr21:6997971-6998230 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 183
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 45, 10

Conread position: 25-263
Cow position: chr21:18059931-18059690 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 168
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 9, 119

Conread position: 26-257
Cow position: chr21:5970807-5970584 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 160
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 40, 119

Conread position: 26-264
Cow position: chr21:38918235-38918473 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 167
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 7, 53

Conread position: 26-268
Cow position: chr21:26563128-26562886 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 165
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 101, 45

Conread position: 27-257
Cow position: chr21:13656603-13656372 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 159
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 105, 120

Conread position: 27-260
Cow position: chr21:22014224-22014456 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 163
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 150, 7

Conread position: 27-261
Cow position: chr21:27569136-27568893 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 182
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 146, 69

Conread position: 28-256
Cow position: chr21:46809737-46809503 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 167
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 45, 117

Conread position: 28-259
Cow position: chr21:13842523-13842757 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 160
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 107, 112

Conread position: 28-264
Cow position: chr21:13048159-13047919 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 160
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 128, 119

Conread position: 28-264
Cow position: chr21:42501078-42501321 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 164
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 43, 118

Conread position: 28-266
Cow position: chr21:10858842-10859083 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 162
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 128, 65

Conread position: 28-284
Cow position: chr21:36177193-36177454 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 174
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 166, 119

Conread position: 33-261
Cow position: chr21:9301256-9301493 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 165
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 39, 117

Conread position: 33-261
Cow position: chr21:17559890-17559648 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 169
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 26, 117

Conread position: 33-268
Cow position: chr21:22005870-22005629 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 169
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 26, 112

Conread position: 34-161
Cow position: chr21:7088640-7088768 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 97
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 118, 0

Conread position: 34-249
Cow position: chr21:30231654-30231442 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 151
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 150, 100

Conread position: 34-250
Cow position: chr21:30835406-30835621 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 153
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 139, 41

Conread position: 34-253
Cow position: chr21:14464620-14464844 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 156
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 73, 109

Conread position: 34-256
Cow position: chr21:36696050-36695829 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 155
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 100, 105

Conread position: 34-258
Cow position: chr21:47719259-47719041 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 168
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 215, 88

Conread position: 34-259
Cow position: chr21:11644926-11644702 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 169
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 133, 0

Conread position: 34-259
Cow position: chr21:19868914-19868697 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 171
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 218, 13

Conread position: 34-262
Cow position: chr21:26018419-26018648 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 159
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 99, 92

Conread position: 34-262
Cow position: chr21:36682365-36682593 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 167
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 173, 133

Conread position: 34-262
Cow position: chr21:39393788-39394018 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 177
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 110, 134

Conread position: 34-263
Cow position: chr21:8241952-8242183 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 157
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 28, 19

Conread position: 34-263
Cow position: chr21:42144866-42145089 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 163
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 116, 46

Conread position: 34-264
Cow position: chr21:27677522-27677753 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 163
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 142, 38

Conread position: 34-265
Cow position: chr21:24598698-24598913 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 164
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 44, 68

Conread position: 34-265
Cow position: chr21:47465078-47464849 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 167
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 85, 0

Conread position: 34-268
Cow position: chr21:28244511-28244742 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 160
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 217, 36

Conread position: 34-269
Cow position: chr21:21169452-21169223 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 161
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 138, 59

Conread position: 34-270
Cow position: chr21:41610207-41610460 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 172
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 94, 0

Conread position: 34-272
Cow position: chr21:30222385-30222621 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 178
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 218, 125

Conread position: 34-273
Cow position: chr21:21615822-21616055 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 179
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 215, 135

Conread position: 34-315
Cow position: chr21:23535751-23536032 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 199
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 101, 24

Conread position: 35-262
Cow position: chr21:742328-742541 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 173
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 45, 0

Conread position: 35-264
Cow position: chr21:6851213-6851435 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 172
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 217, 131

Conread position: 35-269
Cow position: chr21:27229750-27229529 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 172
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 61, 0

Conread position: 35-312
Cow position: chr21:40589443-40589163 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 178
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 31, 49

Conread position: 36-197
Cow position: chr21:33210230-33210392 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 117
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 153, 0

Conread position: 36-261
Cow position: chr21:13580455-13580683 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 162
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 98, 108

Conread position: 36-262
Cow position: chr21:12339683-12339884 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 169
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 41, 0

Conread position: 36-268
Cow position: chr21:13674610-13674379 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 159
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 99, 108

Conread position: 36-287
Cow position: chr21:31246306-31246562 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 179
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 23, 98

Conread position: 37-191
Cow position: chr21:5342051-5341896 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 146, 0

Conread position: 37-309
Cow position: chr21:13225758-13226032 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 182
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 152, 109

Conread position: 38-310
Cow position: chr21:16569945-16570202 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 195
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 221, 100

Conread position: 40-192
Cow position: chr21:19360130-19359980 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 121
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 119, 0

Conread position: 40-246
Cow position: chr21:28237660-28237448 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 148
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 133, 35

Conread position: 41-268
Cow position: chr21:700745-700513 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 158
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 115, 106

Conread position: 42-254
Cow position: chr21:30243633-30243421 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 160
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 180, 113

Conread position: 43-266
Cow position: chr21:30938623-30938392 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 161
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 45, 109

Conread position: 44-266
Cow position: chr21:10130194-10130420 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 156
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 118, 103

Conread position: 44-266
Cow position: chr21:23822205-23822424 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 151
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 129, 93

Conread position: 44-273
Cow position: chr21:37928699-37928931 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 164
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 136, 109

Conread position: 45-191
Cow position: chr21:5149247-5149397 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 28, 0

Conread position: 45-269
Cow position: chr21:25014975-25014766 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 162
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 31, 0

Conread position: 46-257
Cow position: chr21:40820801-40820588 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 158
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 127, 106

Conread position: 46-258
Cow position: chr21:28907492-28907286 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 158
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 78, 47

Conread position: 47-262
Cow position: chr21:44565664-44565462 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 154
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 46, 0

Conread position: 47-263
Cow position: chr21:11182606-11182818 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 169
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 205, 105

Conread position: 47-264
Cow position: chr21:25012135-25012348 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 162
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 202, 95

Conread position: 47-264
Cow position: chr21:34010341-34010123 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 155
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 25, 9

Conread position: 48-262
Cow position: chr21:15012493-15012698 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 163
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 121, 0

Conread position: 49-264
Cow position: chr21:5464805-5465015 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 147
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 21, 0

Conread position: 49-269
Cow position: chr21:27521284-27521066 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 158
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 206, 59

Conread position: 51-300
Cow position: chr21:39403468-39403223 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 165
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 227, 123

Conread position: 52-264
Cow position: chr21:8506488-8506278 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 166
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 115, 0

Conread position: 52-264
Cow position: chr21:8509376-8509166 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 167
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 0

Conread position: 54-289
Cow position: chr21:30657930-30658156 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 169
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 198, 114

Conread position: 56-261
Cow position: chr21:20174380-20174578 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 154
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 145, 111

Conread position: 58-252
Cow position: chr21:32271991-32272187 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 152
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 115, 22

Conread position: 62-261
Cow position: chr21:19083518-19083317 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 143
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 73, 21

Conread position: 62-266
Cow position: chr21:30848873-30848677 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 143
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 84, 0

Conread position: 63-266
Cow position: chr21:13883550-13883750 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 159
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 66, 101

Conread position: 64-247
Cow position: chr21:17193681-17193496 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 127
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 64-262
Cow position: chr21:12348835-12349035 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 136
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 65, 75

Conread position: 64-265
Cow position: chr21:17842927-17842723 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 143
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 91, 73

Conread position: 65-264
Cow position: chr21:745246-745443 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 147
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 184, 74

Conread position: 65-264
Cow position: chr21:5214419-5214621 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 141
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 108, 0

Conread position: 65-264
Cow position: chr21:8986093-8986295 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 143
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 110, 24

Conread position: 65-264
Cow position: chr21:27810461-27810662 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 153
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 107, 32

Conread position: 66-246
Cow position: chr21:18783397-18783215 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 127
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 83, 70

Conread position: 67-271
Cow position: chr21:28882251-28882461 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 148
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 8, 88

Conread position: 70-292
Cow position: chr21:8494716-8494937 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 159
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 65, 74

Conread position: 71-250
Cow position: chr21:39845671-39845857 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 135
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 60, 22

Conread position: 74-257
Cow position: chr21:27744105-27744291 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 136
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 99, 91

Conread position: 74-266
Cow position: chr21:22211333-22211529 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 138
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 81, 73

Conread position: 77-268
Cow position: chr21:48482447-48482257 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 134
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 26, 21

Conread position: 80-261
Cow position: chr21:18449839-18450023 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 133
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 55, 24

Conread position: 83-261
Cow position: chr21:1464432-1464611 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 135
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 67, 62

Conread position: 84-264
Cow position: chr21:6291836-6292018 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 128
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 89, 0

Conread position: 87-264
Cow position: chr21:29418661-29418838 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 126
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 106, 164

Conread position: 87-264
Cow position: chr21:44732950-44732774 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 140
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 11, 0

Conread position: 87-266
Cow position: chr21:37495853-37495673 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 138
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 27, 112

Conread position: 87-275
Cow position: chr21:21158904-21159083 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 139
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 184, 82

Conread position: 88-247
Cow position: chr21:11353154-11353316 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 47, 52

Conread position: 88-253
Cow position: chr21:7460701-7460863 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 120
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 81, 0

Conread position: 88-259
Cow position: chr21:40930381-40930212 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 133
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 81, 0

Conread position: 88-269
Cow position: chr21:29011876-29011702 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 134
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 19, 0

Conread position: 90-250
Cow position: chr21:8351197-8351039 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 126
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 78, 0

Conread position: 90-258
Cow position: chr21:31462658-31462820 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 126
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 77, 0

Conread position: 93-258
Cow position: chr21:18056030-18055866 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 127
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 51, 60

Conread position: 94-284
Cow position: chr21:18495321-18495508 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 138
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 155, 46

Conread position: 98-254
Cow position: chr21:36398459-36398307 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 146, 69

Conread position: 98-265
Cow position: chr21:12530147-12529977 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 123
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 64, 49

Conread position: 98-266
Cow position: chr21:6041888-6042060 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 125
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 75, 0

Conread position: 98-267
Cow position: chr21:16120057-16119891 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 129
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 126, 0

Conread position: 98-270
Cow position: chr21:45376052-45376222 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 125
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 61, 0

Conread position: 102-239
Cow position: chr21:7424906-7424769 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 103
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 107-264
Cow position: chr21:17856878-17857035 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 115
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 145, 39

Conread position: 108-262
Cow position: chr21:30368190-30368341 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 54, 0

Conread position: 115-259
Cow position: chr21:42341817-42341676 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 134, 60

Conread position: 118-270
Cow position: chr21:37479469-37479316 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 120
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 76, 48

Conread position: 120-270
Cow position: chr21:13488678-13488830 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 117
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 54, 0

Conread position: 135-273
Cow position: chr21:35337782-35337645 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 120, 34

Conread position: 146-257
Cow position: chr21:41668781-41668890 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 146-285
Cow position: chr21:20165932-20166075 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 107
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 109, 0

Show alignments to all cow chromosomes.