Cow genome map
| Conread name: | rrec01_f6.y1 |
| Conread position: | 1-97 |
| Cow position: | chr18:43463952-43463855 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 81 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 1-110 |
| Cow position: | chr18:6829592-6829482 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 90 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 1-110 |
| Cow position: | chr18:7649465-7649575 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 91 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 69, 35 |
| Conread position: | 1-110 |
| Cow position: | chr18:10100925-10101034 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 90 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-110 |
| Cow position: | chr18:33851358-33851467 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 89 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 69, 53 |
| Conread position: | 1-110 |
| Cow position: | chr18:45104955-45104845 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 89 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 1-116 |
| Cow position: | chr18:36122039-36121923 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 95 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 52, 81 |
| Conread position: | 1-125 |
| Cow position: | chr18:31563126-31562998 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 105 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 1-127 |
| Cow position: | chr18:17324193-17324319 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 102 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 69, 39 |
| Conread position: | 1-129 |
| Cow position: | chr18:37334584-37334713 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 101 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 1-130 |
| Cow position: | chr18:22874337-22874469 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 1-130 |
| Cow position: | chr18:25972259-25972129 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 1-130 |
| Cow position: | chr18:30216034-30216162 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 69, 83 |
| Conread position: | 1-131 |
| Cow position: | chr18:4380788-4380919 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 101 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 1-131 |
| Cow position: | chr18:11376837-11376968 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 103 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 1-131 |
| Cow position: | chr18:14778604-14778473 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 99 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 1-131 |
| Cow position: | chr18:21767778-21767647 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 104 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 1-131 |
| Cow position: | chr18:22065895-22065764 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 103 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 1-131 |
| Cow position: | chr18:32860115-32860246 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 101 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 1-131 |
| Cow position: | chr18:38090113-38089984 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 66, 115 |
| Conread position: | 1-131 |
| Cow position: | chr18:44408088-44408225 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 1-131 |
| Cow position: | chr18:48548630-48548759 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 100 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 69, 58 |
| Conread position: | 1-131 |
| Cow position: | chr18:51272320-51272185 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 106 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 1-131 |
| Cow position: | chr18:54031176-54031308 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 2-131 |
| Cow position: | chr18:24293325-24293457 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 106 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 2-131 |
| Cow position: | chr18:32908370-32908500 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 3-130 |
| Cow position: | chr18:10097632-10097762 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 5-120 |
| Cow position: | chr18:42080197-42080080 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 93 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 5-129 |
| Cow position: | chr18:33609711-33609836 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 97 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 5-130 |
| Cow position: | chr18:45614593-45614724 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 102 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 5-131 |
| Cow position: | chr18:249409-249277 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 5-131 |
| Cow position: | chr18:36649198-36649325 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 100 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 5-131 |
| Cow position: | chr18:36907698-36907571 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 100 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 5-131 |
| Cow position: | chr18:36912224-36912097 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 98 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 5-131 |
| Cow position: | chr18:54629321-54629193 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 6-131 |
| Cow position: | chr18:17334922-17334798 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 63, 24 |
| Conread position: | 7-126 |
| Cow position: | chr18:22413186-22413306 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 97 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 60, 108 |
| Conread position: | 7-127 |
| Cow position: | chr18:38341722-38341601 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 97 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 10-131 |
| Cow position: | chr18:41072340-41072465 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 11-131 |
| Cow position: | chr18:29768390-29768511 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 95 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 59, 0 |
Show alignments to all cow chromosomes.