Cow genome map
Conread name: | rrec01_f6.y1 |
Conread position: | 1-110 |
Cow position: | chr5:3441979-3442089 (view UCSC Genome Browser custom track) |
Alignm length: | 111 |
Alignm identity: | 88 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 67, 0 |
Conread position: | 1-110 |
Cow position: | chr5:26156438-26156327 (view UCSC Genome Browser custom track) |
Alignm length: | 112 |
Alignm identity: | 92 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 69, 0 |
Conread position: | 1-110 |
Cow position: | chr5:26467152-26467262 (view UCSC Genome Browser custom track) |
Alignm length: | 111 |
Alignm identity: | 88 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 69, 0 |
Conread position: | 1-110 |
Cow position: | chr5:31470044-31469934 (view UCSC Genome Browser custom track) |
Alignm length: | 111 |
Alignm identity: | 88 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 69, 0 |
Conread position: | 1-110 |
Cow position: | chr5:53835225-53835335 (view UCSC Genome Browser custom track) |
Alignm length: | 111 |
Alignm identity: | 88 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 69, 0 |
Conread position: | 1-110 |
Cow position: | chr5:58460875-58460764 (view UCSC Genome Browser custom track) |
Alignm length: | 112 |
Alignm identity: | 89 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 69, 0 |
Conread position: | 1-123 |
Cow position: | chr5:29843837-29843960 (view UCSC Genome Browser custom track) |
Alignm length: | 125 |
Alignm identity: | 98 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 67, 32 |
Conread position: | 1-123 |
Cow position: | chr5:57613526-57613405 (view UCSC Genome Browser custom track) |
Alignm length: | 124 |
Alignm identity: | 96 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 46, 69 |
Conread position: | 1-125 |
Cow position: | chr5:26376093-26376217 (view UCSC Genome Browser custom track) |
Alignm length: | 126 |
Alignm identity: | 100 |
Alignm E-value: | 9e-25 |
Alignm gaps (pig, cow): | 68, 112 |
Conread position: | 1-125 |
Cow position: | chr5:72902080-72902204 (view UCSC Genome Browser custom track) |
Alignm length: | 126 |
Alignm identity: | 101 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 69, 45 |
Conread position: | 1-129 |
Cow position: | chr5:31661635-31661508 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 106 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 69, 50 |
Conread position: | 1-129 |
Cow position: | chr5:31785836-31785965 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 98 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 69, 0 |
Conread position: | 1-130 |
Cow position: | chr5:11955963-11955833 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 99 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 124, 0 |
Conread position: | 1-130 |
Cow position: | chr5:48574248-48574119 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 103 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 69, 75 |
Conread position: | 1-130 |
Cow position: | chr5:50206140-50206271 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 104 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 69, 52 |
Conread position: | 1-130 |
Cow position: | chr5:69771706-69771838 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 108 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 69, 0 |
Conread position: | 1-131 |
Cow position: | chr5:3439784-3439653 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 104 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 69, 0 |
Conread position: | 1-131 |
Cow position: | chr5:4630647-4630779 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 102 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 69, 0 |
Conread position: | 1-131 |
Cow position: | chr5:10109417-10109540 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 101 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 69, 0 |
Conread position: | 1-131 |
Cow position: | chr5:15088715-15088844 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 103 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 67, 115 |
Conread position: | 1-131 |
Cow position: | chr5:23179594-23179720 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 101 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 67, 0 |
Conread position: | 1-131 |
Cow position: | chr5:23641466-23641334 (view UCSC Genome Browser custom track) |
Alignm length: | 134 |
Alignm identity: | 112 |
Alignm E-value: | 6e-31 |
Alignm gaps (pig, cow): | 69, 99 |
Conread position: | 1-131 |
Cow position: | chr5:27615026-27615159 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 106 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 69, 16 |
Conread position: | 1-131 |
Cow position: | chr5:27656409-27656541 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 105 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 1-131 |
Cow position: | chr5:29755830-29755963 (view UCSC Genome Browser custom track) |
Alignm length: | 134 |
Alignm identity: | 104 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 69, 0 |
Conread position: | 1-131 |
Cow position: | chr5:34115172-34115303 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 99 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 69, 0 |
Conread position: | 1-131 |
Cow position: | chr5:35967731-35967862 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 101 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 69, 0 |
Conread position: | 1-131 |
Cow position: | chr5:36406701-36406830 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 113 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 67, 18 |
Conread position: | 1-131 |
Cow position: | chr5:40891972-40891843 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 103 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 69, 104 |
Conread position: | 1-131 |
Cow position: | chr5:46104417-46104285 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 102 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 69, 0 |
Conread position: | 1-131 |
Cow position: | chr5:46295142-46295012 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 102 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 66, 104 |
Conread position: | 1-131 |
Cow position: | chr5:57125559-57125688 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 101 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 68, 111 |
Conread position: | 1-131 |
Cow position: | chr5:57365543-57365412 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 99 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 69, 0 |
Conread position: | 1-131 |
Cow position: | chr5:58004775-58004900 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 103 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 69, 99 |
Conread position: | 1-131 |
Cow position: | chr5:73525857-73525987 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 105 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 69, 46 |
Conread position: | 2-110 |
Cow position: | chr5:15455370-15455480 (view UCSC Genome Browser custom track) |
Alignm length: | 111 |
Alignm identity: | 89 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 59, 0 |
Conread position: | 2-131 |
Cow position: | chr5:63608036-63607907 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 104 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 65, 111 |
Conread position: | 5-116 |
Cow position: | chr5:34638427-34638540 (view UCSC Genome Browser custom track) |
Alignm length: | 114 |
Alignm identity: | 91 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 62, 0 |
Conread position: | 5-119 |
Cow position: | chr5:13205841-13205726 (view UCSC Genome Browser custom track) |
Alignm length: | 116 |
Alignm identity: | 92 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 65, 0 |
Conread position: | 5-130 |
Cow position: | chr5:29559865-29559991 (view UCSC Genome Browser custom track) |
Alignm length: | 127 |
Alignm identity: | 101 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 64, 0 |
Conread position: | 5-130 |
Cow position: | chr5:34232258-34232384 (view UCSC Genome Browser custom track) |
Alignm length: | 128 |
Alignm identity: | 100 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 65, 71 |
Conread position: | 5-130 |
Cow position: | chr5:37047464-37047590 (view UCSC Genome Browser custom track) |
Alignm length: | 127 |
Alignm identity: | 99 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 65, 0 |
Conread position: | 5-130 |
Cow position: | chr5:48407052-48406925 (view UCSC Genome Browser custom track) |
Alignm length: | 128 |
Alignm identity: | 97 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 65, 0 |
Conread position: | 5-131 |
Cow position: | chr5:14833076-14832949 (view UCSC Genome Browser custom track) |
Alignm length: | 128 |
Alignm identity: | 96 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 65, 0 |
Conread position: | 5-131 |
Cow position: | chr5:20779922-20779795 (view UCSC Genome Browser custom track) |
Alignm length: | 128 |
Alignm identity: | 99 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 63, 0 |
Conread position: | 5-131 |
Cow position: | chr5:33270006-33270137 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 107 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 5-131 |
Cow position: | chr5:42044642-42044770 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 100 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 5-131 |
Cow position: | chr5:49127266-49127393 (view UCSC Genome Browser custom track) |
Alignm length: | 128 |
Alignm identity: | 102 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 65, 0 |
Conread position: | 5-131 |
Cow position: | chr5:51992875-51993005 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 100 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 50, 0 |
Conread position: | 5-131 |
Cow position: | chr5:72041740-72041867 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 100 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 63, 101 |
Conread position: | 7-131 |
Cow position: | chr5:5193947-5194074 (view UCSC Genome Browser custom track) |
Alignm length: | 128 |
Alignm identity: | 101 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 7-131 |
Cow position: | chr5:20808192-20808317 (view UCSC Genome Browser custom track) |
Alignm length: | 126 |
Alignm identity: | 96 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 61, 0 |
Conread position: | 7-131 |
Cow position: | chr5:34915705-34915579 (view UCSC Genome Browser custom track) |
Alignm length: | 127 |
Alignm identity: | 97 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 7-131 |
Cow position: | chr5:49478860-49478987 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 101 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 63, 30 |
Conread position: | 8-131 |
Cow position: | chr5:48971583-48971460 (view UCSC Genome Browser custom track) |
Alignm length: | 124 |
Alignm identity: | 96 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.