Cow genome map
| Conread name: | rrec01_f6.y1 |
| Conread position: | 1-109 |
| Cow position: | chr13:6945872-6945759 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 94 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 1-110 |
| Cow position: | chr13:15288417-15288525 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 69, 75 |
| Conread position: | 1-110 |
| Cow position: | chr13:37520869-37520980 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 90 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 1-110 |
| Cow position: | chr13:46297974-46298083 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 90 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 69, 46 |
| Conread position: | 1-110 |
| Cow position: | chr13:51527966-51528077 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 89 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 1-110 |
| Cow position: | chr13:61976486-61976597 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 89 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 1-125 |
| Cow position: | chr13:24405187-24405062 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 95 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 1-125 |
| Cow position: | chr13:34994450-34994571 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 98 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 67, 29 |
| Conread position: | 1-130 |
| Cow position: | chr13:2559404-2559273 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 103 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 1-130 |
| Cow position: | chr13:3015686-3015816 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 1-130 |
| Cow position: | chr13:11290330-11290460 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 103 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 49, 43 |
| Conread position: | 1-130 |
| Cow position: | chr13:11316060-11316192 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 1-130 |
| Cow position: | chr13:15946016-15945886 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 1-131 |
| Cow position: | chr13:9803544-9803413 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 1-131 |
| Cow position: | chr13:16243720-16243593 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 69, 30 |
| Conread position: | 1-131 |
| Cow position: | chr13:21402309-21402439 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 73, 69 |
| Conread position: | 1-131 |
| Cow position: | chr13:23444325-23444455 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 69, 115 |
| Conread position: | 1-131 |
| Cow position: | chr13:23586649-23586514 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 108 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 1-131 |
| Cow position: | chr13:26382740-26382874 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 1-131 |
| Cow position: | chr13:30034838-30034707 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 99 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 1-131 |
| Cow position: | chr13:33631640-33631509 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 102 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 1-131 |
| Cow position: | chr13:33976149-33976018 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 101 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 1-131 |
| Cow position: | chr13:37461222-37461353 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 1-131 |
| Cow position: | chr13:38013159-38013028 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 100 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 1-131 |
| Cow position: | chr13:40722203-40722333 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 101 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 67, 93 |
| Conread position: | 1-131 |
| Cow position: | chr13:46284108-46284241 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 1-131 |
| Cow position: | chr13:46465708-46465576 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 1-131 |
| Cow position: | chr13:60695313-60695183 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 99 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 69, 39 |
| Conread position: | 2-109 |
| Cow position: | chr13:41360318-41360210 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 91 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 2-131 |
| Cow position: | chr13:14104355-14104485 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 2-131 |
| Cow position: | chr13:14716854-14716979 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 3-131 |
| Cow position: | chr13:9734428-9734301 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 101 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 67, 113 |
| Conread position: | 5-95 |
| Cow position: | chr13:35718141-35718232 (view UCSC Genome Browser custom track) |
| Alignm length: | 92 |
| Alignm identity: | 80 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 5-125 |
| Cow position: | chr13:32659122-32658999 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 96 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 5-131 |
| Cow position: | chr13:13577150-13577024 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 104 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 65, 97 |
| Conread position: | 5-131 |
| Cow position: | chr13:19108395-19108268 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 65, 71 |
| Conread position: | 5-131 |
| Cow position: | chr13:25882743-25882870 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 99 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 5-131 |
| Cow position: | chr13:60674246-60674372 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 102 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 65, 11 |
| Conread position: | 6-131 |
| Cow position: | chr13:53535821-53535948 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 100 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 7-128 |
| Cow position: | chr13:11767495-11767615 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 97 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 71, 24 |
| Conread position: | 7-131 |
| Cow position: | chr13:23266318-23266192 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 12-131 |
| Cow position: | chr13:12232982-12233102 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 14-131 |
| Cow position: | chr13:18815212-18815094 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 56, 0 |
Show alignments to all cow chromosomes.