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Cow genome map

           
Conread name:
           
rpty601b_h3.y1
        

               
Conread position:
               
1-166
               

               
Cow position:
               
chr25:17975437-17975272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
26, 41
               

               
Conread position:
               
1-173
               

               
Cow position:
               
chr25:25051444-25051264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
1-190
               

               
Cow position:
               
chr25:15254403-15254218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
1-191
               

               
Cow position:
               
chr25:22261362-22261184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
1-191
               

               
Cow position:
               
chr25:22531217-22531412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
33, 82
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr25:7799489-7799721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
27, 34
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr25:23245066-23244821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 171
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr25:36872298-36872546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
23, 35
               

               
Conread position:
               
1-248
               

               
Cow position:
               
chr25:36835491-36835245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
27, 146
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr25:36746512-36746256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
39, 132
               

               
Conread position:
               
1-255
               

               
Cow position:
               
chr25:6683128-6682856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
1-257
               

               
Cow position:
               
chr25:12510075-12509825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
18, 172
               

               
Conread position:
               
1-257
               

               
Cow position:
               
chr25:35347844-35348102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
24, 98
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr25:4521900-4521643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
20, 100
               

               
Conread position:
               
1-259
               

               
Cow position:
               
chr25:20785649-20785388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
23, 128
               

               
Conread position:
               
1-259
               

               
Cow position:
               
chr25:22756546-22756810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
28, 143
               

               
Conread position:
               
1-261
               

               
Cow position:
               
chr25:9990162-9989902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
172, 26
               

               
Conread position:
               
1-262
               

               
Cow position:
               
chr25:9843110-9843382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
32, 241
               

               
Conread position:
               
1-262
               

               
Cow position:
               
chr25:21191423-21191679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
29, 173
               

               
Conread position:
               
1-262
               

               
Cow position:
               
chr25:26679164-26679428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
1-262
               

               
Cow position:
               
chr25:41151025-41150763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
35, 47
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr25:11276488-11276750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
26, 41
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr25:18721186-18720924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
33, 173
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr25:24669500-24669249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
29, 63
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr25:33550444-33550716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 195
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr25:14720682-14720943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
36, 161
               

               
Conread position:
               
1-273
               

               
Cow position:
               
chr25:13621423-13621150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
31, 100
               

               
Conread position:
               
2-157
               

               
Cow position:
               
chr25:36036844-36036682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
2-170
               

               
Cow position:
               
chr25:7012365-7012535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
25, 168
               

               
Conread position:
               
2-171
               

               
Cow position:
               
chr25:38982040-38982204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
2-228
               

               
Cow position:
               
chr25:11661879-11661660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
28, 162
               

               
Conread position:
               
2-253
               

               
Cow position:
               
chr25:5846871-5846613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
26, 142
               

               
Conread position:
               
2-254
               

               
Cow position:
               
chr25:20008072-20008327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
27, 12
               

               
Conread position:
               
2-257
               

               
Cow position:
               
chr25:12806981-12807239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
27, 58
               

               
Conread position:
               
2-259
               

               
Cow position:
               
chr25:35052684-35052419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
27, 12
               

               
Conread position:
               
2-261
               

               
Cow position:
               
chr25:12609278-12609545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
28, 102
               

               
Conread position:
               
2-261
               

               
Cow position:
               
chr25:33686744-33686482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
35, 16
               

               
Conread position:
               
2-263
               

               
Cow position:
               
chr25:16921858-16921591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
41, 11
               

               
Conread position:
               
2-264
               

               
Cow position:
               
chr25:26225088-26224833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
28, 151
               

               
Conread position:
               
2-264
               

               
Cow position:
               
chr25:33555545-33555812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
20, 113
               

               
Conread position:
               
2-264
               

               
Cow position:
               
chr25:35612374-35612095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
3-242
               

               
Cow position:
               
chr25:2624745-2624975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
3-243
               

               
Cow position:
               
chr25:23779385-23779151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
70, 24
               

               
Conread position:
               
3-246
               

               
Cow position:
               
chr25:19364122-19363875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 170
               

               
Conread position:
               
3-262
               

               
Cow position:
               
chr25:21668184-21668449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
38, 172
               

               
Conread position:
               
3-263
               

               
Cow position:
               
chr25:20523297-20523036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
19, 162
               

               
Conread position:
               
4-157
               

               
Cow position:
               
chr25:14809219-14809370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
4-256
               

               
Cow position:
               
chr25:15273612-15273859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
28, 168
               

               
Conread position:
               
6-259
               

               
Cow position:
               
chr25:22178861-22179109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
18, 31
               

               
Conread position:
               
6-267
               

               
Cow position:
               
chr25:18288821-18288564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
21, 27
               

               
Conread position:
               
8-229
               

               
Cow position:
               
chr25:33256298-33256533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
14, 71
               

               
Conread position:
               
8-262
               

               
Cow position:
               
chr25:24573010-24573259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
30, 91
               

               
Conread position:
               
12-264
               

               
Cow position:
               
chr25:11432993-11432748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 147
               

               
Conread position:
               
13-191
               

               
Cow position:
               
chr25:40931229-40931402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
20, 67
               

               
Conread position:
               
14-246
               

               
Cow position:
               
chr25:20023431-20023209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
14-264
               

               
Cow position:
               
chr25:26523910-26524165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
26, 72
               

               
Conread position:
               
17-189
               

               
Cow position:
               
chr25:23745217-23745387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
77, 17
               

               
Conread position:
               
17-228
               

               
Cow position:
               
chr25:9107566-9107363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
17-256
               

               
Cow position:
               
chr25:6928550-6928321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
210, 42
               

               
Conread position:
               
17-264
               

               
Cow position:
               
chr25:26700989-26701224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
234, 15
               

               
Conread position:
               
19-150
               

               
Cow position:
               
chr25:14211589-14211719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
7, 16
               

               
Conread position:
               
19-239
               

               
Cow position:
               
chr25:17342417-17342639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
137, 128
               

               
Conread position:
               
19-262
               

               
Cow position:
               
chr25:9025086-9025324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
66, 15
               

               
Conread position:
               
19-266
               

               
Cow position:
               
chr25:13826396-13826633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
20-184
               

               
Cow position:
               
chr25:35826324-35826159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
91, 14
               

               
Conread position:
               
20-222
               

               
Cow position:
               
chr25:6134130-6133928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
159, 86
               

               
Conread position:
               
20-246
               

               
Cow position:
               
chr25:13443450-13443222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
85, 32
               

               
Conread position:
               
20-247
               

               
Cow position:
               
chr25:14791717-14791940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
8, 15
               

               
Conread position:
               
20-247
               

               
Cow position:
               
chr25:26306245-26306017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 124
               

               
Conread position:
               
20-253
               

               
Cow position:
               
chr25:11585480-11585721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
153, 14
               

               
Conread position:
               
20-262
               

               
Cow position:
               
chr25:3346234-3345999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
20-262
               

               
Cow position:
               
chr25:21893299-21893535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
20-263
               

               
Cow position:
               
chr25:24207457-24207207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
50, 14
               

               
Conread position:
               
20-264
               

               
Cow position:
               
chr25:6464069-6463823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
147, 88
               

               
Conread position:
               
20-264
               

               
Cow position:
               
chr25:35109309-35109073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
234, 147
               

               
Conread position:
               
20-264
               

               
Cow position:
               
chr25:36074035-36073796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
153, 14
               

               
Conread position:
               
20-266
               

               
Cow position:
               
chr25:5920904-5921153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
135, 127
               

               
Conread position:
               
20-266
               

               
Cow position:
               
chr25:20348829-20349081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
139, 127
               

               
Conread position:
               
20-266
               

               
Cow position:
               
chr25:33663945-33663702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
145, 126
               

               
Conread position:
               
20-268
               

               
Cow position:
               
chr25:24862832-24863077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
18, 169
               

               
Conread position:
               
20-270
               

               
Cow position:
               
chr25:11051490-11051732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
5, 68
               

               
Conread position:
               
20-274
               

               
Cow position:
               
chr25:7216792-7217030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
250, 38
               

               
Conread position:
               
20-274
               

               
Cow position:
               
chr25:9269310-9269553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
20-294
               

               
Cow position:
               
chr25:6292530-6292799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
137, 11
               

               
Conread position:
               
21-187
               

               
Cow position:
               
chr25:4547757-4547595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
21-250
               

               
Cow position:
               
chr25:16319179-16318961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
21-260
               

               
Cow position:
               
chr25:19129816-19130053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
21-261
               

               
Cow position:
               
chr25:10407455-10407209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
59, 12
               

               
Conread position:
               
21-261
               

               
Cow position:
               
chr25:18760746-18760509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
230, 13
               

               
Conread position:
               
21-262
               

               
Cow position:
               
chr25:13272531-13272770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
21-262
               

               
Cow position:
               
chr25:22348502-22348257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
151, 0
               

               
Conread position:
               
21-264
               

               
Cow position:
               
chr25:36716878-36717115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
9, 58
               

               
Conread position:
               
22-180
               

               
Cow position:
               
chr25:21209005-21208855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
22-181
               

               
Cow position:
               
chr25:4947924-4948081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
22-192
               

               
Cow position:
               
chr25:23505014-23505184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
152, 141
               

               
Conread position:
               
22-220
               

               
Cow position:
               
chr25:2041906-2041723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
22-250
               

               
Cow position:
               
chr25:1840285-1840510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
7, 147
               

               
Conread position:
               
22-250
               

               
Cow position:
               
chr25:23829166-23828941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
22-257
               

               
Cow position:
               
chr25:19584326-19584565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
102, 88
               

               
Conread position:
               
22-261
               

               
Cow position:
               
chr25:27595528-27595760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
22-262
               

               
Cow position:
               
chr25:7551397-7551167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
230, 70
               

               
Conread position:
               
22-262
               

               
Cow position:
               
chr25:14833702-14833466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
86, 144
               

               
Conread position:
               
22-262
               

               
Cow position:
               
chr25:18929230-18929005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
144, 0
               

               
Conread position:
               
22-264
               

               
Cow position:
               
chr25:28597650-28597401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
63, 196
               

               
Conread position:
               
22-264
               

               
Cow position:
               
chr25:40682700-40682941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
230, 59
               

               
Conread position:
               
22-270
               

               
Cow position:
               
chr25:3992747-3992988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
44, 73
               

               
Conread position:
               
22-273
               

               
Cow position:
               
chr25:4488881-4489116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
230, 17
               

               
Conread position:
               
22-274
               

               
Cow position:
               
chr25:33457694-33457945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
226, 145
               

               
Conread position:
               
23-128
               

               
Cow position:
               
chr25:24051929-24052034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
106
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
23-257
               

               
Cow position:
               
chr25:21192966-21192744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
226, 37
               

               
Conread position:
               
23-266
               

               
Cow position:
               
chr25:18810307-18810537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
229, 14
               

               
Conread position:
               
23-266
               

               
Cow position:
               
chr25:19478639-19478896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
134, 11
               

               
Conread position:
               
23-268
               

               
Cow position:
               
chr25:8120746-8120990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
145, 86
               

               
Conread position:
               
24-172
               

               
Cow position:
               
chr25:14157592-14157737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
24-173
               

               
Cow position:
               
chr25:6961189-6961040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
24-228
               

               
Cow position:
               
chr25:15714837-15715039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
24-247
               

               
Cow position:
               
chr25:17119709-17119930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
38, 10
               

               
Conread position:
               
24-250
               

               
Cow position:
               
chr25:7380876-7380649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
13, 205
               

               
Conread position:
               
24-250
               

               
Cow position:
               
chr25:10504372-10504146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
149, 13
               

               
Conread position:
               
24-259
               

               
Cow position:
               
chr25:19679319-19679551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
228, 135
               

               
Conread position:
               
24-262
               

               
Cow position:
               
chr25:7750416-7750648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
24-268
               

               
Cow position:
               
chr25:38957926-38958151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
24-310
               

               
Cow position:
               
chr25:8346037-8345746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
61, 35
               

               
Conread position:
               
25-264
               

               
Cow position:
               
chr25:1824132-1823886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
25-265
               

               
Cow position:
               
chr25:22298602-22298836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
25-277
               

               
Cow position:
               
chr25:14152152-14152404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
125, 7
               

               
Conread position:
               
25-277
               

               
Cow position:
               
chr25:36081842-36082082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
250, 46
               

               
Conread position:
               
26-246
               

               
Cow position:
               
chr25:20402743-20402524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
135, 121
               

               
Conread position:
               
26-266
               

               
Cow position:
               
chr25:37635868-37635632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
228, 17
               

               
Conread position:
               
27-259
               

               
Cow position:
               
chr25:7641482-7641257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
80, 12
               

               
Conread position:
               
27-264
               

               
Cow position:
               
chr25:26136856-26136616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
108, 117
               

               
Conread position:
               
28-199
               

               
Cow position:
               
chr25:15463556-15463724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
28-257
               

               
Cow position:
               
chr25:37637701-37637466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
10, 216
               

               
Conread position:
               
28-266
               

               
Cow position:
               
chr25:41130197-41130438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
139, 91
               

               
Conread position:
               
29-171
               

               
Cow position:
               
chr25:7379178-7379036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
33-187
               

               
Cow position:
               
chr25:5920054-5920206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
33-247
               

               
Cow position:
               
chr25:21317455-21317232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
43, 119
               

               
Conread position:
               
33-261
               

               
Cow position:
               
chr25:28423116-28423350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
50, 42
               

               
Conread position:
               
33-281
               

               
Cow position:
               
chr25:23053530-23053783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
140, 112
               

               
Conread position:
               
33-283
               

               
Cow position:
               
chr25:9769389-9769641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
102, 111
               

               
Conread position:
               
34-197
               

               
Cow position:
               
chr25:12117025-12116862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
34-220
               

               
Cow position:
               
chr25:16867212-16867404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
34-246
               

               
Cow position:
               
chr25:35339216-35339005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
79, 136
               

               
Conread position:
               
34-250
               

               
Cow position:
               
chr25:16372525-16372742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
42, 118
               

               
Conread position:
               
34-253
               

               
Cow position:
               
chr25:9615811-9616030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
34-254
               

               
Cow position:
               
chr25:25716624-25716837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
146, 52
               

               
Conread position:
               
34-257
               

               
Cow position:
               
chr25:37332062-37331849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
34-259
               

               
Cow position:
               
chr25:13823745-13823520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
221, 108
               

               
Conread position:
               
34-264
               

               
Cow position:
               
chr25:11956778-11957007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
143, 155
               

               
Conread position:
               
34-268
               

               
Cow position:
               
chr25:5637411-5637182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
34-270
               

               
Cow position:
               
chr25:22315179-22315417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
218, 153
               

               
Conread position:
               
34-272
               

               
Cow position:
               
chr25:26089838-26089614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
220, 22
               

               
Conread position:
               
34-278
               

               
Cow position:
               
chr25:28668076-28667827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
34-305
               

               
Cow position:
               
chr25:17918948-17919217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
100, 105
               

               
Conread position:
               
35-250
               

               
Cow position:
               
chr25:13222875-13223086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
35-250
               

               
Cow position:
               
chr25:26072582-26072374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
35-253
               

               
Cow position:
               
chr25:4157262-4157055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
35-267
               

               
Cow position:
               
chr25:33557251-33557471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
35-289
               

               
Cow position:
               
chr25:7007887-7008147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
122, 254
               

               
Conread position:
               
36-242
               

               
Cow position:
               
chr25:17190767-17190573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
36-246
               

               
Cow position:
               
chr25:36873357-36873152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
36-261
               

               
Cow position:
               
chr25:40904854-40904627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
144, 99
               

               
Conread position:
               
36-264
               

               
Cow position:
               
chr25:7673271-7673511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
39-262
               

               
Cow position:
               
chr25:2111028-2111237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
41-265
               

               
Cow position:
               
chr25:23520047-23519831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
94, 51
               

               
Conread position:
               
43-257
               

               
Cow position:
               
chr25:14225345-14225563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
107, 93
               

               
Conread position:
               
43-261
               

               
Cow position:
               
chr25:20085554-20085780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
16, 97
               

               
Conread position:
               
43-262
               

               
Cow position:
               
chr25:3744762-3744533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
43-264
               

               
Cow position:
               
chr25:12305259-12305484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
137, 102
               

               
Conread position:
               
43-268
               

               
Cow position:
               
chr25:30625100-30624862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
130, 192
               

               
Conread position:
               
44-247
               

               
Cow position:
               
chr25:31514165-31514370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
45-249
               

               
Cow position:
               
chr25:6258868-6259072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
72, 132
               

               
Conread position:
               
45-253
               

               
Cow position:
               
chr25:36555704-36555507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
141, 0
               

               
Conread position:
               
45-262
               

               
Cow position:
               
chr25:14106817-14107038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
112, 48
               

               
Conread position:
               
45-264
               

               
Cow position:
               
chr25:433063-432844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
128, 181
               

               
Conread position:
               
47-253
               

               
Cow position:
               
chr25:9574143-9573943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
47-279
               

               
Cow position:
               
chr25:36873069-36872836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
205, 225
               

               
Conread position:
               
48-263
               

               
Cow position:
               
chr25:2361825-2362027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
48-265
               

               
Cow position:
               
chr25:11857998-11857782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
78, 16
               

               
Conread position:
               
48-270
               

               
Cow position:
               
chr25:20202901-20203118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
203, 119
               

               
Conread position:
               
49-264
               

               
Cow position:
               
chr25:5807933-5808153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
13, 92
               

               
Conread position:
               
53-257
               

               
Cow position:
               
chr25:23998931-23998743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
55-267
               

               
Cow position:
               
chr25:1802602-1802819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
21, 118
               

               
Conread position:
               
56-183
               

               
Cow position:
               
chr25:34967513-34967388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
56-257
               

               
Cow position:
               
chr25:7306287-7306486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
22, 104
               

               
Conread position:
               
56-264
               

               
Cow position:
               
chr25:30852763-30852968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
56-267
               

               
Cow position:
               
chr25:31657281-31657072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
198, 119
               

               
Conread position:
               
56-273
               

               
Cow position:
               
chr25:11760454-11760249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
57-242
               

               
Cow position:
               
chr25:8347649-8347834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
59-262
               

               
Cow position:
               
chr25:32453417-32453231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
62-262
               

               
Cow position:
               
chr25:18551332-18551131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
115, 75
               

               
Conread position:
               
63-253
               

               
Cow position:
               
chr25:2662402-2662586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
63-262
               

               
Cow position:
               
chr25:15573391-15573594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
159, 0
               

               
Conread position:
               
63-263
               

               
Cow position:
               
chr25:18491039-18491240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
23, 91
               

               
Conread position:
               
63-265
               

               
Cow position:
               
chr25:28945023-28945225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
185, 89
               

               
Conread position:
               
63-268
               

               
Cow position:
               
chr25:11060135-11060342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
126, 100
               

               
Conread position:
               
63-268
               

               
Cow position:
               
chr25:36369822-36370030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
124, 63
               

               
Conread position:
               
63-268
               

               
Cow position:
               
chr25:36375513-36375721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
124, 63
               

               
Conread position:
               
65-244
               

               
Cow position:
               
chr25:23323495-23323680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
66-262
               

               
Cow position:
               
chr25:24115310-24115114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
67-257
               

               
Cow position:
               
chr25:35902754-35902942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
68-270
               

               
Cow position:
               
chr25:15349897-15349700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
71-247
               

               
Cow position:
               
chr25:7684887-7684713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
71-255
               

               
Cow position:
               
chr25:22734019-22734200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
71-256
               

               
Cow position:
               
chr25:14209996-14210171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
72-264
               

               
Cow position:
               
chr25:31926365-31926181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
73-266
               

               
Cow position:
               
chr25:7590685-7590486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
82, 74
               

               
Conread position:
               
77-247
               

               
Cow position:
               
chr25:1763104-1763270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
58, 63
               

               
Conread position:
               
77-252
               

               
Cow position:
               
chr25:5791700-5791522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
77-258
               

               
Cow position:
               
chr25:22565941-22565768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
172, 51
               

               
Conread position:
               
80-266
               

               
Cow position:
               
chr25:3141523-3141708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
171, 66
               

               
Conread position:
               
80-282
               

               
Cow position:
               
chr25:33100595-33100792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
171, 66
               

               
Conread position:
               
83-253
               

               
Cow position:
               
chr25:18934612-18934444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
85-277
               

               
Cow position:
               
chr25:15305703-15305899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
92, 61
               

               
Conread position:
               
88-216
               

               
Cow position:
               
chr25:6781890-6782015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
88-239
               

               
Cow position:
               
chr25:14849625-14849472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
88-253
               

               
Cow position:
               
chr25:10856686-10856524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
98-247
               

               
Cow position:
               
chr25:1509928-1509777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
98-284
               

               
Cow position:
               
chr25:15999514-15999324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
79, 61
               

               
Conread position:
               
101-244
               

               
Cow position:
               
chr25:22570999-22571142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
101-262
               

               
Cow position:
               
chr25:21082366-21082203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
88, 66
               

               
Conread position:
               
105-268
               

               
Cow position:
               
chr25:30709303-30709138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
106-253
               

               
Cow position:
               
chr25:17141148-17141295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
107-262
               

               
Cow position:
               
chr25:2414844-2414998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
115-263
               

               
Cow position:
               
chr25:7441064-7441211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
116-257
               

               
Cow position:
               
chr25:13470658-13470515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
57, 0
               
Show alignments to all cow chromosomes.