Cow genome map
Conread name: | rrec01_f6.y1 |
Conread position: | 1-97 |
Cow position: | chr9:12356381-12356284 (view UCSC Genome Browser custom track) |
Alignm length: | 98 |
Alignm identity: | 81 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 63, 0 |
Conread position: | 1-109 |
Cow position: | chr9:42901826-42901717 (view UCSC Genome Browser custom track) |
Alignm length: | 110 |
Alignm identity: | 89 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 69, 0 |
Conread position: | 1-110 |
Cow position: | chr9:4929145-4929034 (view UCSC Genome Browser custom track) |
Alignm length: | 112 |
Alignm identity: | 89 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 44, 0 |
Conread position: | 1-110 |
Cow position: | chr9:6089628-6089517 (view UCSC Genome Browser custom track) |
Alignm length: | 112 |
Alignm identity: | 90 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 69, 0 |
Conread position: | 1-110 |
Cow position: | chr9:29184613-29184722 (view UCSC Genome Browser custom track) |
Alignm length: | 110 |
Alignm identity: | 86 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-110 |
Cow position: | chr9:35129349-35129238 (view UCSC Genome Browser custom track) |
Alignm length: | 112 |
Alignm identity: | 90 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 67, 0 |
Conread position: | 1-128 |
Cow position: | chr9:23527350-23527478 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 103 |
Alignm E-value: | 8e-25 |
Alignm gaps (pig, cow): | 46, 100 |
Conread position: | 1-129 |
Cow position: | chr9:1429333-1429206 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 100 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 24, 0 |
Conread position: | 1-129 |
Cow position: | chr9:44553303-44553172 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 105 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 1-130 |
Cow position: | chr9:34568260-34568392 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 106 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 68, 0 |
Conread position: | 1-130 |
Cow position: | chr9:42172340-42172467 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 105 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 69, 98 |
Conread position: | 1-131 |
Cow position: | chr9:2910619-2910490 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 105 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 66, 54 |
Conread position: | 1-131 |
Cow position: | chr9:5518085-5518216 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 102 |
Alignm E-value: | 8e-25 |
Alignm gaps (pig, cow): | 69, 0 |
Conread position: | 1-131 |
Cow position: | chr9:9957569-9957438 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 103 |
Alignm E-value: | 9e-26 |
Alignm gaps (pig, cow): | 69, 0 |
Conread position: | 1-131 |
Cow position: | chr9:12184347-12184216 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 98 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 69, 0 |
Conread position: | 1-131 |
Cow position: | chr9:15006252-15006383 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 101 |
Alignm E-value: | 7e-24 |
Alignm gaps (pig, cow): | 69, 0 |
Conread position: | 1-131 |
Cow position: | chr9:27085994-27085863 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 104 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 70, 51 |
Conread position: | 1-131 |
Cow position: | chr9:28948384-28948253 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 101 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 42, 105 |
Conread position: | 1-131 |
Cow position: | chr9:28984097-28983969 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 101 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 69, 87 |
Conread position: | 1-131 |
Cow position: | chr9:34310567-34310434 (view UCSC Genome Browser custom track) |
Alignm length: | 134 |
Alignm identity: | 102 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 69, 0 |
Conread position: | 1-131 |
Cow position: | chr9:41932599-41932468 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 107 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 69, 99 |
Conread position: | 1-131 |
Cow position: | chr9:42628153-42628284 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 99 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 69, 0 |
Conread position: | 1-131 |
Cow position: | chr9:47926434-47926305 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 104 |
Alignm E-value: | 8e-25 |
Alignm gaps (pig, cow): | 69, 58 |
Conread position: | 1-131 |
Cow position: | chr9:48773855-48773724 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 107 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 69, 105 |
Conread position: | 1-131 |
Cow position: | chr9:51929222-51929094 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 103 |
Alignm E-value: | 9e-26 |
Alignm gaps (pig, cow): | 113, 0 |
Conread position: | 1-131 |
Cow position: | chr9:53531315-53531446 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 101 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 69, 75 |
Conread position: | 1-131 |
Cow position: | chr9:55365438-55365310 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 100 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 65, 0 |
Conread position: | 1-131 |
Cow position: | chr9:56253454-56253326 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 107 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 67, 112 |
Conread position: | 1-131 |
Cow position: | chr9:56746522-56746651 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 100 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 50, 68 |
Conread position: | 1-131 |
Cow position: | chr9:61130497-61130626 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 105 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 111, 0 |
Conread position: | 2-108 |
Cow position: | chr9:44218464-44218573 (view UCSC Genome Browser custom track) |
Alignm length: | 110 |
Alignm identity: | 90 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 2-131 |
Cow position: | chr9:44579602-44579472 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 101 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 76, 0 |
Conread position: | 4-120 |
Cow position: | chr9:35371167-35371051 (view UCSC Genome Browser custom track) |
Alignm length: | 118 |
Alignm identity: | 92 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 66, 56 |
Conread position: | 5-110 |
Cow position: | chr9:37017405-37017299 (view UCSC Genome Browser custom track) |
Alignm length: | 107 |
Alignm identity: | 86 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 65, 0 |
Conread position: | 5-130 |
Cow position: | chr9:4859071-4858944 (view UCSC Genome Browser custom track) |
Alignm length: | 128 |
Alignm identity: | 102 |
Alignm E-value: | 9e-26 |
Alignm gaps (pig, cow): | 65, 0 |
Conread position: | 5-130 |
Cow position: | chr9:32688244-32688370 (view UCSC Genome Browser custom track) |
Alignm length: | 128 |
Alignm identity: | 99 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 65, 32 |
Conread position: | 5-131 |
Cow position: | chr9:1280560-1280686 (view UCSC Genome Browser custom track) |
Alignm length: | 128 |
Alignm identity: | 98 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 64, 42 |
Conread position: | 5-131 |
Cow position: | chr9:2113239-2113367 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 101 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 50, 96 |
Conread position: | 5-131 |
Cow position: | chr9:3075763-3075888 (view UCSC Genome Browser custom track) |
Alignm length: | 128 |
Alignm identity: | 102 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 65, 80 |
Conread position: | 5-131 |
Cow position: | chr9:26124303-26124430 (view UCSC Genome Browser custom track) |
Alignm length: | 128 |
Alignm identity: | 102 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 65, 0 |
Conread position: | 5-131 |
Cow position: | chr9:34092885-34093011 (view UCSC Genome Browser custom track) |
Alignm length: | 128 |
Alignm identity: | 101 |
Alignm E-value: | 8e-25 |
Alignm gaps (pig, cow): | 63, 102 |
Conread position: | 5-131 |
Cow position: | chr9:58615068-58614947 (view UCSC Genome Browser custom track) |
Alignm length: | 128 |
Alignm identity: | 101 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 63, 92 |
Conread position: | 5-131 |
Cow position: | chr9:58854360-58854236 (view UCSC Genome Browser custom track) |
Alignm length: | 128 |
Alignm identity: | 99 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 65, 95 |
Conread position: | 6-131 |
Cow position: | chr9:20988921-20989048 (view UCSC Genome Browser custom track) |
Alignm length: | 128 |
Alignm identity: | 97 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 8, 0 |
Conread position: | 11-131 |
Cow position: | chr9:5030306-5030184 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 101 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 59, 0 |
Conread position: | 12-131 |
Cow position: | chr9:38032613-38032737 (view UCSC Genome Browser custom track) |
Alignm length: | 125 |
Alignm identity: | 98 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 44, 0 |
Conread position: | 13-130 |
Cow position: | chr9:49458516-49458634 (view UCSC Genome Browser custom track) |
Alignm length: | 119 |
Alignm identity: | 92 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 56, 0 |
Conread position: | 17-117 |
Cow position: | chr9:35357420-35357521 (view UCSC Genome Browser custom track) |
Alignm length: | 102 |
Alignm identity: | 84 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 53, 0 |
Show alignments to all cow chromosomes.