Cow genome map

Conread name: rpty601b_h3.y1

Conread position: 1-157
Cow position: chr5:26150457-26150296 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 24, 98

Conread position: 1-157
Cow position: chr5:61102678-61102841 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 127
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 38, 76

Conread position: 1-165
Cow position: chr5:45804023-45804193 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 24, 139

Conread position: 1-176
Cow position: chr5:20422224-20422049 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 127
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 25, 95

Conread position: 1-183
Cow position: chr5:63150204-63150019 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 132
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 31, 87

Conread position: 1-184
Cow position: chr5:49440910-49440724 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 138
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 25, 158

Conread position: 1-184
Cow position: chr5:54375543-54375352 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 137
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 30, 176

Conread position: 1-185
Cow position: chr5:44726362-44726182 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 131
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 29, 0

Conread position: 1-186
Cow position: chr5:60599230-60599051 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 132
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 166, 31

Conread position: 1-186
Cow position: chr5:62378755-62378934 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 133
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 1-191
Cow position: chr5:4166608-4166801 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 146
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 23, 99

Conread position: 1-191
Cow position: chr5:23168865-23168667 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 149
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 33, 0

Conread position: 1-191
Cow position: chr5:50821746-50821946 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 147
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 31, 0

Conread position: 1-191
Cow position: chr5:56339056-56338862 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 139
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 32, 0

Conread position: 1-192
Cow position: chr5:5111111-5110911 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 148
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 29, 169

Conread position: 1-192
Cow position: chr5:24069362-24069547 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 139
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 52, 13

Conread position: 1-212
Cow position: chr5:7755598-7755383 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 154
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 156, 27

Conread position: 1-235
Cow position: chr5:64027044-64026812 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 178
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 167, 30

Conread position: 1-242
Cow position: chr5:15722102-15721878 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 169
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 31, 0

Conread position: 1-246
Cow position: chr5:45397536-45397779 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 188
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 36, 102

Conread position: 1-246
Cow position: chr5:66551935-66551678 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 189
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 28, 196

Conread position: 1-246
Cow position: chr5:68718833-68719081 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 181
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 35, 103

Conread position: 1-247
Cow position: chr5:62172378-62172613 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 189
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 30, 46

Conread position: 1-250
Cow position: chr5:50600018-50600264 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 13

Conread position: 1-250
Cow position: chr5:65136237-65136475 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 173
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 27, 0

Conread position: 1-252
Cow position: chr5:12673504-12673260 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 181
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 70, 0

Conread position: 1-253
Cow position: chr5:50943183-50942939 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 186
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 151, 33

Conread position: 1-253
Cow position: chr5:66257602-66257855 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 187
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 24, 102

Conread position: 1-253
Cow position: chr5:72895649-72895907 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 176
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 25, 0

Conread position: 1-256
Cow position: chr5:30253705-30253964 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 200

Conread position: 1-256
Cow position: chr5:30276661-30276911 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 21

Conread position: 1-256
Cow position: chr5:53835677-53835945 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 191
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 37, 123

Conread position: 1-257
Cow position: chr5:29903554-29903318 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 189
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 158, 0

Conread position: 1-257
Cow position: chr5:30629195-30628928 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 201
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 23, 159

Conread position: 1-257
Cow position: chr5:55232841-55232598 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 181
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 153, 37

Conread position: 1-257
Cow position: chr5:63192778-63192529 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 192
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 33, 104

Conread position: 1-259
Cow position: chr5:11229705-11229444 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 187
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 33, 78

Conread position: 1-259
Cow position: chr5:31475648-31475912 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 183
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 27, 146

Conread position: 1-259
Cow position: chr5:35763239-35763471 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 186
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 40, 80

Conread position: 1-259
Cow position: chr5:56028564-56028317 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 192
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 251, 33

Conread position: 1-259
Cow position: chr5:56548544-56548794 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 185
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 135, 27

Conread position: 1-261
Cow position: chr5:7044743-7044477 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 187
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 30, 165

Conread position: 1-261
Cow position: chr5:19278736-19278474 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 182
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 77, 33

Conread position: 1-262
Cow position: chr5:20288300-20288028 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 1-262
Cow position: chr5:24996259-24995989 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 199
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 29, 117

Conread position: 1-263
Cow position: chr5:21828830-21829095 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 130

Conread position: 1-264
Cow position: chr5:25035279-25035022 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 198
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 191, 31

Conread position: 1-264
Cow position: chr5:32339002-32338728 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 191
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 20, 67

Conread position: 1-264
Cow position: chr5:59627010-59626740 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 153

Conread position: 1-264
Cow position: chr5:60016131-60016396 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 196
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 37, 102

Conread position: 1-266
Cow position: chr5:52001657-52001388 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 182
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 28, 148

Conread position: 1-266
Cow position: chr5:57393337-57393067 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 180
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 33, 145

Conread position: 1-267
Cow position: chr5:65941288-65941013 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 165

Conread position: 1-268
Cow position: chr5:44446904-44446639 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 201
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 30, 174

Conread position: 1-268
Cow position: chr5:57265941-57265661 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 185
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 30, 152

Conread position: 1-269
Cow position: chr5:69383228-69383486 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 0

Conread position: 1-272
Cow position: chr5:69337787-69338055 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 196
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 24, 168

Conread position: 1-273
Cow position: chr5:3582529-3582797 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 166

Conread position: 1-275
Cow position: chr5:69461294-69461575 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 206
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 27, 136

Conread position: 1-277
Cow position: chr5:47601783-47602054 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 199
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 251, 26

Conread position: 1-278
Cow position: chr5:22667041-22667317 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 31

Conread position: 1-280
Cow position: chr5:17768180-17767906 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 185
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 94, 37

Conread position: 1-285
Cow position: chr5:45405005-45405306 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 198
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 28, 155

Conread position: 1-285
Cow position: chr5:61725930-61726212 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 205
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 34, 85

Conread position: 1-293
Cow position: chr5:44028341-44028047 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 218
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 33, 99

Conread position: 2-157
Cow position: chr5:48009883-48009734 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 2-177
Cow position: chr5:35982776-35982592 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 141
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 28, 0

Conread position: 2-190
Cow position: chr5:58446771-58446964 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 136
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 33, 169

Conread position: 2-234
Cow position: chr5:55796000-55795768 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 169
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 27, 161

Conread position: 2-244
Cow position: chr5:20779431-20779187 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 169
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 34, 79

Conread position: 2-244
Cow position: chr5:26097260-26097502 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 164
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 24, 64

Conread position: 2-244
Cow position: chr5:72006528-72006285 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 180
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 29, 173

Conread position: 2-246
Cow position: chr5:53946861-53947113 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 167
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 27, 149

Conread position: 2-247
Cow position: chr5:66581930-66582185 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 178
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 40, 16

Conread position: 2-257
Cow position: chr5:30247555-30247300 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 175
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 27, 128

Conread position: 2-262
Cow position: chr5:11668219-11667953 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 186
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 27, 161

Conread position: 2-263
Cow position: chr5:7057435-7057166 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 181
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 36, 116

Conread position: 2-263
Cow position: chr5:55068671-55068932 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 177
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 29, 218

Conread position: 2-264
Cow position: chr5:9894161-9893893 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 195
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 22, 173

Conread position: 2-264
Cow position: chr5:20128019-20128286 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 177
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 25, 141

Conread position: 2-264
Cow position: chr5:35826568-35826829 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 193
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 34, 166

Conread position: 2-264
Cow position: chr5:42670898-42670641 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 196
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 79, 32

Conread position: 2-264
Cow position: chr5:43604108-43604373 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 176
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 17, 84

Conread position: 2-264
Cow position: chr5:64321719-64321993 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 190
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 28, 179

Conread position: 2-266
Cow position: chr5:26133122-26132859 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 180
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 158, 27

Conread position: 2-268
Cow position: chr5:25495384-25495112 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 197
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 171, 42

Conread position: 2-268
Cow position: chr5:44848055-44847791 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 179
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 27, 169

Conread position: 2-270
Cow position: chr5:33834009-33834280 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 185
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 27, 136

Conread position: 2-293
Cow position: chr5:5855824-5856118 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 198
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 13, 263

Conread position: 2-316
Cow position: chr5:57768016-57767702 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 205
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 22, 61

Conread position: 3-151
Cow position: chr5:20407714-20407559 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 114
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 3-171
Cow position: chr5:56517068-56517243 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 27, 102

Conread position: 3-183
Cow position: chr5:69636201-69636377 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 135
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 171, 28

Conread position: 3-218
Cow position: chr5:7193383-7193599 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 156
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 31, 150

Conread position: 3-219
Cow position: chr5:17602235-17602018 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 162
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 31, 43

Conread position: 3-245
Cow position: chr5:66466284-66466526 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 186
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 31, 64

Conread position: 3-257
Cow position: chr5:30302859-30303106 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 189
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 24, 77

Conread position: 3-259
Cow position: chr5:73253381-73253632 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 186
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 24, 16

Conread position: 3-261
Cow position: chr5:74643705-74643455 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 188
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 23, 63

Conread position: 3-262
Cow position: chr5:56877451-56877700 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 190
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 25, 91

Conread position: 3-268
Cow position: chr5:56014695-56014958 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 199
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 28, 173

Conread position: 4-257
Cow position: chr5:70678673-70678420 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 169
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 30, 75

Conread position: 4-263
Cow position: chr5:46512796-46512537 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 191
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 153, 111

Conread position: 4-263
Cow position: chr5:61914537-61914804 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 184
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 86, 29

Conread position: 4-272
Cow position: chr5:31052352-31052627 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 209
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 134, 177

Conread position: 4-273
Cow position: chr5:26549175-26548902 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 162

Conread position: 8-184
Cow position: chr5:39258483-39258656 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 125
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 37, 90

Conread position: 10-185
Cow position: chr5:9170602-9170433 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 24, 0

Conread position: 13-250
Cow position: chr5:12434524-12434753 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 175
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 14, 27

Conread position: 16-170
Cow position: chr5:6045278-6045434 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 114
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 69, 0

Conread position: 17-179
Cow position: chr5:74974343-74974182 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 115
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 24, 0

Conread position: 17-259
Cow position: chr5:20843409-20843170 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 169
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 108, 17

Conread position: 17-259
Cow position: chr5:28302763-28302528 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 171
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 14, 155

Conread position: 17-259
Cow position: chr5:39447550-39447298 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 175
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 124, 0

Conread position: 17-259
Cow position: chr5:49474559-49474326 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 173
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 235, 26

Conread position: 17-260
Cow position: chr5:67118405-67118632 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 173
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 150, 0

Conread position: 17-264
Cow position: chr5:34562002-34562241 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 175
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 64, 17

Conread position: 17-264
Cow position: chr5:45187131-45186882 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 178
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 150, 22

Conread position: 20-163
Cow position: chr5:58793619-58793474 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 134, 0

Conread position: 20-191
Cow position: chr5:30949927-30949756 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 123
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 161, 148

Conread position: 20-191
Cow position: chr5:43992313-43992483 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 123
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 157, 14

Conread position: 20-191
Cow position: chr5:61875532-61875694 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 128
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 14, 0

Conread position: 20-192
Cow position: chr5:4710163-4709992 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 123
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 73, 0

Conread position: 20-240
Cow position: chr5:37713666-37713444 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 149
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 135, 127

Conread position: 20-246
Cow position: chr5:49501834-49501604 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 164
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 153, 12

Conread position: 20-247
Cow position: chr5:25366088-25366314 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 165
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 39, 13

Conread position: 20-250
Cow position: chr5:55955898-55956128 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 177
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 72, 12

Conread position: 20-250
Cow position: chr5:63234836-63234604 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 167
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 154, 55

Conread position: 20-255
Cow position: chr5:30845102-30845329 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 167
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 17, 0

Conread position: 20-257
Cow position: chr5:34624948-34625173 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 169
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 74, 17

Conread position: 20-257
Cow position: chr5:59627087-59627317 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 167
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 18, 120

Conread position: 20-260
Cow position: chr5:57074345-57074109 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 181
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 9, 152

Conread position: 20-262
Cow position: chr5:45845704-45845460 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 184
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 19, 134

Conread position: 20-264
Cow position: chr5:34976852-34976608 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 173
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 109, 12

Conread position: 20-265
Cow position: chr5:60210155-60209909 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 169
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 184, 126

Conread position: 20-266
Cow position: chr5:65883638-65883389 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 165
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 140, 127

Conread position: 20-266
Cow position: chr5:65967744-65967501 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 169
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 6, 150

Conread position: 20-268
Cow position: chr5:25597820-25598066 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 171
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 28, 65

Conread position: 20-268
Cow position: chr5:36039016-36038769 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 185
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 11, 76

Conread position: 20-268
Cow position: chr5:41165076-41165315 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 179
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 148, 0

Conread position: 20-268
Cow position: chr5:57935120-57934883 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 182
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 229, 139

Conread position: 20-270
Cow position: chr5:63240965-63241220 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 171
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 6, 15

Conread position: 20-271
Cow position: chr5:61455836-61456083 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 174
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 211, 73

Conread position: 20-273
Cow position: chr5:64140524-64140782 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 170
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 39, 14

Conread position: 20-295
Cow position: chr5:58944-58663 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 185
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 166, 95

Conread position: 21-216
Cow position: chr5:60183792-60183984 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 148
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 59, 150

Conread position: 21-239
Cow position: chr5:65752847-65753067 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 171
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 15, 136

Conread position: 21-240
Cow position: chr5:56334519-56334311 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 159
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 206, 71

Conread position: 21-257
Cow position: chr5:39815501-39815275 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 173
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 146, 35

Conread position: 21-257
Cow position: chr5:59384699-59384461 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 165
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 12, 39

Conread position: 21-261
Cow position: chr5:64176138-64175901 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 174
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 14, 147

Conread position: 21-263
Cow position: chr5:39937106-39937348 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 168
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 135, 13

Conread position: 21-264
Cow position: chr5:30232897-30233142 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 178
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 131, 117

Conread position: 21-264
Cow position: chr5:43858432-43858186 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 170
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 13, 85

Conread position: 21-265
Cow position: chr5:57101790-57101564 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 178
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 104, 75

Conread position: 22-191
Cow position: chr5:46509875-46509707 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 155, 141

Conread position: 22-236
Cow position: chr5:64139550-64139761 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 155
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 149, 177

Conread position: 22-257
Cow position: chr5:12901913-12902144 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 165
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 113, 32

Conread position: 22-257
Cow position: chr5:17087030-17086792 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 181
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 155, 86

Conread position: 22-257
Cow position: chr5:50857923-50858161 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 158
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 73, 126

Conread position: 22-257
Cow position: chr5:62811814-62812052 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 160
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 113, 122

Conread position: 22-258
Cow position: chr5:69099710-69099945 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 0

Conread position: 22-259
Cow position: chr5:14314520-14314743 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 168
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 10, 0

Conread position: 22-259
Cow position: chr5:17104845-17105073 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 182
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 230, 12

Conread position: 22-259
Cow position: chr5:43402895-43403137 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 182
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 134, 130

Conread position: 22-262
Cow position: chr5:38833112-38833344 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 174
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 17, 59

Conread position: 22-263
Cow position: chr5:57686747-57686512 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 176
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 145, 0

Conread position: 22-264
Cow position: chr5:5257296-5257055 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 161
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 159, 9

Conread position: 22-264
Cow position: chr5:26467616-26467859 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 173
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 77, 213

Conread position: 22-264
Cow position: chr5:56070849-56071090 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 0

Conread position: 22-267
Cow position: chr5:46541065-46540822 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 181
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 78, 64

Conread position: 22-268
Cow position: chr5:56613573-56613325 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 165
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 161, 12

Conread position: 22-270
Cow position: chr5:12322815-12322572 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 179
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 7, 76

Conread position: 22-272
Cow position: chr5:21617448-21617695 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 0

Conread position: 22-312
Cow position: chr5:34915062-34914770 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 207
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 202, 12

Conread position: 23-181
Cow position: chr5:9234000-9233841 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 126
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 11, 147

Conread position: 23-199
Cow position: chr5:63987454-63987280 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 123
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 79, 0

Conread position: 23-216
Cow position: chr5:66530910-66531099 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 138
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 102, 0

Conread position: 23-247
Cow position: chr5:64523871-64523649 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 153
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 171, 11

Conread position: 23-250
Cow position: chr5:67932475-67932248 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 159
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 145, 37

Conread position: 23-262
Cow position: chr5:22242781-22242544 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 176
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 58, 80

Conread position: 23-264
Cow position: chr5:26262681-26262453 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 166
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 175, 11

Conread position: 23-264
Cow position: chr5:32394590-32394836 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 167
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 161, 113

Conread position: 23-271
Cow position: chr5:42845601-42845357 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 164
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 107, 9

Conread position: 23-285
Cow position: chr5:4267662-4267911 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 184
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 11, 0

Conread position: 23-292
Cow position: chr5:35989748-35990027 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 192
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 38, 33

Conread position: 24-186
Cow position: chr5:43929742-43929582 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 117
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 10, 0

Conread position: 24-195
Cow position: chr5:60668692-60668869 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 55, 17

Conread position: 24-238
Cow position: chr5:57419801-57419590 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 149
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 126, 10

Conread position: 24-257
Cow position: chr5:52165185-52164948 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 162
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 168, 87

Conread position: 24-268
Cow position: chr5:15363874-15364106 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 170
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 145, 0

Conread position: 25-250
Cow position: chr5:49342056-49341817 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 171
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 148, 0

Conread position: 25-257
Cow position: chr5:33560741-33560512 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 164
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 224, 127

Conread position: 25-267
Cow position: chr5:48867471-48867234 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 162
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 235, 106

Conread position: 26-257
Cow position: chr5:71494817-71495038 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 161
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 158, 7

Conread position: 26-263
Cow position: chr5:50723041-50723280 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 162
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 109, 8

Conread position: 26-268
Cow position: chr5:51053658-51053412 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 172
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 44, 21

Conread position: 27-264
Cow position: chr5:55965899-55965660 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 167
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 107, 112

Conread position: 27-266
Cow position: chr5:43371199-43370957 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 161
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 128, 38

Conread position: 27-270
Cow position: chr5:60515033-60514784 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 182
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 108, 94

Conread position: 27-273
Cow position: chr5:19752302-19752540 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 175
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 56, 0

Conread position: 27-273
Cow position: chr5:56060075-56059821 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 177
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 102, 119

Conread position: 28-239
Cow position: chr5:16939598-16939385 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 145
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 106, 111

Conread position: 28-246
Cow position: chr5:44028758-44028538 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 147
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 85, 120

Conread position: 28-256
Cow position: chr5:30805161-30805382 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 158
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 193, 70

Conread position: 28-261
Cow position: chr5:67679175-67679412 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 158
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 127, 119

Conread position: 28-262
Cow position: chr5:30561929-30562159 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 159
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 223, 6

Conread position: 28-264
Cow position: chr5:22795212-22795438 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 178
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 9, 70

Conread position: 28-264
Cow position: chr5:57062533-57062294 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 166
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 125, 141

Conread position: 28-266
Cow position: chr5:17835162-17834922 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 163
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 126, 97

Conread position: 28-266
Cow position: chr5:19335786-19335540 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 162
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 29-257
Cow position: chr5:70270864-70271092 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 160
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 160, 137

Conread position: 32-219
Cow position: chr5:17605134-17604949 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 138
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 117, 137

Conread position: 32-257
Cow position: chr5:36142987-36143203 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 162
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 7, 12

Conread position: 32-264
Cow position: chr5:40152479-40152719 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 165
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 44, 118

Conread position: 33-259
Cow position: chr5:37983163-37983398 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 164
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 27, 117

Conread position: 33-261
Cow position: chr5:12873752-12873981 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 161
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 100, 106

Conread position: 33-270
Cow position: chr5:60175480-60175723 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 177
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 32, 25

Conread position: 34-218
Cow position: chr5:63627524-63627349 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 136
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 161, 59

Conread position: 34-237
Cow position: chr5:74580792-74580992 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 149
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 13, 0

Conread position: 34-242
Cow position: chr5:21223326-21223519 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 153
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 176, 22

Conread position: 34-253
Cow position: chr5:5017376-5017592 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 157
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 47, 18

Conread position: 34-253
Cow position: chr5:29828048-29828269 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 156
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 39, 104

Conread position: 34-253
Cow position: chr5:56524176-56524383 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 154
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 125, 0

Conread position: 34-253
Cow position: chr5:56860449-56860664 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 149
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 161, 73

Conread position: 34-257
Cow position: chr5:67634515-67634283 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 159
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 115, 0

Conread position: 34-258
Cow position: chr5:68537663-68537438 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 151
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 160, 52

Conread position: 34-259
Cow position: chr5:44810237-44810010 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 152
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 101, 106

Conread position: 34-262
Cow position: chr5:2309554-2309328 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 157
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 136, 0

Conread position: 34-262
Cow position: chr5:6520013-6520236 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 161
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 62, 108

Conread position: 34-263
Cow position: chr5:3771852-3772073 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 157
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 26, 0

Conread position: 34-266
Cow position: chr5:60422968-60422734 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 158
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 121, 113

Conread position: 34-268
Cow position: chr5:4280448-4280681 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 166
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 33, 120

Conread position: 34-268
Cow position: chr5:16938020-16937795 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 164
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 55, 49

Conread position: 34-268
Cow position: chr5:61049334-61049571 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 163
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 123, 112

Conread position: 34-268
Cow position: chr5:65679968-65679737 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 163
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 186, 63

Conread position: 34-270
Cow position: chr5:42050555-42050780 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 179
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 24, 0

Conread position: 34-273
Cow position: chr5:72045672-72045438 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 169
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 155, 63

Conread position: 34-277
Cow position: chr5:43923150-43922929 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 170
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 52, 0

Conread position: 34-283
Cow position: chr5:40109495-40109738 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 73

Conread position: 34-286
Cow position: chr5:35969535-35969798 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 183
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 139, 41

Conread position: 34-328
Cow position: chr5:50101374-50101079 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 200
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 66, 114

Conread position: 35-247
Cow position: chr5:17555029-17554820 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 157
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 60, 107

Conread position: 35-253
Cow position: chr5:60523736-60523948 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 165
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 21, 64

Conread position: 35-268
Cow position: chr5:33273698-33273936 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 173
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 45, 66

Conread position: 36-233
Cow position: chr5:57230334-57230140 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 138
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 175, 133

Conread position: 36-250
Cow position: chr5:66366514-66366725 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 159
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 138, 66

Conread position: 36-261
Cow position: chr5:14920925-14920697 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 163
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 139, 16

Conread position: 36-268
Cow position: chr5:50824596-50824818 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 176
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 123, 0

Conread position: 36-268
Cow position: chr5:61784723-61784489 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 158
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 98, 103

Conread position: 36-290
Cow position: chr5:35684942-35685187 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 183
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 150, 61

Conread position: 37-257
Cow position: chr5:31217051-31216828 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 152
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 32, 111

Conread position: 37-262
Cow position: chr5:29681103-29681325 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 150
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 214, 114

Conread position: 38-157
Cow position: chr5:12169762-12169644 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 29, 0

Conread position: 38-246
Cow position: chr5:7177157-7177366 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 142
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 146, 0

Conread position: 38-261
Cow position: chr5:56549370-56549599 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 158
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 33, 104

Conread position: 38-269
Cow position: chr5:18062313-18062071 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 163
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 135, 0

Conread position: 39-257
Cow position: chr5:51298705-51298490 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 159
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 59, 0

Conread position: 40-264
Cow position: chr5:36868745-36868971 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 157
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 115, 86

Conread position: 41-264
Cow position: chr5:35208273-35208497 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 157
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 146, 59

Conread position: 42-264
Cow position: chr5:64060456-64060679 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 153
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 92, 97

Conread position: 43-191
Cow position: chr5:35647354-35647502 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 109
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 43-228
Cow position: chr5:38168905-38169089 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 148
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 101, 125

Conread position: 43-247
Cow position: chr5:66659520-66659729 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 143
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 90, 96

Conread position: 43-250
Cow position: chr5:60948144-60948350 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 157
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 55, 0

Conread position: 43-257
Cow position: chr5:17828468-17828252 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 148
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 87, 97

Conread position: 43-285
Cow position: chr5:26497666-26497424 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 167
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 130, 91

Conread position: 43-291
Cow position: chr5:53935536-53935293 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 179
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 92, 17

Conread position: 44-238
Cow position: chr5:46704287-46704094 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 146
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 126, 0

Conread position: 44-264
Cow position: chr5:60212596-60212822 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 154
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 42, 104

Conread position: 44-266
Cow position: chr5:28681505-28681280 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 152
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 120, 103

Conread position: 44-268
Cow position: chr5:52137042-52136813 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 159
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 111, 103

Conread position: 44-269
Cow position: chr5:4120037-4120269 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 161
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 117, 103

Conread position: 44-280
Cow position: chr5:55942367-55942129 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 174
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 129, 0

Conread position: 45-245
Cow position: chr5:12351794-12351599 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 152
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 188, 102

Conread position: 45-248
Cow position: chr5:3743335-3743542 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 145
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 120, 0

Conread position: 45-253
Cow position: chr5:75228186-75227992 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 152
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 114, 0

Conread position: 45-259
Cow position: chr5:16893758-16893551 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 161
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 114, 0

Conread position: 45-262
Cow position: chr5:2240976-2240759 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 166
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 128, 35

Conread position: 45-262
Cow position: chr5:51247118-51246907 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 158
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 78, 123

Conread position: 45-263
Cow position: chr5:52852984-52853199 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 155
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 206, 101

Conread position: 45-264
Cow position: chr5:57101509-57101294 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 152
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 48, 0

Conread position: 45-265
Cow position: chr5:71788706-71788926 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 162
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 90, 109

Conread position: 45-283
Cow position: chr5:66972442-66972678 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 163
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 142, 169

Conread position: 45-289
Cow position: chr5:73167998-73167759 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 159
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 113, 0

Conread position: 46-250
Cow position: chr5:55176909-55177098 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 147
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 47-264
Cow position: chr5:26147606-26147826 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 171
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 200, 120

Conread position: 47-264
Cow position: chr5:47743643-47743853 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 151
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 76, 0

Conread position: 47-270
Cow position: chr5:12557274-12557049 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 157
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 31, 0

Conread position: 48-263
Cow position: chr5:28814931-28814717 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 148
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 107, 35

Conread position: 48-264
Cow position: chr5:26167437-26167656 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 159
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 193, 119

Conread position: 48-268
Cow position: chr5:35247096-35246869 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 163
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 29, 0

Conread position: 50-267
Cow position: chr5:54312619-54312838 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 158
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 197, 0

Conread position: 51-253
Cow position: chr5:74039984-74039785 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 145
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 95, 0

Conread position: 51-257
Cow position: chr5:19079271-19079468 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 146
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 82, 0

Conread position: 53-244
Cow position: chr5:38040543-38040356 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 137
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 93, 0

Conread position: 53-264
Cow position: chr5:41884940-41885146 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 147
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 7, 19

Conread position: 55-259
Cow position: chr5:63173021-63172820 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 146
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 7, 29

Conread position: 56-250
Cow position: chr5:75760250-75760050 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 142
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 107, 42

Conread position: 56-257
Cow position: chr5:35190134-35190331 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 154
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 111, 0

Conread position: 56-262
Cow position: chr5:37842255-37842049 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 154
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 133, 110

Conread position: 56-262
Cow position: chr5:51289567-51289371 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 153
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 41, 0

Conread position: 56-268
Cow position: chr5:57497403-57497188 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 155
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 13, 122

Conread position: 57-204
Cow position: chr5:51490577-51490429 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 107
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 135, 0

Conread position: 57-268
Cow position: chr5:6438996-6438786 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 162
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 197, 28

Conread position: 58-231
Cow position: chr5:694890-695063 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 130
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 92, 39

Conread position: 58-260
Cow position: chr5:34288224-34288026 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 157
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 39, 0

Conread position: 60-246
Cow position: chr5:50087797-50087982 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 139
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 9, 34

Conread position: 60-284
Cow position: chr5:1694060-1693837 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 162
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 192, 107

Conread position: 61-253
Cow position: chr5:44734696-44734506 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 139
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 98, 0

Conread position: 61-255
Cow position: chr5:16668726-16668916 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 143
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 98, 0

Conread position: 61-264
Cow position: chr5:49821457-49821663 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 147
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 116, 0

Conread position: 61-266
Cow position: chr5:6086314-6086107 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 143
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 22, 115

Conread position: 63-253
Cow position: chr5:3677754-3677949 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 142
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 128, 37

Conread position: 63-266
Cow position: chr5:56433911-56434119 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 144
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 12, 43

Conread position: 63-296
Cow position: chr5:14167873-14168108 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 168
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 7, 29

Conread position: 63-301
Cow position: chr5:15991608-15991368 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 177
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 189, 89

Conread position: 64-257
Cow position: chr5:56525681-56525485 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 141
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 13, 81

Conread position: 66-264
Cow position: chr5:62995991-62996193 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 144
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 69, 74

Conread position: 67-279
Cow position: chr5:29895206-29895420 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 150
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 188, 0

Conread position: 71-257
Cow position: chr5:12562721-12562535 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 138
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 42, 79

Conread position: 71-268
Cow position: chr5:8736240-8736041 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 151
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 88, 37

Conread position: 73-253
Cow position: chr5:35394392-35394218 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 100, 0

Conread position: 73-262
Cow position: chr5:3817646-3817456 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 135
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 179, 0

Conread position: 74-244
Cow position: chr5:60741286-60741457 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 124
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 81, 73

Conread position: 74-264
Cow position: chr5:6876926-6876733 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 143
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 53, 32

Conread position: 74-268
Cow position: chr5:40122568-40122372 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 140
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 81, 72

Conread position: 77-215
Cow position: chr5:60126735-60126879 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 96, 0

Conread position: 77-256
Cow position: chr5:31648465-31648639 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 127
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 77-269
Cow position: chr5:32064937-32064744 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 140
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 70, 37

Conread position: 78-246
Cow position: chr5:65745719-65745554 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 123
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 68, 0

Conread position: 78-285
Cow position: chr5:55162672-55162875 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 147
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 77, 69

Conread position: 79-268
Cow position: chr5:55041256-55041450 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 136
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 83, 68

Conread position: 80-264
Cow position: chr5:38683551-38683738 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 133
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 107, 65

Conread position: 80-280
Cow position: chr5:30221730-30221526 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 147
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 55, 64

Conread position: 83-259
Cow position: chr5:74887849-74887671 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 110, 86

Conread position: 83-261
Cow position: chr5:60207759-60207934 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 76, 0

Conread position: 83-264
Cow position: chr5:67339934-67340114 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 137
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 168, 84

Conread position: 85-259
Cow position: chr5:21721417-21721247 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 167, 82

Conread position: 85-262
Cow position: chr5:66286998-66287171 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 134
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 84, 0

Conread position: 88-253
Cow position: chr5:74065461-74065299 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 64, 0

Conread position: 88-258
Cow position: chr5:60100526-60100689 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 128
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 161, 58

Conread position: 88-258
Cow position: chr5:60153831-60153994 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 128
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 161, 58

Conread position: 88-261
Cow position: chr5:49207271-49207100 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 134
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 79, 0

Conread position: 88-262
Cow position: chr5:37253485-37253654 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 164, 73

Conread position: 88-264
Cow position: chr5:29599490-29599317 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 164, 79

Conread position: 88-264
Cow position: chr5:34918402-34918575 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 138
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 81, 0

Conread position: 88-264
Cow position: chr5:40531482-40531300 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 132
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 43, 5

Conread position: 89-265
Cow position: chr5:58401626-58401800 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 128
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 163, 78

Conread position: 90-250
Cow position: chr5:64843913-64843747 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 83, 0

Conread position: 90-280
Cow position: chr5:52211629-52211441 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 139
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 162, 69

Conread position: 93-250
Cow position: chr5:34787635-34787790 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 124
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 74, 0

Conread position: 93-284
Cow position: chr5:25462149-25462342 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 144
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 155, 75

Conread position: 94-259
Cow position: chr5:57447604-57447437 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 122
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 62, 42

Conread position: 94-263
Cow position: chr5:46479180-46479015 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 124
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 158, 73

Conread position: 94-268
Cow position: chr5:56477268-56477442 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 120
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 98-220
Cow position: chr5:52192363-52192245 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 77, 0

Conread position: 98-263
Cow position: chr5:6245597-6245434 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 127
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 69, 0

Conread position: 98-270
Cow position: chr5:19294460-19294281 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 127
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 61, 0

Conread position: 98-270
Cow position: chr5:75478849-75478681 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 122
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 61, 0

Conread position: 98-289
Cow position: chr5:5030509-5030700 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 147
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 154, 13

Conread position: 98-294
Cow position: chr5:52849151-52849347 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 144
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 127, 69

Conread position: 99-265
Cow position: chr5:63300145-63300311 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 121
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 99-269
Cow position: chr5:9559488-9559648 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 60, 0

Conread position: 100-253
Cow position: chr5:4824216-4824374 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 20, 0

Conread position: 101-257
Cow position: chr5:69765965-69765809 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 111
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 101-270
Cow position: chr5:32975827-32976002 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 136
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 71, 131

Conread position: 102-247
Cow position: chr5:12504720-12504579 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 61, 0

Conread position: 102-255
Cow position: chr5:24108990-24108835 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 114
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 60, 50

Conread position: 102-264
Cow position: chr5:47960191-47960030 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 130
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 155, 57

Conread position: 105-259
Cow position: chr5:19626651-19626803 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 64, 0

Conread position: 105-266
Cow position: chr5:64061092-64061247 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 63, 0

Conread position: 111-289
Cow position: chr5:28660309-28660488 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 126
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 62, 0

Conread position: 112-264
Cow position: chr5:34639202-34639356 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 44, 0

Conread position: 112-264
Cow position: chr5:47335108-47335262 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 117, 63

Conread position: 112-294
Cow position: chr5:17537593-17537416 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 128
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 137, 61

Conread position: 112-319
Cow position: chr5:56624437-56624229 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 148
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 68, 57

Conread position: 114-285
Cow position: chr5:3627095-3626926 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 124
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 134, 31

Conread position: 115-263
Cow position: chr5:48104344-48104491 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 117
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 26, 55

Conread position: 115-267
Cow position: chr5:18578975-18579125 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 114
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 39, 55

Conread position: 118-257
Cow position: chr5:74049910-74050049 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 110
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 138-259
Cow position: chr5:74690148-74690024 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 148-262
Cow position: chr5:55414323-55414210 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 90
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 13, 0

Show alignments to all cow chromosomes.