Cow genome map

Conread name: rrec01_f6.y1

Conread position: 1-110
Cow position: chr5:3441979-3442089 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 88
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 67, 0

Conread position: 1-110
Cow position: chr5:26156438-26156327 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 69, 0

Conread position: 1-110
Cow position: chr5:26467152-26467262 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 88
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 69, 0

Conread position: 1-110
Cow position: chr5:31470044-31469934 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 88
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 69, 0

Conread position: 1-110
Cow position: chr5:53835225-53835335 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 88
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 69, 0

Conread position: 1-110
Cow position: chr5:58460875-58460764 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 69, 0

Conread position: 1-123
Cow position: chr5:29843837-29843960 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 67, 32

Conread position: 1-123
Cow position: chr5:57613526-57613405 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 96
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 46, 69

Conread position: 1-125
Cow position: chr5:26376093-26376217 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 68, 112

Conread position: 1-125
Cow position: chr5:72902080-72902204 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 69, 45

Conread position: 1-129
Cow position: chr5:31661635-31661508 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 106
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 69, 50

Conread position: 1-129
Cow position: chr5:31785836-31785965 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 98
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 69, 0

Conread position: 1-130
Cow position: chr5:11955963-11955833 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 99
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 124, 0

Conread position: 1-130
Cow position: chr5:48574248-48574119 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 69, 75

Conread position: 1-130
Cow position: chr5:50206140-50206271 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 69, 52

Conread position: 1-130
Cow position: chr5:69771706-69771838 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 108
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 69, 0

Conread position: 1-131
Cow position: chr5:3439784-3439653 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 69, 0

Conread position: 1-131
Cow position: chr5:4630647-4630779 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 102
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 69, 0

Conread position: 1-131
Cow position: chr5:10109417-10109540 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 69, 0

Conread position: 1-131
Cow position: chr5:15088715-15088844 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 67, 115

Conread position: 1-131
Cow position: chr5:23179594-23179720 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 67, 0

Conread position: 1-131
Cow position: chr5:23641466-23641334 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 112
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 69, 99

Conread position: 1-131
Cow position: chr5:27615026-27615159 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 69, 16

Conread position: 1-131
Cow position: chr5:27656409-27656541 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 46, 0

Conread position: 1-131
Cow position: chr5:29755830-29755963 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 69, 0

Conread position: 1-131
Cow position: chr5:34115172-34115303 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 99
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 69, 0

Conread position: 1-131
Cow position: chr5:35967731-35967862 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 101
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 69, 0

Conread position: 1-131
Cow position: chr5:36406701-36406830 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 113
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 67, 18

Conread position: 1-131
Cow position: chr5:40891972-40891843 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 69, 104

Conread position: 1-131
Cow position: chr5:46104417-46104285 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 102
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 69, 0

Conread position: 1-131
Cow position: chr5:46295142-46295012 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 66, 104

Conread position: 1-131
Cow position: chr5:57125559-57125688 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 101
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 68, 111

Conread position: 1-131
Cow position: chr5:57365543-57365412 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 99
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 69, 0

Conread position: 1-131
Cow position: chr5:58004775-58004900 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 69, 99

Conread position: 1-131
Cow position: chr5:73525857-73525987 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 69, 46

Conread position: 2-110
Cow position: chr5:15455370-15455480 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 2-131
Cow position: chr5:63608036-63607907 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 65, 111

Conread position: 5-116
Cow position: chr5:34638427-34638540 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 62, 0

Conread position: 5-119
Cow position: chr5:13205841-13205726 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 65, 0

Conread position: 5-130
Cow position: chr5:29559865-29559991 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 64, 0

Conread position: 5-130
Cow position: chr5:34232258-34232384 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 65, 71

Conread position: 5-130
Cow position: chr5:37047464-37047590 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 65, 0

Conread position: 5-130
Cow position: chr5:48407052-48406925 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 97
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 65, 0

Conread position: 5-131
Cow position: chr5:14833076-14832949 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 96
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 65, 0

Conread position: 5-131
Cow position: chr5:20779922-20779795 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 63, 0

Conread position: 5-131
Cow position: chr5:33270006-33270137 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 107
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 48, 0

Conread position: 5-131
Cow position: chr5:42044642-42044770 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 42, 0

Conread position: 5-131
Cow position: chr5:49127266-49127393 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 65, 0

Conread position: 5-131
Cow position: chr5:51992875-51993005 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 5-131
Cow position: chr5:72041740-72041867 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 63, 101

Conread position: 7-131
Cow position: chr5:5193947-5194074 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 42, 0

Conread position: 7-131
Cow position: chr5:20808192-20808317 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 96
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 61, 0

Conread position: 7-131
Cow position: chr5:34915705-34915579 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 97
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 7-131
Cow position: chr5:49478860-49478987 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 63, 30

Conread position: 8-131
Cow position: chr5:48971583-48971460 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 96
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.