Cow genome map
| Conread name: | rrec01_f6.y1 |
| Conread position: | 1-93 |
| Cow position: | chr7:34198854-34198947 (view UCSC Genome Browser custom track) |
| Alignm length: | 94 |
| Alignm identity: | 82 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 1-96 |
| Cow position: | chr7:34553790-34553887 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 83 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 1-97 |
| Cow position: | chr7:9928874-9928777 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 81 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 1-97 |
| Cow position: | chr7:29509519-29509616 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 81 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 1-97 |
| Cow position: | chr7:58302399-58302302 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 81 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 1-110 |
| Cow position: | chr7:31171401-31171290 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 89 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 1-110 |
| Cow position: | chr7:32824704-32824594 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 90 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 1-117 |
| Cow position: | chr7:28918379-28918496 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 92 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 1-117 |
| Cow position: | chr7:41120675-41120558 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 91 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 1-123 |
| Cow position: | chr7:10634989-10635114 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 99 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 1-125 |
| Cow position: | chr7:35753261-35753136 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 95 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 1-125 |
| Cow position: | chr7:45748342-45748217 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 95 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 1-125 |
| Cow position: | chr7:59713014-59713139 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 97 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 1-128 |
| Cow position: | chr7:36128536-36128665 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 1-129 |
| Cow position: | chr7:10346206-10346078 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 69, 104 |
| Conread position: | 1-129 |
| Cow position: | chr7:14079665-14079538 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 102 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 68, 99 |
| Conread position: | 1-129 |
| Cow position: | chr7:23229069-23229198 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 102 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 1-129 |
| Cow position: | chr7:23257311-23257182 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 98 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 1-129 |
| Cow position: | chr7:45099078-45099207 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 97 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 1-129 |
| Cow position: | chr7:52752352-52752223 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 97 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 1-130 |
| Cow position: | chr7:24666070-24666200 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 107 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 1-130 |
| Cow position: | chr7:34412741-34412611 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 100 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 59, 76 |
| Conread position: | 1-131 |
| Cow position: | chr7:10760313-10760188 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 69, 99 |
| Conread position: | 1-131 |
| Cow position: | chr7:11870286-11870155 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 69, 113 |
| Conread position: | 1-131 |
| Cow position: | chr7:19051764-19051634 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 70, 59 |
| Conread position: | 1-131 |
| Cow position: | chr7:20225291-20225160 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 1-131 |
| Cow position: | chr7:20289711-20289580 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 1-131 |
| Cow position: | chr7:23681844-23681713 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 101 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 1-131 |
| Cow position: | chr7:26196246-26196118 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 69, 112 |
| Conread position: | 1-131 |
| Cow position: | chr7:29378577-29378446 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 102 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 1-131 |
| Cow position: | chr7:32265419-32265550 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 1-131 |
| Cow position: | chr7:32277076-32277207 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 1-131 |
| Cow position: | chr7:33810209-33810340 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 102 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 1-131 |
| Cow position: | chr7:34568708-34568838 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-131 |
| Cow position: | chr7:36477394-36477525 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 103 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 1-131 |
| Cow position: | chr7:38145120-38144989 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 103 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 1-131 |
| Cow position: | chr7:39498475-39498345 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 69, 51 |
| Conread position: | 1-131 |
| Cow position: | chr7:40991241-40991370 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 67, 115 |
| Conread position: | 1-131 |
| Cow position: | chr7:43214567-43214698 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 1-131 |
| Cow position: | chr7:43940885-43941013 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 69, 32 |
| Conread position: | 1-131 |
| Cow position: | chr7:47173301-47173170 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 101 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 1-131 |
| Cow position: | chr7:47876239-47876109 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 103 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 69, 45 |
| Conread position: | 1-131 |
| Cow position: | chr7:48407313-48407182 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 98 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 1-131 |
| Cow position: | chr7:48626479-48626609 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 104 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 69, 10 |
| Conread position: | 1-131 |
| Cow position: | chr7:48815168-48815301 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 1-131 |
| Cow position: | chr7:56671434-56671303 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 98 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 1-131 |
| Cow position: | chr7:61762901-61763032 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 99 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 2-130 |
| Cow position: | chr7:59245192-59245320 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 100 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 68, 51 |
| Conread position: | 2-131 |
| Cow position: | chr7:13822070-13822199 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 68, 103 |
| Conread position: | 5-117 |
| Cow position: | chr7:19881729-19881617 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 92 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 65, 42 |
| Conread position: | 5-129 |
| Cow position: | chr7:33063140-33063015 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 98 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 5-131 |
| Cow position: | chr7:268540-268667 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 97 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 5-131 |
| Cow position: | chr7:21197803-21197678 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 101 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 65, 87 |
| Conread position: | 5-131 |
| Cow position: | chr7:27388434-27388307 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 65, 109 |
| Conread position: | 5-131 |
| Cow position: | chr7:34245075-34245202 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 100 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 5-131 |
| Cow position: | chr7:36745863-36745990 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 101 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 5-131 |
| Cow position: | chr7:39451564-39451437 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 98 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 5-131 |
| Cow position: | chr7:47771429-47771302 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 5-131 |
| Cow position: | chr7:58719038-58719168 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 5-131 |
| Cow position: | chr7:60574571-60574698 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 100 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 5-131 |
| Cow position: | chr7:68587941-68588069 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 6-130 |
| Cow position: | chr7:12414012-12413887 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 95 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 7-130 |
| Cow position: | chr7:1261573-1261697 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 102 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 16, 108 |
| Conread position: | 7-131 |
| Cow position: | chr7:49714385-49714510 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 99 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 10-131 |
| Cow position: | chr7:22137541-22137419 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 17-129 |
| Cow position: | chr7:18857875-18857988 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 91 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 27-131 |
| Cow position: | chr7:7096478-7096373 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 85 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 43, 0 |
Show alignments to all cow chromosomes.